CX295151

Overview
NameCX295151
Unique NameCX295151
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295151 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.655e-37
Identity = 88/183 (48.09%), Postives = 108/183 (59.02%), Query Frame = 3
Query:    3 APGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDPGLIYDLKPTDYIVFLRNIGYTQDQINKIFLPSPDETERTSCPQAHKIPNSFINYPSITVSNLQSTMTIK--RTVKNVG 545
            APG+ +LAAW     PT L SD R V++N  SGTSMSCPHVSG+ AL+KS HP WSPAAIRSALMTTAY        +L   + K S PFD GAGH++P  A +PGLIYDL   DY+ FL  + YT  QI  +           +C  +     + +NYPS  V N+      K  RTV +VG
Sbjct:  508 APGVNILAAWTGAAGPTGLASDSRRVEFNIISGTSMSCPHVSGLAALLKSVHPEWSPAAIRSALMTTAYKTYKDGKPLLDIATGKPSTPFDHGAGHVSPTTATNPGLIYDLTTEDYLGFLCALNYTSPQIRSV------SRRNYTCDPSKSYSVADLNYPSFAV-NVDGVGAYKYTRTVTSVG 683          
BLAST of CX295151 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.607e-24
Identity = 73/217 (33.64%), Postives = 110/217 (50.69%), Query Frame = 3
Query:    6 PGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTAYTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDPGLIYDLKPTDYIVFLRNIGYTQDQINKIFLPSPDETERTSCPQAHKIPNSFINYPS--ITVSNLQS-TMTIKRTVKNVGQKKNAIYFASXXXXXXXXXXXWPRVLVFSWFKER 647
            PG+ +LAAWP   P   +    R+  +N  SGTSMSCPH++G+   +K+ +P WSPAAI+SALMTTA   +   +             F  G+GH+NP+KA+ PGL+YD   +DY+ FL   GY    + +I        + ++C   +      +NYPS  ++VS  Q+      RT+ +V  + +  Y A             P VL F+   +R
Sbjct:  495 PGVEILAAWPSVAP---VGGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNP---------QAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRI------TGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQAST-YRAMISAPQGLTISVNPNVLSFNGLGDR 692          
BLAST of CX295151 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.360e-23
Identity = 78/217 (35.94%), Postives = 111/217 (51.15%), Query Frame = 3
Query:    3 APGIGVLAAWPPNTPPTLLPSDGRSVKWNFQSGTSMSCPHVSGVVALIKSAHPNWSPAAIRSALMTTA--YTRDTSHDSILAGGSMKVSDPFDIGAGHINPMKAMDPGLIYDLKPTDYIVFLRNIGYTQDQINKIFLPSPDETERTSCPQ-AHKIPNSFINYPSITV---SNLQSTMTI-KRTVKNVGQKKNAIYFASXXXXXXXXXXXWPRVLVFS 632
            APGI +LAA+      T L  D +  K+   SGTSM+CPHV+GV A +KS HP+W+PAAI+SA++T+A   +R  + D+            F  G G INP +A  PGL+YD+    Y+ FL   GY     N   L     T   SC      + +  +NYP+I +   S   ST+ + +R V NVG   +++Y A+            P+ L FS
Sbjct:  502 APGIDILAAFTLKRSLTGLDGDTQFSKFTILSGTSMACPHVAGVAAYVKSFHPDWTPAAIKSAIITSAKPISRRVNKDA-----------EFAYGGGQINPRRAASPGLVYDMDDISYVQFLCGEGY-----NATTLAPLVGTRSVSCSSIVPGLGHDSLNYPTIQLTLRSAKTSTLAVFRRRVTNVG-PPSSVYTATVRAPKGVEITVEPQSLSFS 701          
The following BLAST results are available for this feature:
BLAST of CX295151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH1.655e-3748.09Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME1.607e-2433.64Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH1.360e-2335.94Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionC05069B04SK PhIFruit1 Citrus clementina cDNA clone C05069B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295151 ID=CX295151; Name=CX295151; organism=Citrus clementina; type=EST; length=673bp
CAGCTCCTGGAATTGGAGTATTAGCAGCATGGCCTCCCAACACTCCTCCA
ACTCTGTTGCCATCTGATGGGCGGTCAGTGAAGTGGAATTTTCAGTCGGG
GACGTCCATGTCGTGCCCTCATGTCTCCGGAGTTGTTGCTCTAATCAAAT
CGGCTCACCCCAACTGGTCACCTGCTGCCATTCGATCTGCTCTTATGACC
ACAGCTTACACTAGAGACACAAGTCATGACAGTATCTTAGCCGGAGGATC
GATGAAAGTTTCCGATCCCTTCGACATCGGAGCCGGCCACATAAACCCCA
TGAAAGCCATGGATCCTGGTCTCATCTACGACCTAAAACCAACGGACTAC
ATTGTCTTTCTCCGCAACATTGGCTATACACAAGATCAAATTAACAAAAT
TTTTCTTCCCTCTCCTGATGAAACTGAACGCACAAGCTGCCCACAAGCAC
ACAAAATACCCAACTCATTCATAAATTACCCATCGATCACAGTCTCAAAT
CTTCAATCCACAATGACTATCAAAAGGACTGTGAAAAATGTTGGCCAAAA
GAAGAATGCAATTTATTTTGCTAGTGTTGTGAAGCCTGGGGGTGTTGAGG
TCGTGGTTTGGCCTAGGGTTTTGGTTTTTAGCTGGTTTAAAGAGAGGTAT
CGTATTATGTGAGCTTGAAGCCT
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