CX295277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295277 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.515e-42 Identity = 105/208 (50.48%), Postives = 131/208 (62.98%), Query Frame = 3 Query: 105 ASSLALKRLVSFNLI--PRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSV--RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADV 704 +S+LAL+RL+S + + PRALR V P A S SR FNTNA R Y TRSLSQ+LNFMDQ++E P S TRG G+RRGW+ KE DDAL+L IDMPGL +EDV+++LEQNTLVIR S RR+TSRI+LPEK+Y+TD+IKAEMKNGVLKV +PK+KE+ER ++ Sbjct: 4 SSALALRRLLSSSTVAVPRALRA-VRPVAAS-SRLFNTNAARNYEDGVDRNHHSNRHVSRHGGDFFSHILDPFTP-----TRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDERNNI 204
BLAST of CX295277 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.774e-40 Identity = 102/209 (48.80%), Postives = 125/209 (59.81%), Query Frame = 3 Query: 102 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSV----RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADV 704 MAS+LALKRL+S ++ PR+ R + P+ +S R FNTNAVR Y TRS+SQVLN MDQ E+P S TRG G RRGWD KE DDAL L IDMPGL +EDV+++LEQ+TLVIR RR+TSRI LP+K+Y+ D+IKAEMKNGVLKV +PK+KE+ER DV Sbjct: 1 MASALALKRLLSSSIAPRS-RSVLRPAVSS--RLFNTNAVRSYDDDGENGDGVDLYRRSVPRRRGDFFSDVFDPFSP--TRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQERNDV 204
BLAST of CX295277 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.026e-40 Identity = 102/203 (50.25%), Postives = 124/203 (61.08%), Query Frame = 3 Query: 102 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXX--SVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADV 704 MASSLALKR +S L+ + + P A+SASR FNTNA+RQY RSLSQVLN +D +T++P S RRGWDA+ET+DAL L +DMPGLGKEDV++S+EQNTL I+ S RR++SRIDLPEKLY+ D IKAEMKNGVLKVTVPK+KEEER +V Sbjct: 1 MASSLALKRFLSSGLLSSSF---LRPVASSASRSFNTNAMRQYDQHSDDRNVDVYRHSFPRTRRDDLLLSDVFDPFSPP-RSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEEERNNV 196
BLAST of CX295277 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.512e-38 Identity = 64/94 (68.09%), Postives = 77/94 (81.91%), Query Frame = 3 Query: 423 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADV 704 RGWDA+ET+DAL+L +DMPGL KEDV++S+EQNTL+I+ S RRYTSRIDLP+KLY+ DQI+AEMKNGVLKV VPK+KEEER DV Sbjct: 112 RGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEEESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEEERKDV 205 HSP 2 Score: 39.6614 bits (91), Expect = 2.512e-38 Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 3 Query: 102 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQY 230 MASSL KR +S +L+ R+L + P+A+++ R F+TNA+RQY Sbjct: 1 MASSLIAKRFLSSSLLSRSL---LRPAASASHRSFDTNAMRQY 40 HSP 3 Score: 25.7942 bits (55), Expect = 2.512e-38 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 317 CV*SIFTNKEPEPGPELHGSDDGE 388 CV SIF++ E EPG E G G+ Sbjct: 72 CVGSIFSDSEFEPGSEHDGPGHGQ 95
BLAST of CX295277 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.713e-36 Identity = 87/203 (42.86%), Postives = 114/203 (56.16%), Query Frame = 3 Query: 108 SSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRGG---LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVF 707 +S+AL+RL S NL+ + + S SR FNTNA TRS+ Q++N MDQ+ E+PF + +RG +RRGWD +E ++AL L +DMPGL KEDV+VS+E NTL+I+ RRY+SRI+L LY+ D IKAEMKNGVLKVTVPK+KEEE+ DVF Sbjct: 2 ASMALRRLASRNLVSGGIFRPL-----SVSRSFNTNAQMGRVDHDHELDDRSNRAPISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVF 199
BLAST of CX295277 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.837e-27 Identity = 84/216 (38.89%), Postives = 114/216 (52.78%), Query Frame = 3 Query: 102 MASSLALKRLVSFNLIPRALRCTVAPSATSA---------SRFFNTNA-VRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--RSLSQVLNFMDQMTESPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVF 707 MAS +A KR+ F L+ + L + A A SA SR +NT A +R++ + +SL ++L+ MD + +P LRRGW+AKE+++AL+L +DMPGLGKE V+V EQN+LVI+ RY+ RI+L ++YR DQIKAEMKNGVLKV VPKVKEE+R DVF Sbjct: 1 MASIVASKRIPLFRLVEQLLAASPAQGAASALRPVAVAGGSRAYNTGAQLRRHERDESDDDSGRGYDTRRPTRDATMPAFFSDVFRDPFSAPQSLGRLLSLMDDLA-TPAGRAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVPKVKEEQRRDVF 215
BLAST of CX295277 vs. ExPASy Swiss-Prot
Match: HS26M_ORYSJ (26.2 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP26.2 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 64/130 (49.23%), Postives = 79/130 (60.77%), Query Frame = 3 Query: 345 SLSQVLNFM-DQMTESPFFSGTRG----GLRRG--WDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVF 707 SL ++L M D + GT G RRG W AKE DDA++L + MPGLGKE V+V EQN+LVI+ RYT RI+LP ++ D+IKAEMKNGVL+V VPK+KEEER DVF Sbjct: 114 SLGRLLALMEDAAVATAAAPGTNGLATAAARRGGWWVAKEDDDAVHLKVSMPGLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRVAVPKLKEEERKDVF 243
BLAST of CX295277 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17 Identity = 52/129 (40.31%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 342 RSLSQVLNFMDQMTES--PFFSGTRGG-----LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEER 695 R++ Q+L+ MD+M E P RGG +R WD KE + + + DMPGL KEDV++S+E N LVI + SV Y +R+ LP+ + D+IKAE+KNGVL +T+PK K E + Sbjct: 93 RTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEK-DKIKAELKNGVLFITIPKTKVERK 220
BLAST of CX295277 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15 Identity = 50/129 (38.76%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 342 RSLSQVLNFMDQMTESPF-FSGTR---GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTS---RIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEER 695 RS+ Q+L+ MD++ E F G G +R WD K+ + + + DMPGL KEDV+VS+E + LVI + S R Y+S R+ LP+ + D++KAE+KNGVL +T+PK K E + Sbjct: 47 RSMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEK-DKVKAELKNGVLYITIPKTKVERK 174
BLAST of CX295277 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 44/128 (34.38%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 342 RSLSQVLNFMDQMTESPF-FSGTR----GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI-----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEER 695 R++ Q+++ MD++ E F G+R G +R WD K+ ++ + + DMPGL KE+V+VS+E + LVI + + Y +R+ LP+ + + D++KAE+KNGVL +++PK K E++ Sbjct: 108 RTMRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDK-DKVKAELKNGVLLISIPKTKVEKK 234 The following BLAST results are available for this feature:
BLAST of CX295277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295277 ID=CX295277; Name=CX295277; organism=Citrus clementina; type=EST; length=708bpback to top |