CX295300

Overview
NameCX295300
Unique NameCX295300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6497 contig Ccv1_Contig6497:402..1134. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295300 vs. ExPASy Swiss-Prot
Match: OSBP2_MOUSE (Oxysterol-binding protein 2 OS=Mus musculus GN=Osbp2 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.636e-36
Identity = 97/259 (37.45%), Postives = 138/259 (53.28%), Query Frame = 2
Query:   38 PVGVLTLEFD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYS-CKLKFKEQSIIDRNP-HQVHGIVQDRNGKTVATLFGKWDESIHYVIGECS----------GKGKELESLSEACLLWKRSKPPKYATR-YNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARK---------------MQENGWKPRWFAK--DRATG--TYRYIGGYWEARETGDWNLCPDIF 715
            P+G + LEF   G  + W K TS+++N+I+GKL+ D  G + I  ++    C+LKF   S   +    +V G+V D  GK    L G WD+ +     ECS          G+ K +     A LLW++   P+ A   Y F+  A+TLNE   G+     PTDSRLRPDQR +E G ++ AN+EK RLE++QR +R+                + +G+ P WF K  D  TG     Y GGYWEA+E  DW++CP+IF
Sbjct:  659 PLGAIHLEFQASGNHYVWRKSTSTVHNIIVGKLWIDQSGDIEIVNHKTKDRCQLKFVPYSYFSKEAARKVTGVVSDSQGKAHYVLSGSWDDQM-----ECSKIVHSSPSSDGRQKTVYQTLPAKLLWRKYPLPENAENMYYFSELALTLNEQEDGVA----PTDSRLRPDQRLMERGRWDEANTEKQRLEEKQRLSRRRRLESCTAGCGGEEEKESDGYVPLWFEKRLDPLTGEMACMYKGGYWEAKEKKDWHMCPNIF 908          
BLAST of CX295300 vs. ExPASy Swiss-Prot
Match: OSBP2_HUMAN (Oxysterol-binding protein 2 OS=Homo sapiens GN=OSBP2 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.791e-36
Identity = 99/264 (37.50%), Postives = 137/264 (51.89%), Query Frame = 2
Query:   38 PVGVLTLEFD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYS-CKLKFKEQSIIDRNP-HQVHGIVQDRNGKTVATLFGKWDESIHYVIGECS-------------GKGKELESLSEACLLWKRSKPPKYATR-YNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARK-----------------MQENGWKPRWFAK--DRATGTYR--YIGGYWEARETGDWNLCPDIF 715
            P+G + LEF   G  + W K TS+++N+I+GKL+ D  G + I  ++    C+LKF   S   +    +V G+V D  GK    L G WDE +     ECS             GK K +     A LLWK+   P+ A   Y F+  A+TLNE   G+     PTDSRLRPDQR +E G ++ AN+EK RLE++QR +R+                  + + + P WF K  D  TG     Y GGYWEA+E  DW++CP+IF
Sbjct:  662 PLGAIHLEFQASGNHYVWRKSTSTVHNIIVGKLWIDQSGDIEIVNHKTNDRCQLKFLPYSYFSKEAARKVTGVVSDSQGKAHYVLSGSWDEQM-----ECSKVMHSSPSSPSSDGKQKTVYQTLSAKLLWKKYPLPENAENMYYFSELALTLNEHEEGVA----PTDSRLRPDQRLMEKGRWDEANTEKQRLEEKQRLSRRRRLEACGPGSSCSSEEEKEADAYTPLWFEKRLDPLTGEMACVYKGGYWEAKEKQDWHMCPNIF 916          
BLAST of CX295300 vs. ExPASy Swiss-Prot
Match: OSBL2_HUMAN (Oxysterol-binding protein-related protein 2 OS=Homo sapiens GN=OSBPL2 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.791e-36
Identity = 92/270 (34.07%), Postives = 146/270 (54.07%), Query Frame = 2
Query:   38 PVGVLTLEF-DDGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNRE-YSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYV----------------------IGECSGKG------------KELESLSEACLLWK-RSKPPKYATRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARK---MQENGWKPRWF--AKDRATGT--YRYIGGYWEARETGDWNLCPDIF 715
            P G +TLE     E + W+  T  ++N+I+GKL+ + YGT+ I  +R  + C L FK   +  +  H+V G +QD+N K +  ++GKW E +  +                      + E SGK             + ++ +  + LLW+  ++PP  A  YNFT F ++LNE+  G+++ LPPTD RLRPD R +ENG  ++A+ EK RLE++QR+AR+    +E  W+ RWF    +  TGT  + Y G Y+E     +++ CPDI+
Sbjct:  215 PRGTITLELLKHNEAYTWTNPTCCVHNVIIGKLWIEQYGTVEILNHRTGHKCVLHFKPCGLFGKELHKVEGHIQDKNKKKLFMIYGKWTECLWGIDPVSYESFKKQERRGDHLRKAKLDEDSGKADSDVADDVPVAQETVQVIPGSKLLWRINTRPPNSAQMYNFTSFTVSLNELETGMEKTLPPTDCRLRPDIRGMENGNMDLASQEKERLEEKQREARRERAKEEAEWQTRWFYPGNNPYTGTPDWLYAGDYFER----NFSDCPDIY 480          
BLAST of CX295300 vs. ExPASy Swiss-Prot
Match: OSBP1_HUMAN (Oxysterol-binding protein 1 OS=Homo sapiens GN=OSBP PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.809e-35
Identity = 99/254 (38.98%), Postives = 136/254 (53.54%), Query Frame = 2
Query:   38 PVGVLTLEFD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYS-CKLKFKEQSIIDRN-PHQVHGIVQDRNGKTVATLFGKWDES-----IHYVIGECSGKGKEL--ESLSEACLLWKRSKPPKYATR-YNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQE-------------NGWKPRWF--AKDRATG--TYRYIGGYWEARETGDWNLCPDIF 715
            P+G +   F   G  + W KVT++++N+I+GKL+ D  G + I  ++    C LKF   S   R+   +V G V D +GK    L G WDE      +  VIGE  G  ++   E+     +LWKR+  PK A   Y F+  A+TLN    G      PTDSRLRPDQR +ENG ++ AN+EK RLE++QR +RK +E             + +K  WF   KD  T   T+ Y G YWE +E  DW+ CPDIF
Sbjct:  558 PLGTIHCIFHATGHHYTWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTDPSGKVHFALLGTWDEKMECFKVQPVIGENGGDARQRGHEAEESRVMLWKRNPLPKNAENMYYFSELALTLNAWESGTA----PTDSRLRPDQRLMENGRWDEANAEKQRLEEKQRLSRKKREAEAMKATEDGTPYDPYKALWFERKKDPVTKELTHIYRGEYWECKEKQDWSSCPDIF 807          
BLAST of CX295300 vs. ExPASy Swiss-Prot
Match: OSBP1_RABIT (Oxysterol-binding protein 1 OS=Oryctolagus cuniculus GN=OSBP PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.086e-35
Identity = 99/254 (38.98%), Postives = 135/254 (53.15%), Query Frame = 2
Query:   38 PVGVLTLEFD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYS-CKLKFKEQSIIDRN-PHQVHGIVQDRNGKTVATLFGKWDES-----IHYVIGECSGKGKEL--ESLSEACLLWKRSKPPKYATR-YNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQE-------------NGWKPRWF--AKDRATG--TYRYIGGYWEARETGDWNLCPDIF 715
            P+G +   F   G  + W KVT++++N+I+GKL+ D  G + I  ++    C LKF   S   R+   +V G V D +GK    L G WDE      +  V GE  G  ++   E+     +LWKR+  PK A   Y F+  A+TLN    G      PTDSRLRPDQR +ENG ++ AN+EK RLE++QR +RK +E             + +K  WF   KD  T   T+ Y G YWE +E  DWN CPDIF
Sbjct:  560 PLGTIHCIFHATGHHYTWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTDPSGKVHFALLGTWDEKMDCFKVQPVSGENGGDARQRGHEAEESRVMLWKRNPLPKNAENMYYFSELALTLNAWEGGTA----PTDSRLRPDQRLMENGRWDEANAEKQRLEEKQRLSRKKREAEAMKATEDGTPYDPYKALWFERKKDPVTKELTHIYRGEYWECKEKQDWNSCPDIF 809          
BLAST of CX295300 vs. ExPASy Swiss-Prot
Match: YB35_SCHPO (Oxysterol-binding protein homolog C2F12.05c OS=Schizosaccharomyces pombe GN=SPBC2F12.05c PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.532e-34
Identity = 92/229 (40.17%), Postives = 128/229 (55.90%), Query Frame = 2
Query:   38 PVGVLTLEF----DDGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNRE-YSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYVIGECSGKGKELESLSEACLLWKR-SKPPKYATRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQENG----WKPRWF--AKDRATGT--YRYIGGYWEARE 682
            P+G   LE      + E++ W KVTSS+  +ILG    D+YG M I  +    +C L FK +     N H+V G VQ  +      + G W++ I    G+     K         LLW+   +PP+    +N T FAI+LN +TP LK  LPPTD+RLRPDQR +ENG+Y++A SEK RLE++QR+ R+M+E G    W PRWF  AK   TG   +++   YW+ RE
Sbjct: 1075 PLGTWFLELRHPSGEVELYTWKKVTSSVVGIILGSPSVDNYGQMHIVNHSSGINCVLDFKPRGWRGTNAHEVKGSVQSTDDTPKWMVNGHWNDKI---FGQQPNGNK--------ILLWQNHERPPR---PFNLTPFAISLNALTPQLKPWLPPTDTRLRPDQRAMENGQYDLAASEKNRLEEKQRKKRRMREQGEMPPWSPRWFSAAKHPVTGEDYWQFNNEYWKIRE 1289          
BLAST of CX295300 vs. ExPASy Swiss-Prot
Match: OSBP1_MOUSE (Oxysterol-binding protein 1 OS=Mus musculus GN=Osbp PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 97/254 (38.19%), Postives = 133/254 (52.36%), Query Frame = 2
Query:   38 PVGVLTLEFDD-GEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYS-CKLKFKEQSIIDRN-PHQVHGIVQDRNGKTVATLFGKWDES-----IHYVIGECSGKGKEL--ESLSEACLLWKRSKPPKYATR-YNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQE-------------NGWKPRWF--AKDRATG--TYRYIGGYWEARETGDWNLCPDIF 715
            P+G +   F   G  + W KVT++++N+I+GKL+ D  G + I  ++    C LKF   S   R+   +V G V D +GK    L G WDE      +    GE  G  ++   E+     +LWKR+  PK A   Y F+  A+TLN    G      PTDSRLRPDQR +ENG ++ AN+EK RLE++QR +RK +E             + +K  WF   KD  T   T+ Y G YWE +E  DW  CPDIF
Sbjct:  502 PLGTIHCIFHSTGHHYTWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTDPSGKVHFALLGTWDEKMDCFKVQAASGENGGDARQRGHEAEDSRVMLWKRNPLPKNAENMYYFSELALTLNAWEGGTA----PTDSRLRPDQRLMENGRWDEANAEKQRLEEKQRLSRKKREAEAAKATEDGTPHDPYKALWFERKKDPVTRELTHIYSGEYWECKEKQDWGSCPDIF 751          
BLAST of CX295300 vs. ExPASy Swiss-Prot
Match: OSBL3_HUMAN (Oxysterol-binding protein-related protein 3 OS=Homo sapiens GN=OSBPL3 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.412e-34
Identity = 85/204 (41.67%), Postives = 119/204 (58.33%), Query Frame = 2
Query:   71 GEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYSC--KLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYVIGECSGKGKELESLSEACLLWKRSKPPK-YATRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQENG---WKPRWFAKDR-----ATGTY 649
            G+ F+W+KVTS I+N++ G+ + +HYG + I+   + SC  K+ F +      N H++ G V DR+GK V  LFGKW ESI+     C G        S AC+ W+ +  PK Y   Y+FT+FA+ LNE+ P  K  LPPTD+R RPDQR LE G  E A  +K R+EQ QR+ R++ E      +PR+F K       + GTY
Sbjct:  678 GDHFEWNKVTSCIHNILSGQRWIEHYGEIVIKNLHDDSCYCKVNFIKAKYWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIY-----CGGGS------SSACV-WRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGNLEEAEIQKQRIEQLQRERRRVLEENHVEHQPRFFRKSDDDSWVSNGTY 869          
BLAST of CX295300 vs. ExPASy Swiss-Prot
Match: OSBL1_MOUSE (Oxysterol-binding protein-related protein 1 OS=Mus musculus GN=Osbpl1a PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.456e-34
Identity = 92/267 (34.46%), Postives = 134/267 (50.19%), Query Frame = 2
Query:   38 PVGVLTLEF-DDGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYS-CKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYVIG--------------ECSGKGKELESLSEA-----------------CLLWKRS-KPPKYATRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARK---MQENGWKPRWFAKD----RATGTYRYIGGYWEARETGDWNLCPDIF 715
            P G +TLE  D  E + W+  T  ++N+I+GKL+ + YG + I  ++    C L FK   +  +  H+V G +QD++ K +  L+GKW E ++ V                E     K+  S  E+                  LLW+ + +PP  A  YNFT FA+ LNEV   ++  +P TD RLRPD R +ENGE ++A+ EK RLE++QR ARK     E  WK RWF +          + Y G YW+      +NL PDI+
Sbjct:  688 PKGTITLELLDHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQTSSSEESDEMPVPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKEMESVIPKTDCRLRPDIRAMENGEIDLASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYSGAQDWIYSGSYWDRNY---FNL-PDIY 950          
BLAST of CX295300 vs. ExPASy Swiss-Prot
Match: OSBL3_MOUSE (Oxysterol-binding protein-related protein 3 OS=Mus musculus GN=Osbpl3 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.601e-34
Identity = 83/204 (40.69%), Postives = 121/204 (59.31%), Query Frame = 2
Query:   71 GEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYSC--KLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYVIGECSGKGKELESLSEACLLWKRSKPPK-YATRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARK-MQENG--WKPRWFAKDR-----ATGTY 649
            G+ F+W+KVTS I+N++ G+ + +HYG + I+   + SC  K+ F +      N H++ G V DR+GK V  LFGKW ESI+     C G        S +  +W+ +  PK Y   Y FT+FA+ LNE+ P  +  LPPTD+R RPDQR LE G+ E A  +K R+E+ QR+ R+ ++ENG   +PR+F K       + GTY
Sbjct:  646 GDHFEWNKVTSCIHNILSGQRWIEHYGEIDIKNLNDDSCHCKVNFIKAKYWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIY-----CGGA-------SSSTCVWRANPMPKGYEQYYGFTQFALELNEMDPLSRSLLPPTDTRFRPDQRLLEEGDIEEAEVQKQRIEKLQRERRRVLEENGVEHQPRFFRKSSDDAWVSNGTY 837          
The following BLAST results are available for this feature:
BLAST of CX295300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
OSBP2_MOUSE1.636e-3637.45Oxysterol-binding protein 2 OS=Mus musculus GN=Osb... [more]
OSBP2_HUMAN2.791e-3637.50Oxysterol-binding protein 2 OS=Homo sapiens GN=OSB... [more]
OSBL2_HUMAN2.791e-3634.07Oxysterol-binding protein-related protein 2 OS=Hom... [more]
OSBP1_HUMAN1.809e-3538.98Oxysterol-binding protein 1 OS=Homo sapiens GN=OSB... [more]
OSBP1_RABIT3.086e-3538.98Oxysterol-binding protein 1 OS=Oryctolagus cunicul... [more]
YB35_SCHPO1.532e-3440.17Oxysterol-binding protein homolog C2F12.05c OS=Sch... [more]
OSBP1_MOUSE2.000e-3438.19Oxysterol-binding protein 1 OS=Mus musculus GN=Osb... [more]
OSBL3_HUMAN3.412e-3441.67Oxysterol-binding protein-related protein 3 OS=Hom... [more]
OSBL1_MOUSE4.456e-3434.46Oxysterol-binding protein-related protein 1 OS=Mus... [more]
OSBL3_MOUSE7.601e-3440.69Oxysterol-binding protein-related protein 3 OS=Mus... [more]

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Properties
Property NameValue
Genbank descriptionC05070G06SK PhIFruit1 Citrus clementina cDNA clone C05070G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295300 ID=CX295300; Name=CX295300; organism=Citrus clementina; type=EST; length=732bp
ATTCGGCCGAGGCCTCGTGCCGAATTCGGCACGAGGCCCTGTTGGTGTCT
TAACTTTGGAATTTGATGATGGAGAAGTTTTCCAATGGAGTAAGGTTACC
TCATCAATCTATAATCTCATATTGGGAAAGTTGTACTGTGATCACTATGG
TACAATGCGTATAGAGGGAAATCGTGAGTACTCGTGTAAGCTGAAATTCA
AAGAGCAGTCTATCATTGACAGAAATCCACATCAGGTACATGGCATAGTT
CAAGACAGGAATGGAAAAACAGTGGCAACCCTATTTGGAAAATGGGATGA
GAGCATCCATTACGTGATTGGAGAATGTTCTGGAAAGGGAAAAGAACTTG
AGTCTTTATCAGAAGCTTGCCTGCTCTGGAAGCGGAGCAAGCCTCCCAAA
TATGCCACCAGATATAACTTCACTCGTTTTGCCATCACATTGAATGAAGT
CACCCCTGGTCTGAAGGAAAAGTTGCCTCCAACAGATTCGAGGCTCAGAC
CTGACCAAAGGTGTTTGGAAAATGGGGAGTATGAGATGGCAAATTCAGAA
AAGTTGCGGCTAGAGCAGCGACAACGGCAGGCTCGGAAGATGCAAGAGAA
TGGCTGGAAGCCAAGATGGTTTGCAAAGGATAGGGCAACCGGTACATATC
GCTACATTGGCGGGTACTGGGAAGCGAGAGAAACAGGAGATTGGAACTTA
TGTCCTGATATATTTGGTCATATCCCTTCTGA
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