CX295140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295140 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.585e-48 Identity = 89/106 (83.96%), Postives = 99/106 (93.40%), Query Frame = 3 Query: 15 IFKWTSLMIPPLTIIMVNLIAIAVAVSRTIYSAEPQWSQLVGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAVCISLLWVAINPPSGTTQIGGSFQFP 332 I KWTSLMIPP+TI+MVNLIAIAV SRTIYS PQWS+L+GGVFFSFWVLAHLYPFAKGLMGRRG+TPTIV+VWSGL+A+ ISLLWVAINPP+G+TQIGGSF FP Sbjct: 1040 IVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGSTQIGGSFTFP 1145
BLAST of CX295140 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 6.023e-48 Identity = 87/104 (83.65%), Postives = 97/104 (93.27%), Query Frame = 3 Query: 21 KWTSLMIPPLTIIMVNLIAIAVAVSRTIYSAEPQWSQLVGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAVCISLLWVAINPPSGTTQIGGSFQFP 332 KWTSLMIPP+TIIMVNLIAIAV SRTIYS PQWS+L+GGVFFSFWVLAHLYPFAKGLMGRRG+TPTIV+VWSGL+A+ ISLLWVAINPP+G T+IGG+F FP Sbjct: 1042 KWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINPPAGNTEIGGNFSFP 1145
BLAST of CX295140 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 3.904e-47 Identity = 89/106 (83.96%), Postives = 96/106 (90.57%), Query Frame = 3 Query: 15 IFKWTSLMIPPLTIIMVNLIAIAVAVSRTIYSAEPQWSQLVGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAVCISLLWVAINPPSGTTQIGGSFQFP 332 I KWTSLMIPP+ I+MVNLIAIAV SRTIYS PQWS+L+GGVFFSFWVLAHLYPFAKGLMGRRG+TPTIVFVWSGLLA+ ISLLWVAINPPS +QIGGSF FP Sbjct: 1065 IVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINPPSQNSQIGGSFTFP 1170
BLAST of CX295140 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 3.904e-47 Identity = 89/106 (83.96%), Postives = 96/106 (90.57%), Query Frame = 3 Query: 15 IFKWTSLMIPPLTIIMVNLIAIAVAVSRTIYSAEPQWSQLVGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAVCISLLWVAINPPSGTTQIGGSFQFP 332 I KWTSLMIPP+ I+MVNLIAIAV SRTIYS PQWS+L+GGVFFSFWVLAHLYPFAKGLMGRRG+TPTIVFVWSGLLA+ ISLLWVAINPPS +QIGGSF FP Sbjct: 1065 IVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINPPSQNSQIGGSFTFP 1170
BLAST of CX295140 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 6.233e-45 Identity = 84/106 (79.25%), Postives = 95/106 (89.62%), Query Frame = 3 Query: 21 KWTSLMIPPLTIIMVNLIAIAVAVSRTIYSAEPQWSQLVGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAVCISLLWVAINPPS--GTTQIGGSFQFP 332 KWTSLMIPPLTIIM+NL+AIAV SRTIYS PQWS+L+GGVFFSFWVLAHLYPFAKGLMGRRG+TPTIV+VWSGL+A+ ISLLW+AI PPS +Q+GGSF FP Sbjct: 1022 KWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKPPSAQANSQLGGSFSFP 1127
BLAST of CX295140 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 6.233e-45 Identity = 84/106 (79.25%), Postives = 95/106 (89.62%), Query Frame = 3 Query: 21 KWTSLMIPPLTIIMVNLIAIAVAVSRTIYSAEPQWSQLVGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAVCISLLWVAINPPS--GTTQIGGSFQFP 332 KWTSLMIPPLTIIM+NL+AIAV SRTIYS PQWS+L+GGVFFSFWVLAHLYPFAKGLMGRRG+TPTIV+VWSGL+A+ ISLLW+AI PPS +Q+GGSF FP Sbjct: 1022 KWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKPPSAQANSQLGGSFSFP 1127
BLAST of CX295140 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.201e-41 Identity = 80/111 (72.07%), Postives = 89/111 (80.18%), Query Frame = 3 Query: 15 IFKWTSLMIPPLTIIMVNLIAIAVAVSRTIYSAEPQWSQLVGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAVCISLLWVAINPPSGTTQI-----GGSFQFP 332 I KW+SLMIPP+ I MVN+IAI VA RTIY A PQWS+L+GG FFSFWVLAHLYPFAKGLMGRRGKTPTIVFVW+GL+A+ ISLLW AINP +G GG FQFP Sbjct: 1001 IVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINPNTGPAAAAEGVGGGGFQFP 1111
BLAST of CX295140 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 9.314e-41 Identity = 78/106 (73.58%), Postives = 91/106 (85.85%), Query Frame = 3 Query: 15 IFKWTSLMIPPLTIIMVNLIAIAVAVSRTIYSAEPQWSQLVGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAVCISLLWVAINPPSGTTQIGGSFQFP 332 + KW+ LM+PPLTI+MVN+IAIAV ++RT+YS PQWS+LVGGVFFSFWVL HLYPFAKGLMGRRG+ PTIVFVWSGLL++ +SLLWV INPPSG Q FQFP Sbjct: 1077 VVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINPPSG-KQDYMQFQFP 1181
BLAST of CX295140 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 3.913e-39 Identity = 76/109 (69.72%), Postives = 89/109 (81.65%), Query Frame = 3 Query: 15 IFKWTSLMIPPLTIIMVNLIAIAVAVSRTIYSAEPQWSQLVGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAVCISLLWVAINPPSGTTQ---IGGSFQFP 332 I KW+SL+IPP+TI MVN+IAIA A +RTIYS P+W + +GG FFSFWVLAHL PFAKGLMGRRGKTPTIVFVWSGLL++ +SLLWVAI+PP + GG FQFP Sbjct: 1039 IVKWSSLLIPPITIGMVNIIAIAFAFARTIYSDNPRWGKFIGGGFFSFWVLAHLNPFAKGLMGRRGKTPTIVFVWSGLLSITVSLLWVAISPPEANSNGGARGGGFQFP 1147
BLAST of CX295140 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 6.675e-39 Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 3 Query: 21 KWTSLMIPPLTIIMVNLIAIAVAVSRTIYSAEPQWSQLVGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLLAVCISLLWVAINPPSGTTQI--GGSFQFP 332 +W+ LM+PP+TI+MVN +AIAVA +RT+YS PQWS+L+GG FFSFWVL HLYPFAKGL+GRRG+ PTIVFVWSGL+++ ISLLWV INPP+G + GG F FP Sbjct: 1110 RWSYLMVPPVTIMMVNAVAIAVAAARTLYSEFPQWSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINPPAGARERIGGGGFSFP 1215 The following BLAST results are available for this feature:
BLAST of CX295140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295140 ID=CX295140; Name=CX295140; organism=Citrus clementina; type=EST; length=520bpback to top |