CX295278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295278 vs. ExPASy Swiss-Prot
Match: EIF3B_TOBAC (Eukaryotic translation initiation factor 3 subunit B OS=Nicotiana tabacum GN=TIF3B1 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.202e-62 Identity = 111/126 (88.10%), Postives = 119/126 (94.44%), Query Frame = 2 Query: 2 WDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRTLKDHFFQFLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQDVSMQLSEQEREKRRSLKNEWEKKISEWKRLHEEEKMERQMLRDGEASD 379 WDPTGRYVAT+VTSVHEMENGFNIWSFNGKLLYR LKDHFFQ+LWRPRPPSFL+ EKEEEIAKNLK+YSKKYEAEDQDVS+QLSEQ+REKR+ LK EWE I+EWKRLHEEEKMERQ LRDGEASD Sbjct: 564 WDPTGRYVATSVTSVHEMENGFNIWSFNGKLLYRILKDHFFQYLWRPRPPSFLSKEKEEEIAKNLKRYSKKYEAEDQDVSLQLSEQDREKRKKLKEEWEAWINEWKRLHEEEKMERQKLRDGEASD 689
BLAST of CX295278 vs. ExPASy Swiss-Prot
Match: EIF3B_ARATH (Eukaryotic translation initiation factor 3 subunit B OS=Arabidopsis thaliana GN=TIF3B1 PE=1 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 3.389e-57 Identity = 103/126 (81.75%), Postives = 111/126 (88.10%), Query Frame = 2 Query: 2 WDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRTLKDHFFQFLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQDVSMQLSEQEREKRRSLKNEWEKKISEWKRLHEEEKMERQMLRDGEASD 379 WDPTGRYVATAVTSVHEMENGF IWSFNG +LYR LKDHFFQ WRPRPPSFLT EKEEEIAK LKKYSKKYEAEDQDVS+ LSEQ+REKR++LK EWEK + +WK LHEEEK+ RQ LRDGE SD Sbjct: 560 WDPTGRYVATAVTSVHEMENGFTIWSFNGIMLYRILKDHFFQLAWRPRPPSFLTAEKEEEIAKTLKKYSKKYEAEDQDVSLLLSEQDREKRKALKEEWEKWVMQWKSLHEEEKLVRQNLRDGEVSD 685
BLAST of CX295278 vs. ExPASy Swiss-Prot
Match: EIF3B_AEDAE (Eukaryotic translation initiation factor 3 subunit B OS=Aedes aegypti GN=eIF3-S9 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.620e-25 Identity = 56/130 (43.08%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 2 WDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRTLKDHFFQFLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQDVSMQLSEQEREKRRSLKNEW----EKKISEWKRLHEEEKMERQMLRDGEASD 379 WDPTGRYV T + + ++G++IWSF GK+L R +F FLWRPRPP+ L+ EK++EI KNLKKY ++E++D+ + S++ EKR L+ ++ K++SEW EE+K R LR+ +D Sbjct: 537 WDPTGRYVVTGTSGKVKEDHGYHIWSFQGKILKRVNLKNFILFLWRPRPPTLLSDEKQKEIRKNLKKYYAQFESKDRIRMTRASKELLEKRAKLREQFVEYRTKRVSEW----EEQKYRRMQLRNNIDTD 662
BLAST of CX295278 vs. ExPASy Swiss-Prot
Match: EIF3B_HUMAN (Eukaryotic translation initiation factor 3 subunit B OS=Homo sapiens GN=EIF3B PE=1 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 8.425e-24 Identity = 54/127 (42.52%), Postives = 85/127 (66.93%), Query Frame = 2 Query: 2 WDPTGRYVATAVTS-VHEMENGFNIWSFNGKLLYRTLKDHFFQFLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQDVSMQLSEQEREKRRSLKNEWEKKISEWKRLHEEEKMERQMLRDGEASD 379 WDPTGRYV T+V+ H+++N + +W+F G+LL + KD F Q LWRPRPP+ L+ E+ ++I K+LKKYSK +E +D+ + S++ E+RR++ ++ K + L+ E+K ER LR G +D Sbjct: 659 WDPTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRGGVDTD 785
BLAST of CX295278 vs. ExPASy Swiss-Prot
Match: EIF3B_DROGR (Eukaryotic translation initiation factor 3 subunit B OS=Drosophila grimshawi GN=eIF3-S9 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.100e-23 Identity = 57/125 (45.60%), Postives = 83/125 (66.40%), Query Frame = 2 Query: 2 WDPTGRYVATAVTSVHEMEN-GFNIWSFNGKLLYRTLKDHFFQFLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQDVSMQLSEQEREKRRSLKNEW----EKKISEWKRLHEEEKMERQMLR 361 WDPTGRYV T V+S E+ GFN+++ G+++ RT+ +F QFLWRPRPP+ L+ EK++EI KNLKKY +E +D+ + S++ EKR L+ + K+I+EWK ++K RQMLR Sbjct: 540 WDPTGRYVVTGVSSWKVKEDTGFNMYTLQGRIIKRTILKNFVQFLWRPRPPTLLSEEKQKEIKKNLKKYYPTFEQKDRLRLTRASKELLEKRAQLRETFMEYRNKRIAEWK----DQKSRRQMLR 660
BLAST of CX295278 vs. ExPASy Swiss-Prot
Match: EIF3B_DROVI (Eukaryotic translation initiation factor 3 subunit B OS=Drosophila virilis GN=eIF3-S9 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.877e-23 Identity = 57/125 (45.60%), Postives = 83/125 (66.40%), Query Frame = 2 Query: 2 WDPTGRYVATAVTSVHEMEN-GFNIWSFNGKLLYRTLKDHFFQFLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQDVSMQLSEQEREKRRSLKNEW----EKKISEWKRLHEEEKMERQMLR 361 WDPTGRYV T V+S E+ GFN+++F G+++ RT+ +F QFLWRPRPP+ L+ EK++EI KNLKKY +E +D+ + S++ EKR L+ + K+I+EWK ++K R MLR Sbjct: 540 WDPTGRYVVTGVSSWKVKEDTGFNMYTFQGRIIRRTILKNFVQFLWRPRPPTLLSEEKQKEIKKNLKKYYPVFEQKDRLRLTRASKELLEKRSQLRETFMEYRNKRIAEWK----DQKSRRVMLR 660
BLAST of CX295278 vs. ExPASy Swiss-Prot
Match: EIF3B_DROAN (Eukaryotic translation initiation factor 3 subunit B OS=Drosophila ananassae GN=eIF3-S9 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.451e-23 Identity = 57/125 (45.60%), Postives = 82/125 (65.60%), Query Frame = 2 Query: 2 WDPTGRYVATAVTSVHEMEN-GFNIWSFNGKLLYRTLKDHFFQFLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQDVSMQLSEQEREKRRSLKNEW----EKKISEWKRLHEEEKMERQMLR 361 WDPTGRYV T V+S E+ GFN+++F G+++ RT+ +F QFLWRPRPP+ L EK++EI KNLKKY +E +D+ + S++ EKR L+ + K+I+EWK ++K R MLR Sbjct: 536 WDPTGRYVVTGVSSWKVKEDTGFNMYTFQGRIIKRTILKNFVQFLWRPRPPTLLAEEKQKEIKKNLKKYYAVFEQKDRLRLTRASKELLEKRAQLRETFMEYRNKRIAEWK----DQKSRRVMLR 656
BLAST of CX295278 vs. ExPASy Swiss-Prot
Match: EIF3B_BOMMO (Eukaryotic translation initiation factor 3 subunit B OS=Bombyx mori GN=eIF3-S9 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.451e-23 Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 2 Query: 2 WDPTGRYVATAVTSVH-EMENGFNIWSFNGKLLYRTLKDHFFQFLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQ----DVSMQLSEQEREKRRSLKNEWEKKISEWKRLHEEEKMERQMLRD 364 WDPTGRYV T V+S+ +M+ G+ IWSF GK+L R +K+ F QF WRPRPP+ L+ ++++EI KNLKKY ++E++D+ S +L + E+ + E KI EW E+K R LRD Sbjct: 543 WDPTGRYVVTGVSSLKCKMDCGYYIWSFQGKILRRVMKEGFAQFHWRPRPPTLLSEKQQKEIKKNLKKYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEYRESKIQEW----NEQKPRRLELRD 664
BLAST of CX295278 vs. ExPASy Swiss-Prot
Match: EIF3B_DROWI (Eukaryotic translation initiation factor 3 subunit B OS=Drosophila willistoni GN=eIF3-S9 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.201e-23 Identity = 56/125 (44.80%), Postives = 83/125 (66.40%), Query Frame = 2 Query: 2 WDPTGRYVATAVTSVHEMEN-GFNIWSFNGKLLYRTLKDHFFQFLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQDVSMQLSEQEREKRRSLKNEW----EKKISEWKRLHEEEKMERQMLR 361 WDPTGRYV T V+S E+ GFN+++F G+++ RT+ +F QFLWRPRPP+ L+ EK+++I KNLKKY +E +D+ + S++ EKR L+ + K+I+EWK ++K R MLR Sbjct: 540 WDPTGRYVVTGVSSWKVKEDTGFNMYTFQGRIIKRTILKNFVQFLWRPRPPTLLSEEKQKDIKKNLKKYYPAFEQKDRLRLTRASKELLEKRSQLRETFMEYRNKRIAEWK----DQKSRRVMLR 660
BLAST of CX295278 vs. ExPASy Swiss-Prot
Match: EIF3B_DROMO (Eukaryotic translation initiation factor 3 subunit B OS=Drosophila mojavensis GN=eIF3-S9 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.201e-23 Identity = 57/125 (45.60%), Postives = 83/125 (66.40%), Query Frame = 2 Query: 2 WDPTGRYVATAVTSVHEMEN-GFNIWSFNGKLLYRTLKDHFFQFLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQDVSMQLSEQEREKRRSLKNEW----EKKISEWKRLHEEEKMERQMLR 361 WDPTGRYV T V+S E+ GFN+++F G+++ RT+ +F QFLWRPRPP+ L+ EK++EI KNLKKY +E +D+ + S++ EKR L+ + K+I+EWK ++K R MLR Sbjct: 540 WDPTGRYVVTGVSSWKVKEDTGFNMYTFQGRIIRRTILKNFVQFLWRPRPPTLLSEEKQKEIKKNLKKYYPIFEQKDRLRLTRASKELLEKRAQLRETFMEYRNKRIAEWK----DQKSRRIMLR 660 The following BLAST results are available for this feature:
BLAST of CX295278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295278 ID=CX295278; Name=CX295278; organism=Citrus clementina; type=EST; length=530bpback to top |