CX295182

Overview
NameCX295182
Unique NameCX295182
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig624 contig Ccv1_Contig624:1..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX295182 vs. ExPASy Swiss-Prot
Match: M3K1_ARATH (Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 53/142 (37.32%), Postives = 73/142 (51.41%), Query Frame = 2 
Query:  224 LPRFLSPREKSAGKAAMDPRKMRQKPRLERRNAAKHIEYDVAXXXXXXXXXXXXXXXXXXXXXXXXX--TSFRIEGVEGEFERICRSLGLSGPEDFAIPAAAWEARKNRSASDLLPRSRLKQLDTLKETVERQSDAXGAVVG 643
            + R L+  +KS G+   D + +    RLERR+AA++I YD A                           TSFRI G  GE +RI RSLG+SGP+D AI   AWEA K RS+SD++ R +   LD +++    +    G VVG
Sbjct:    1 MDRILARMKKSTGRRGGD-KNITPVRRLERRDAARNINYDAASCSSSSAEDLSVSTSSLMTRSLEFPEPTSFRIGGGVGEMDRIYRSLGVSGPDDLAISFDAWEACKKRSSSDVVNRFKSFDLDKVRDQDLSEEGPSGVVVG 141
The following BLAST results are available for this feature:
BLAST of CX295182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
M3K1_ARATH2.130e-1437.32Mitogen-activated protein kinase kinase kinase 1 O... [more]
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Properties
Property NameValue
Genbank descriptionC05069D11SK PhIFruit1 Citrus clementina cDNA clone C05069D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295182 ID=CX295182; Name=CX295182; organism=Citrus clementina; type=EST; length=697bp
GGCCTCGTGCCGAATTCGGCACGAGGTTCAACCATCACGAGTTTGGGACT
ATATGTTTACGTTTTCGCAGCCGCTGTCGTATTTCTTCTTCTCATTCAGT
TTTCTCGAGAAAGTTATCAAGAAAGATTATACGAGTCGTTTTGGACACCT
GTGAAGGAAGGTTTTTAAGTTTCACCACAGTATGTTGTAAAATTTGGATG
GATTCAGCTCTCAAATGCATCACTTACCTCGATTTTTAAGTCCTAGGGAG
AAATCCGCCGGCAAAGCGGCCATGGACCCGAGGAAGATGAGGCAAAAACC
TCGGCTCGAGCGGCGGAATGCGGCGAAGCACATTGAGTATGATGTGGCCT
CAACATCATCGTCACTTGATGATTCATCGTCTTCATCTTCGCTAATTACT
CGATCGCTTGACTTGTCCGACAGAACGAGCTTCCGCATCGAAGGCGTGGA
GGGAGAGTTCGAGCGGATTTGTCGGAGCTTAGGCTTGTCTGGTCCCGAGG
ATTTCGCGATCCCGGCGGCGGCGTGGGAGGCTCGAAAAAATCGTTCGGCT
TCTGATCTCCTACCGAGGTCGAGGTTGAAACAGCTGGATACTCTGAAAGA
AACGGTGGAGAGACAGAGTGACGCANCGGGTGCGGTGGTCGGTGAGTTGT
GCGATAGGGTTTCGGATATTGTCAGAATTAGGAACGAAACTGAGCTG
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