CX295199

Overview
NameCX295199
Unique NameCX295199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295199 vs. ExPASy Swiss-Prot
Match: ZN363_HUMAN (RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens GN=RCHY1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17
Identity = 41/85 (48.24%), Postives = 51/85 (60.00%), Query Frame = -3 
Query:  437 QKLLKEMREHHQYACPICSKSVCDMSKVWEKYDREIAATPMPEAYLNKKVWILCNDCGKTSNVQFHVLAQKCPNCKSYNTRLTRG 691
            +++LKE      Y CP+C  S  DM++ W + D E+A TPMP  Y N  V ILCNDC   S VQFH+L  KC  C+SYNT    G
Sbjct:  174 EEMLKE-----GYRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCKICESYNTAQAGG 253
[Close]
BLAST of CX295199 vs. ExPASy Swiss-Prot
Match: ZN363_MOUSE (RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = -3 
Query:  437 QKLLKEMREHHQYACPICSKSVCDMSKVWEKYDREIAATPMPEAYLNKKVWILCNDCGKTSNVQFHVLAQKCPNCKSYNTRLTRG 691
            +++LKE      Y CP+C  S  DM++ W + D E+A TPMP  Y N  V ILCNDC   S VQFH+L  KC  C SYNT    G
Sbjct:  174 EEMLKE-----GYRCPLCMHSALDMTRYWRQLDTEVAQTPMPSEYQNVTVDILCNDCNGRSTVQFHILGMKCKLCDSYNTAQAGG 253
The following BLAST results are available for this feature:
BLAST of CX295199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ZN363_HUMAN3.540e-1748.24RING finger and CHY zinc finger domain-containing ... [more]
ZN363_MOUSE6.039e-1748.24RING finger and CHY zinc finger domain-containing ... [more]
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Properties
Property NameValue
Genbank descriptionC05069F09SK PhIFruit1 Citrus clementina cDNA clone C05069F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295199 ID=CX295199; Name=CX295199; organism=Citrus clementina; type=EST; length=702bp
GTTTTTTTTTTTTTTTTTCACCAAGTGAAATATAGGAAAACTAAATGAAC
TAAAAAGGAAAAACATTAATTAGTTGCAAAGTGAGTTAGATGTTCATCCC
AGCACCAGTATGAGCTAGTTGCTATGACTATTTACGGCGGTTGCCTTGAG
GAAACATACAACAAAGAACAAATGAAATGAAAAACAAGAAGACAGAAAAC
AACACCATGAGCAGATTCAAACACCACGAGCTAGACTAGAAACACCACGA
GGAAGACTAACTGCTCCCCACAGAGCAAGTTGTAGATGCAGCCACTACCC
CATAATGAGTAACGACTGTGGCTGAAATGGTTGAAAAGATTAATTAAAAG
CCGAACCCATGCACATCAAACAGAGAGTTCCTGTCACCGTCACCGTCACC
GTCACCATCATTGCTAACAATACTGCCACTTGCTCAGCCCCTGGTCAAGC
GAGTGTTGTAGGACTTGCAGTTTGGGCACTTCTGAGCCAGCACATGGAAC
TGGACATTAGAGGTCTTACCACAGTCATTGCAAAGGATCCAAACCTTTTT
ATTTAGGTAAGCTTCTGGCATTGGAGTAGCCGCTATCTCCCTGTCATATT
TCTCCCATACTTTGGACATGTCACAGACTGACTTGGAGCAGATAGGACAG
GCATATTGATGATGTTCCCGCATCTCCTTCAGCAATTTTTGTGTATGGTA
TG
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