CX295324
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN126_HUMAN (RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.279e-23 Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 3 Query: 12 GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 275 GL+ + QL + GPPPA + I A+PTV +T+ H+ S CPVC+D + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Sbjct: 185 GLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN126_BOVIN (RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 3 Query: 12 GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 275 GL+ + QL + GPPPA + I A+PTV +T+ H+ S CPVC+D + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Sbjct: 188 GLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN126_XENTR (RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23 Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = 3 Query: 12 GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 275 GL+ + QL + GPPPA I A+PT++IT+ H+ S CPVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Sbjct: 183 GLDTIITQLLNQFENTGPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN126_MOUSE (RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23 Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 3 Query: 12 GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 275 GL+ + QL + GPPPA + I A+PTV +T+ H+ S CPVC++ + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Sbjct: 187 GLDTIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: R126A_XENLA (RING finger protein 126-A OS=Xenopus laevis GN=rnf126-A PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.627e-22 Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = 3 Query: 12 GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 275 GL+ + QL + GPPPA I A+PT++IT+ H+ S CPVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Sbjct: 184 GLDTIITQLLNQFENTGPPPADNEKIQALPTIQITEEHVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: R126B_XENLA (RING finger protein 126-B OS=Xenopus laevis GN=rnf126-B PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 3 Query: 12 GLEELFEQL-SANGRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 275 GL+ + QL + GPPPA I A+PT++IT+ H+ CPVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Sbjct: 184 GLDTIITQLLNQFENTGPPPADTDKIQALPTIQITEEHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN115_MOUSE (RING finger protein 115 OS=Mus musculus GN=Rnf115 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 3 Query: 12 GLEELFEQLSAN-GRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 275 GL+ + QL GPPPA + I ++PTV +TQ + + CPVC++ + + + RQ+PCNH +HS CIVPWL H++CPVCR+ L Sbjct: 185 GLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN115_HUMAN (RING finger protein 115 OS=Homo sapiens GN=RNF115 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 3 Query: 12 GLEELFEQLSAN-GRRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 275 GL+ + QL GPPPA + I ++PTV +TQ + CPVC++ + + E RQ+PCNH +HS CIVPWL H++CPVCR+ L Sbjct: 184 GLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase rnf181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.862e-18 Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 51 RRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 278 +R PPPAA+ ++++P V +T + CPVC +FE G RQ+PC H++HS CI+PWL + NSCP+CR ELP Sbjct: 49 QRLPPPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELP 124
BLAST of CX295324 vs. ExPASy Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase rnf181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 51 RRGPPPAARSAIDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 278 +R PPPA++ ++++P V +T + CPVC +FE G RQ+PC H++HS CI+PWL + NSCP+CR ELP Sbjct: 49 QRLPPPASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELP 124 The following BLAST results are available for this feature:
BLAST of CX295324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295324 ID=CX295324; Name=CX295324; organism=Citrus clementina; type=EST; length=698bpback to top |