CX295312

Overview
NameCX295312
Unique NameCX295312
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295312 vs. ExPASy Swiss-Prot
Match: AI5L5_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.960e-30
Identity = 70/112 (62.50%), Postives = 82/112 (73.21%), Query Frame = -3
Query:  324 SNGDTSSVSPVPYMFNGSLRGRRFNGNVEKVVERRQRRMIKNRESAARSRARKQAYTMXXXXXXXXXXXXXXXXXXKQDEMMEMQKNQVLEMMNMQQGGKRRCLRRTQTGPW 659
            SNGD+SS+SP PYMFNG +RGR+ +G VEKVVERRQRRMIKNRESAARSRARKQAYT+                  KQ  +MEMQKNQ  EM N+ QGG ++ LRRT++GPW
Sbjct:  306 SNGDSSSLSPSPYMFNGGVRGRK-SGTVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEENDELQRKQARIMEMQKNQETEMRNLLQGGPKKKLRRTESGPW 416          
BLAST of CX295312 vs. ExPASy Swiss-Prot
Match: TRAB1_ORYSJ (bZIP transcription factor TRAB1 OS=Oryza sativa subsp. japonica GN=TRAB1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.830e-29
Identity = 74/124 (59.68%), Postives = 82/124 (66.13%), Query Frame = -3
Query:  324 APPSNGDTSS-VSPVPYMFNGSLRGRRFNGNVEKVVERRQRRMIKNRESAARSRARKQAYTMXXXXXXXXXXXXXXXXXXKQDEMM--------EMQKNQVLEMMNMQQGGKRRCLRRTQTGPW 668
            A   +GD SS ++PVPY F G +RGRR  GNVEKVVERRQRRMIKNRESAARSRARKQAYTM                  KQ+E+M        EMQKNQVLE +N   G K+RCLRRT TGPW
Sbjct:  195 AGKGDGDLSSPMAPVPYPFEGVIRGRRSGGNVEKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEQNMELQKKQEEIMEMQKNFFPEMQKNQVLEAVNNPYGQKKRCLRRTLTGPW 318          
BLAST of CX295312 vs. ExPASy Swiss-Prot
Match: AI5L7_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana GN=ABF4 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.521e-26
Identity = 63/112 (56.25%), Postives = 75/112 (66.96%), Query Frame = -3
Query:  324 SNGDTSSVSPVPYMFNGSLRGRRFNGNVEKVVERRQRRMIKNRESAARSRARKQAYTMXXXXXXXXXXXXXXXXXXKQDEMMEMQKNQVLEMMNMQQGGKRRCLRRTQTGPW 659
            S+ + +S+SPVPY+ N   RGRR N  +EKV+ERRQRRMIKNRESAARSRARKQAYT+                  KQ EM+EMQKN++ E      G KR+CLRRT TGPW
Sbjct:  323 SSAENNSLSPVPYVLN---RGRRSNTGLEKVIERRQRRMIKNRESAARSRARKQAYTLELEAEIEKLKKTNQELQKKQAEMVEMQKNELKETSKRPWGSKRQCLRRTLTGPW 431          
BLAST of CX295312 vs. ExPASy Swiss-Prot
Match: AI5L6_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arabidopsis thaliana GN=ABF3 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22
Identity = 62/115 (53.91%), Postives = 73/115 (63.48%), Query Frame = -3
Query:  324 PSNGDTSSVSPVPYMFNGSLRGRRFNGNVEKVVERRQRRMIKNRESAARSRARKQAYTMXXXXXXXXXXXXXXXXXXKQDEMMEMQKNQVLEMMNMQ--QGGKRRCLRRTQTGPW 662
            P +   +S+SPVPYMF    R R+    +EKV+ERRQ+RMIKNRESAARSRARKQAYTM                  KQ E+ME QKNQ+LE +      G KR+CLRRT TGPW
Sbjct:  343 PKSALDASLSPVPYMFG---RVRKTGAVLEKVIERRQKRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQVEIMEKQKNQLLEPLRQPWGMGCKRQCLRRTLTGPW 454          
BLAST of CX295312 vs. ExPASy Swiss-Prot
Match: AI5L4_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.915e-19
Identity = 55/105 (52.38%), Postives = 65/105 (61.90%), Query Frame = -3
Query:  324 SPVPYMFNGSLRGRRFNGNVEKVVERRQRRMIKNRESAARSRARKQAYTMXXXXXXXXXXXXXXXXXXKQDEMMEMQKNQVLEMMNMQQ-GGKRRCLRRTQTGPW 635
            SPVPY+F    RGRR N  +EKVVERRQ+RMIKNRESAARSRARKQAYT+                  KQ E+M+   +++ E         KR+CLRRT TGPW
Sbjct:  291 SPVPYVFG---RGRRSNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEAEIESLKLVNQDLQKKQAEIMKTHNSELKEFSKQPPLLAKRQCLRRTLTGPW 392          
BLAST of CX295312 vs. ExPASy Swiss-Prot
Match: ABI5_ARATH (Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 45/104 (43.27%), Postives = 54/104 (51.92%), Query Frame = -3
Query:  327 GSLRGRR--FNGNVEKVVERRQRRMIKNRESAARSRARKQAYTMXXXXXXXXXXXXXXXXXXKQDEMMEMQKNQVLEMMNM-------QQGGKRRCLRRTQTGP 611
            G LRGR+   +G VEKVVERRQRRMIKNRESAARSRARKQAYT+                     E+   +K Q  E +         +  G+ R L R  + P
Sbjct:  338 GGLRGRKRVVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKHALAELERKRKQQYFESLKSRAQPKLPKSNGRLRTLMRNPSCP 441          
The following BLAST results are available for this feature:
BLAST of CX295312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
AI5L5_ARATH1.960e-3062.50ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arab... [more]
TRAB1_ORYSJ2.830e-2959.68bZIP transcription factor TRAB1 OS=Oryza sativa su... [more]
AI5L7_ARATH8.521e-2656.25ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arab... [more]
AI5L6_ARATH1.504e-2253.91ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arab... [more]
AI5L4_ARATH5.915e-1952.38ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arab... [more]
ABI5_ARATH5.928e-1143.27Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionC05070H06SK PhIFruit1 Citrus clementina cDNA clone C05070H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295312 ID=CX295312; Name=CX295312; organism=Citrus clementina; type=EST; length=673bp
GAGGCCTCGTGCCGTTTTTTTTTTTTTTTTTTTTTTTTCAGAAAAATGTT
TCGAGAAACGATAAGTTAACGATCTGGACAAGCTCTGAAATATATGTCAA
ACGACAGATAACTAAGGGCCAAATATTTTGCTTCTCTTCTCCTAGCCAAT
CATGATGCTCGGAAGAGAGGCTAATATTGGAAGATAAAAAAACTACAGCA
CACTACAATATTATTCTCTTTAATCTACAACTGAACCAAGTGTCTGCCTC
AAAATATGTACAGCCAACCACTAGCATACATTATCTTCAAGCACAAAATC
ACAAGCCCGCCCTTTCCACTTTACCATGGACCAGTCTGTGTCCGTCTCAA
GCACCGTCTCTTGCCTCCCTGTTGCATATTCATCATCTCCAAGACCTGAT
TTTTCTGCATTTCCATCATTTCATCCTGTTTCTTCCGTAATTCTTCGTTC
TCTTCTTTTAACTTTGCAACTTCTGCTTCCAATTCCATAGTATAAGCCTG
CTTACGAGCCCGAGACCTTGCAGCTGACTCTCTGTTCTTTATCATTCTCC
TCTGCCTCCTCTCAACAACCTTCTCCACATTCCCATTGAATCTCCTCCCC
CTTAAACTTCCATTGAACATGTAAGGAACCGGCGACACTGAAGAAGTATC
CCCATTACTCGGGGGGGCCCGGT
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