CX295191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295191 vs. ExPASy Swiss-Prot
Match: ESF2_SCHPO (Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe GN=esf2 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.869e-22 Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = -3 Query: 353 RKRDGGFQDQGFSEGWVEFTKKGVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTAEIAYKNAVREQRLALELSAAKRERDFYLSKVEKSRALSSIEER 676 R R+GG + + EGW+EF K VAK VA +LN QIGGKK S ++ D+WN+KYL KFKW LT +IA +NA RE RL +E+ +++ Y+ VE ++ + I ++ Sbjct: 164 RLRNGGNKRVMYEEGWIEFESKRVAKSVAELLNTNQIGGKKSSWYHDDIWNMKYLPKFKWHHLTEQIAAENAARESRLKVEIEQGRKQLKQYMRNVENAKMIEGIRKK 271
BLAST of CX295191 vs. ExPASy Swiss-Prot
Match: ESF2_CANAL (Pre-rRNA-processing protein ESF2 OS=Candida albicans GN=ESF2 PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22 Identity = 50/110 (45.45%), Postives = 76/110 (69.09%), Query Frame = -3 Query: 347 RKRDGGFQDQGFSEGWVEFTKKGVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTAEIAYKNAVREQRLALELSAAKRERDFYLSKVEKSRALSSIEERLK 676 R + GG + + F+EGW+EF K AK A LNG ++GGKK S +Y D+ NIKYL FKW DLT +IA +N VR+ +LA+E+S ++ ++S VEKS+ +++I+++ K Sbjct: 166 RVKYGGNKKKNFTEGWIEFVNKSDAKLCAATLNGNKLGGKKTSYYYDDIINIKYLPGFKWLDLTQQIAKENEVRQAKLAMEISQQQKLNKSFVSNVEKSKMIANIQKKRK 275
BLAST of CX295191 vs. ExPASy Swiss-Prot
Match: ABT1_MOUSE (Activator of basal transcription 1 OS=Mus musculus GN=Abt1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21 Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = -3 Query: 377 RDGGFQDQGFSEGWVEFTKKGVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTAEIAYKNAVREQRLALELSAAKRERDFYLSKVEKSR 670 + G + ++EGWVEF K VAKRVA L+ +G +KRS F YDLWN+KYL +F W L+ +A++ VR QRL E++ AKRE DFYL VE+ + Sbjct: 99 KKGAKYSKDYTEGWVEFRDKRVAKRVAASLHNTPMGARKRSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLRNVEQGQ 196
BLAST of CX295191 vs. ExPASy Swiss-Prot
Match: ABT1_RAT (Activator of basal transcription 1 OS=Rattus norvegicus GN=Abt1 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.859e-21 Identity = 47/98 (47.96%), Postives = 65/98 (66.33%), Query Frame = -3 Query: 377 RDGGFQDQGFSEGWVEFTKKGVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTAEIAYKNAVREQRLALELSAAKRERDFYLSKVEKSR 670 + G + ++EGWVEF K +AKRVA L+ +G +KRS F YDLWN+KYL +F W L+ +A++ VR QRL E++ AKRE DFYL VE+ + Sbjct: 98 KKGAKYSKDYTEGWVEFRDKRIAKRVAASLHNTPMGARKRSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLRNVEQGQ 195
BLAST of CX295191 vs. ExPASy Swiss-Prot
Match: ESF2_PICST (Pre-rRNA-processing protein ESF2 OS=Pichia stipitis GN=ESF2 PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21 Identity = 50/111 (45.05%), Postives = 77/111 (69.37%), Query Frame = -3 Query: 344 RKRDGGFQDQGFSEGWVEFTKKGVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTAEIAYKNAVREQRLALELSAAKRERDFYLSKVEKSRALSSIEERLKK 676 R + GG + + F+EGWVEF K AK A+ LN ++GG+K S +Y D+ N+KYLS FKW DLT +IA +N VR+ +L+LELS ++ +++ VEKS+ +S+I+ + K+ Sbjct: 188 RVKYGGNKKKNFTEGWVEFVNKKDAKMCASTLNANKLGGRKTSYYYDDVINMKYLSGFKWFDLTQQIAKENEVRQAKLSLELSQQQKLNKTFVNNVEKSKLVSTIQRKRKE 298
BLAST of CX295191 vs. ExPASy Swiss-Prot
Match: ESF2_GIBZE (Pre-rRNA-processing protein ESF2 OS=Gibberella zeae GN=ESF2 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.142e-21 Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = -3 Query: 347 RKRDGGFQDQGFSEGWVEFTKKGVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTAEIAYKNAVREQRLALELSAAKRERDFYLSKVEKSRALSSIEERLK 676 R R GG + + ++EGWVEFTKK AK V ++LN IGGKK S ++ DLWN+ YL FKW +LT +IA +NA R R+ E+S + +E ++ VEK++ L + + K Sbjct: 160 RVRAGGNKKRSYTEGWVEFTKKKDAKAVCDLLNARTIGGKKGSYYHDDLWNLLYLKGFKWHNLTEQIAAENAERSSRMRAEISKSTKENKEFVRNVEKAKMLDGMAVKAK 269
BLAST of CX295191 vs. ExPASy Swiss-Prot
Match: ESF2_YARLI (Pre-rRNA-processing protein ESF2 OS=Yarrowia lipolytica GN=ESF2 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.410e-21 Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = -3 Query: 353 RKRDGGFQDQGFSEGWVEFTKKGVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTAEIAYKNAVREQRLALELSAAKRERDFYLSKVEKSRALSSIEER 676 R R GG + ++EGW EFTKK AK A+ LNG IGGKK S Y D+ N KYL KFKW DL+ ++A + R+ RL E+S A RE Y+ +EKS+A +R Sbjct: 168 RIRHGGNRALAYTEGWAEFTKKRYAKTCASTLNGNTIGGKKGSQHYDDIMNAKYLPKFKWSDLSEQLAQETHNRQARLRTEISQATRENQTYIQSLEKSKAAERRRQR 275
BLAST of CX295191 vs. ExPASy Swiss-Prot
Match: ESF2_DEBHA (Pre-rRNA-processing protein ESF2 OS=Debaryomyces hansenii GN=ESF2 PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.410e-21 Identity = 49/117 (41.88%), Postives = 78/117 (66.67%), Query Frame = -3 Query: 326 RKRDGGFQDQGFSEGWVEFTKKGVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTAEIAYKNAVREQRLALELSAAKRERDFYLSKVEKSRALSSIEERLKKVCADFG 676 R + GG + + ++ GWVEF K AK A LNG ++GGKK S +Y D+ NIKYLS FKW DLT +IA +N +R+ +L++ELS ++ +++ VEKS+ +++++ + K A+ G Sbjct: 138 RVKYGGNKKKNYTAGWVEFINKKDAKLCAGTLNGNKLGGKKSSYYYDDIINIKYLSAFKWFDLTQQIAKENEIRQAKLSMELSQQQKLNKSFINNVEKSKMINNMQNKRKARQAESG 254
BLAST of CX295191 vs. ExPASy Swiss-Prot
Match: ABT1_PONAB (Activator of basal transcription 1 OS=Pongo abelii GN=ABT1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.410e-21 Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = -3 Query: 377 FSEGWVEFTKKGVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTAEIAYKNAVREQRLALELSAAKRERDFYLSKVEKSR 643 ++EGWVEF K +AKRVA L+ +G ++RS F YDLWN+KYL +F W L+ +A++ VR QRL E++ AKRE DFYL VE+ + Sbjct: 105 YTEGWVEFRDKRIAKRVAASLHNTPMGARRRSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLQSVERGQ 193
BLAST of CX295191 vs. ExPASy Swiss-Prot
Match: ABT1_HUMAN (Activator of basal transcription 1 OS=Homo sapiens GN=ABT1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.410e-21 Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = -3 Query: 377 FSEGWVEFTKKGVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTAEIAYKNAVREQRLALELSAAKRERDFYLSKVEKSR 643 ++EGWVEF K +AKRVA L+ +G ++RS F YDLWN+KYL +F W L+ +A++ VR QRL E++ AKRE DFYL VE+ + Sbjct: 105 YTEGWVEFRDKRIAKRVAASLHNTPMGARRRSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLQSVERGQ 193 The following BLAST results are available for this feature:
BLAST of CX295191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295191 ID=CX295191; Name=CX295191; organism=Citrus clementina; type=EST; length=711bpback to top |