CX295184

Overview
NameCX295184
Unique NameCX295184
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length545
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14677 contig Ccv1_Contig14677:723..1267. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.111e-33
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  214 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFK 284
[Close]
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.111e-33
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  214 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFK 284
[Close]
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.601e-33
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  213 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFK 283
[Close]
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.048e-32
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  W+DHWIFWVGPFVGA LAA+YHQV+IRAIPFK
Sbjct:  216 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFK 286
[Close]
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.368e-32
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 1 
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHW+FWVGPF+GA LAALYH VVIRAIPFK
Sbjct:  213 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFK 283
[Close]
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.368e-32
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 1 
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHW+FWVGPF+GA LAALYH VVIRAIPFK
Sbjct:  213 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFK 283
[Close]
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.049e-32
Identity = 61/71 (85.92%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVFLVHLATIPITGTGINPARSLGAAIIYN+D  W+DHWIFWVGPF+GA LAA+YHQV+IRAIPFK
Sbjct:  216 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFK 286
[Close]
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.982e-32
Identity = 61/71 (85.92%), Postives = 66/71 (92.96%), Query Frame = 1 
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVFLVHLATIPITGTGINPARSLGAAIIYN+D  W DHWIFWVGPF+GA LAA+YHQV+IRAIPFK
Sbjct:  219 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFK 289
[Close]
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 3.982e-32
Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = 1 
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVFLVHLATIPITGTGINPARSLGAAIIYN+   WDDHWIFWVGPF+GA LAA+YHQVVIRAIPFK
Sbjct:  215 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFK 285
[Close]
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.200e-32
Identity = 61/71 (85.92%), Postives = 66/71 (92.96%), Query Frame = 1 
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVFLVHLATIPITGTGINPARSLGAAII+NKD  WDDHW+FWVGPF+GA LAALYH +VIRAIPFK
Sbjct:  213 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFK 283
The following BLAST results are available for this feature:
BLAST of CX295184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
PIP15_ARATH2.111e-3390.14Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP14_ARATH2.111e-3390.14Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH3.601e-3390.14Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP11_ORYSJ1.048e-3288.73Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP11_VICFA1.368e-3288.73Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH1.368e-3288.73Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_MAIZE3.049e-3285.92Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE3.982e-3285.92Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP12_ORYSJ3.982e-3287.32Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP12_ARATH5.200e-3285.92Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionC05069E01SK PhIFruit1 Citrus clementina cDNA clone C05069E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295184 ID=CX295184; Name=CX295184; organism=Citrus clementina; type=EST; length=545bp
GAGGTGCCAACTGGGTTCGCTGTGTTTTTGGTTCACTTGGCTACCATCCC
AATTACCGGAACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCA
TCTACAACAAGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGA
CCATTCGTTGGAGCTGGACTTGCAGCTTTGTACCACCAAGTCGTGATCAG
AGCCATTCCCTTCAAATGAAGCTGATCGCTTCATCGACGTTCGTGATTGC
ACCTGCATTTGTTTATGGCTGTTGCTGGTTTGCTTATGTGTATTATAAAA
TATTAATTAGTCCTTTGTTCAAATCTGCTGGTGCTGGACCTGGACCTGCT
TCTGTGTTTTCCTTCCTTAAAACGTTTTTTTTTTTTTTTTTTTGAAGAGA
GGTCGATGATGATGACGGATGGGCCCATGGCTAAGTAGGTGGGCGCTGTC
ACTTTGTACATTTGTATGGCTGTGGATTTGTGCAATGTCATCTTGGTAAT
AATATGGACAAAACTAGTTCTATTACTTTTATTAAAAAAAAAAAA
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