CX295304

Overview
NameCX295304
Unique NameCX295304
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12426 contig Ccv1_Contig12426:596..1323. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295304 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 408.297 bits (1048), Expect = 2.144e-113
Identity = 199/241 (82.57%), Postives = 217/241 (90.04%), Query Frame = 2
Query:    5 LIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLG 727
            LIVASTLQ++LGFSGLWRNV RF             GFGLYEFGFPGVAKC+EIGLP+L+I+VF+SQYLPHVIK GKN+FDRFAVIF+VVIVWIYAHLLTVGGAYN AAP TQ SCRTDRAG+I AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAF AV+RYASAT +PPS+LSRG+GWQGV IL+SGLFGT  G+SVSVENAGLLALTRVGSRRVVQI+AGFMIFFS+LG
Sbjct:  141 LIVASTLQMILGFSGLWRNVVRFLSPISAVPLVGLVGFGLYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNVFDRFAVIFAVVIVWIYAHLLTVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFVAVSRYASATMLPPSILSRGIGWQGVAILISGLFGTGAGSSVSVENAGLLALTRVGSRRVVQIAAGFMIFFSILG 381          
BLAST of CX295304 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 8.167e-105
Identity = 187/241 (77.59%), Postives = 205/241 (85.06%), Query Frame = 2
Query:    5 LIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLG 727
            LIVASTLQI+LGFSGLWRNV RF             G+GLYE GFPGVAKC+EIGLP L+I++ ISQY+PHVIK GK++F RFAVIFSV IVW+YA  LT+GGAYN     TQ SCRTDRAGLI AAPWIRVPWPFQWGAP FDAGEAFAMMMASFVALVESTGAF AV+RYASAT  PPSV+SRGVGWQGV IL+SGLFGT  G+SVSVENAGLLALT++GSRRVVQISAGFMIFFS+LG
Sbjct:  137 LIVASTLQIILGFSGLWRNVVRFLSPLSAAPLVGLVGYGLYELGFPGVAKCIEIGLPGLIILILISQYMPHVIKGGKHVFARFAVIFSVAIVWLYAFFLTLGGAYNGVGTDTQRSCRTDRAGLISAAPWIRVPWPFQWGAPLFDAGEAFAMMMASFVALVESTGAFIAVSRYASATMPPPSVISRGVGWQGVAILISGLFGTGIGSSVSVENAGLLALTKIGSRRVVQISAGFMIFFSILG 377          
BLAST of CX295304 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 354.369 bits (908), Expect = 3.674e-97
Identity = 171/241 (70.95%), Postives = 197/241 (81.74%), Query Frame = 2
Query:    5 LIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLG 727
            LIVAS LQIV+GFSGLWRNV R              GFGLYE GFP +AKC+EIGLP++++++  SQY+PH+I+  + +F RFAVIFSVVIVWIYAHLLTVGGAY +    TQ SCRTDR+GLI  +PWIRVP+PFQWG P+F AGEAFAMM  SFV+L+ESTG +  V+R+ASATP PPSVLSRGVGWQGVG+LL GLFG  NG SVSVENAGLLALTRVGSRRVVQISAGFMIFFS+LG
Sbjct:  147 LIVASILQIVVGFSGLWRNVVRLLSPLSAVPLVALAGFGLYEHGFPLLAKCIEIGLPEIILLLLFSQYIPHLIRGERQVFHRFAVIFSVVIVWIYAHLLTVGGAYKNTGVNTQTSCRTDRSGLISGSPWIRVPYPFQWGPPTFHAGEAFAMMAVSFVSLIESTGTYIVVSRFASATPPPPSVLSRGVGWQGVGVLLCGLFGAGNGASVSVENAGLLALTRVGSRRVVQISAGFMIFFSILG 387          
BLAST of CX295304 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.725e-92
Identity = 165/244 (67.62%), Postives = 200/244 (81.97%), Query Frame = 2
Query:    5 LIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRG--KNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWG-APSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLG 727
            LI+AS L I++GFSGLWRNVTRF             GFGLYE GFP +AKC+EIGLP+++++V  SQY+PH+++     N F RFAVIFSVVIVW+YA++LT+GGAY++    TQ SCRTDRAG+I A+PWIRVP P QWG AP+F+AG+ FAMM ASFV+LVESTG + AV+RYASATP+PPSVLSRG+GWQG GILL GLFG  N TSVSVENAGLLA+TRVGSRRV+Q++AGFMIFFS+LG
Sbjct:  145 LIIASFLHILVGFSGLWRNVTRFLSPLSAVPLVAFSGFGLYEQGFPMLAKCIEIGLPEIILLVIFSQYIPHLMQGETCSNFFHRFAVIFSVVIVWLYAYILTIGGAYSNTEINTQISCRTDRAGIISASPWIRVPHPIQWGGAPTFNAGDIFAMMAASFVSLVESTGTYIAVSRYASATPIPPSVLSRGIGWQGFGILLCGLFGAGNATSVSVENAGLLAVTRVGSRRVIQVAAGFMIFFSILG 388          
BLAST of CX295304 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 301.982 bits (772), Expect = 2.164e-81
Identity = 138/241 (57.26%), Postives = 182/241 (75.52%), Query Frame = 2
Query:    5 LIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLG 727
            LI+AS   +++GF GLWR + RF             G GL  F FP +A+C+EIGLP L+I++ +SQYLPH+ K  ++I ++FAV+F++ IVW YA +LT  GAY+     TQ SCRTDR+GLI A+PW+R+P+P QWG PSF   +AFAMM A++VA+VE+TG+F A +R+ SAT +PPSVLSRG+GWQG+G+LL+GLFGT  G++  VEN GLL LT+VGSRRVVQISAGFMIFFS+ G
Sbjct:  135 LIIASISHMIMGFFGLWRILVRFLSPLSAAPLVILTGVGLLAFAFPQLARCIEIGLPALIILIILSQYLPHLFKCKRSICEQFAVLFTIAIVWAYAEILTAAGAYDKRPDNTQLSCRTDRSGLISASPWVRIPYPLQWGRPSFHGSDAFAMMAATYVAIVETTGSFIAASRFGSATHIPPSVLSRGIGWQGIGVLLNGLFGTATGSTALVENTGLLGLTKVGSRRVVQISAGFMIFFSIFG 375          
BLAST of CX295304 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 6.297e-81
Identity = 147/241 (61.00%), Postives = 181/241 (75.10%), Query Frame = 2
Query:    5 LIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLG 727
            +IVAS++QI+LGFS +W   +RF             GFGL+  GFP V  CVEIGLP L++ V  SQYL +   R   + +RFA+I +++IVW YAH+LT  GAY     +TQ +CRTD + LI +APWI++P+P QWGAPSFDAG AFAMM A  V+L+ESTGAF A AR ASATP PP VLSRG+GWQG+GILL+GLFGT++G+SVSVEN GLL  TRVGSRRV+QISAGFMIFFS+LG
Sbjct:  135 IIVASSVQIILGFSQMWAICSRFFSPIGMVPVIALTGFGLFNRGFPVVGNCVEIGLPMLILFVIFSQYLKNFQFRQFPVVERFALIIALIIVWAYAHVLTASGAYKHRPHQTQLNCRTDMSNLISSAPWIKIPYPLQWGAPSFDAGHAFAMMAAVLVSLIESTGAFKAAARLASATPPPPHVLSRGIGWQGIGILLNGLFGTLSGSSVSVENIGLLGSTRVGSRRVIQISAGFMIFFSMLG 375          
BLAST of CX295304 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 5.163e-75
Identity = 130/239 (54.39%), Postives = 170/239 (71.13%), Query Frame = 2
Query:    5 LIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSV 721
            LI+A   Q V+GF G+WR   RF             G GL+ F FPGV KC+E+GLP LV++V  ++Y  H+  +G  +F R AV+ +VVI+WIYA +LT  GAYN+  P TQ SCR DR+G+I  +PW+R P+PFQWG P F   + FAM+ ASF +L+ESTG   AV+RY+ AT  PPSV SRG+GW+G+ I+L G+ GT+ GT+ SVENAGLLA+TRVGSRRV++ISA FMIFFS+
Sbjct:  136 LIIAGVFQAVVGFFGIWRVFIRFLSPLAAVPFVTLTGLGLFFFAFPGVTKCIEVGLPALVLLVIFAEYASHLFAKGSFVFSRCAVLVTVVIIWIYAEILTAAGAYNERGPVTQFSCRADRSGIIQGSPWVRFPYPFQWGYPIFCFQDCFAMLAASFASLIESTGTLIAVSRYSGATFCPPSVFSRGIGWEGISIILDGMCGTLTGTAASVENAGLLAVTRVGSRRVIKISALFMIFFSL 374          
BLAST of CX295304 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.272e-73
Identity = 127/248 (51.21%), Postives = 171/248 (68.95%), Query Frame = 2
Query:    5 LIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIF-------DRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLG 727
            LI+    Q+++   G+WRN+ RF             G GLY  GFP +A+CVE+GLP L++++F++QYLP  +K  K +        DR+ +I  + +VW++A LLT  G Y+  +  TQ SCRTDR GLI   PWI +P+PFQWG+P+FD  ++FAMM ASFV L ESTG F+A ARY SATP+PPSV+SRG  W GVG+LL+G+ G + G + S EN GLLA+T++GSRRV+QISA FMIFFS+ G
Sbjct:  145 LIITGCFQVLICILGVWRNIVRFLSPLSIAPLATFTGLGLYHIGFPLLARCVEVGLPGLILLIFVTQYLPRFLKMKKGVMILDGSRCDRYGMILCIPLVWLFAQLLTSSGVYDHKSHTTQTSCRTDRTGLITNTPWIYIPYPFQWGSPTFDITDSFAMMAASFVTLFESTGLFYASARYGSATPIPPSVVSRGTCWLGVGVLLNGMLGGITGITTSTENVGLLAMTKIGSRRVIQISAAFMIFFSIFG 392          
BLAST of CX295304 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 6.978e-72
Identity = 132/242 (54.55%), Postives = 169/242 (69.83%), Query Frame = 2
Query:    5 LIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIK-RGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLG 727
            LIVAS++QI+LG+S +W   +RF             G G+++ GFP +  C+EIGLP L++++ ++QYL HV   +   IF+RF ++  V IVWIYA +LT  GAY      TQ SCRTD+A LI  APW + P+P QWG P+F  G +FAMM A  V++VESTGA+ A +R A ATP P  VLSRG+GWQG+G+LL GLFGT  G++V VEN GLL LTRVGSRRVVQ+SAGFMI FS LG
Sbjct:  130 LIVASSIQIILGYSQVWGLFSRFFSPLGMAPVVGLVGLGMFQRGFPQLGNCIEIGLPMLLLVIGLTQYLKHVRPFKDVPIFERFPILICVTIVWIYAVILTASGAYRGKPSLTQHSCRTDKANLISTAPWFKFPYPLQWGPPTFSVGHSFAMMSAVLVSMVESTGAYIAASRLAIATPPPAYVLSRGIGWQGIGVLLDGLFGTGTGSTVLVENVGLLGLTRVGSRRVVQVSAGFMIVFSTLG 371          
BLAST of CX295304 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 251.521 bits (641), Expect = 3.354e-66
Identity = 118/241 (48.96%), Postives = 159/241 (65.98%), Query Frame = 2
Query:    5 LIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLG 727
            LI++S + I++G+   W N+ R                GL+  GFP +A CVEIGLP L++++   QYL H   R   I +R+A++  + I+W +A +LTV GAYN+ +  T+ SCRTDRA L+ +APWIR+P+PFQWG P F A   F M  A+ VA  ESTG FFA +R A AT  P  V+SR +G QG+G+LL G+FG++ G + SVEN GLL LTR+GSRRVVQ+S  FMIFFS+ G
Sbjct:  159 LIISSFVNIIIGYGQAWGNLIRIFSPIIVVPVVSVVSLGLFLRGFPLLANCVEIGLPMLILLIITQQYLKHAFSRISMILERYALLVCLAIIWAFAAILTVSGAYNNVSTATKQSCRTDRAFLMSSAPWIRIPYPFQWGTPIFKASHVFGMFGAAIVASAESTGVFFAASRLAGATAPPAHVVSRSIGLQGIGVLLEGIFGSITGNTASVENVGLLGLTRIGSRRVVQVSTFFMIFFSIFG 399          
The following BLAST results are available for this feature:
BLAST of CX295304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
NAT6_ARATH2.144e-11382.57Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH8.167e-10577.59Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH3.674e-9770.95Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT8_ARATH2.725e-9267.62Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT4_ARATH2.164e-8157.26Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT2_ARATH6.297e-8161.00Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
LPE1_MAIZE5.163e-7554.39Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT10_ARATH1.272e-7351.21Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT1_ARATH6.978e-7254.55Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT3_ARATH3.354e-6648.96Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC05070G10SK PhIFruit1 Citrus clementina cDNA clone C05070G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295304 ID=CX295304; Name=CX295304; organism=Citrus clementina; type=EST; length=727bp
GAGGCTCATTGTTGCTTCTACTCTTCAGATTGTCCTAGGCTTCAGTGGGC
TTTGGCGTAATGTTACAAGGTTTTTAAGTCCACTCTCAGTGGTTCCTTTG
ATTTCCCTAGTTGGTTTTGGGCTGTACGAGTTTGGTTTTCCTGGGGTTGC
CAAATGTGTGGAGATTGGACTGCCTCAACTCGTCATTATAGTATTTATTT
CACAGTATCTGCCTCATGTGATAAAACGTGGGAAAAATATCTTTGATCGT
TTTGCTGTCATATTTTCTGTGGTGATTGTGTGGATATATGCTCATCTACT
TACTGTGGGTGGGGCTTATAATGACGCTGCCCCTAAGACACAAGCAAGCT
GCCGAACTGATCGTGCTGGTCTCATTGATGCTGCTCCCTGGATAAGAGTT
CCATGGCCCTTCCAATGGGGGGCGCCTTCATTTGATGCTGGTGAAGCTTT
TGCCATGATGATGGCCTCCTTTGTTGCTCTTGTTGAGTCAACTGGTGCTT
TTTTTGCGGTAGCACGGTATGCAAGTGCAACTCCAATGCCACCTTCTGTT
CTCAGCCGTGGTGTGGGTTGGCAGGGAGTTGGCATTTTGCTTTCTGGGTT
ATTTGGAACTGTAAACGGAACATCGGTGTCTGTAGAGAATGCGGGTCTTT
TGGCCTTGACTAGAGTTGGCAGTCGAAGGGTTGTCCAAATATCTGCTGGA
TTCATGATATTCTTCTCTGTTCTTGGG
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