CX295326
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295326 vs. ExPASy Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.670e-37 Identity = 83/194 (42.78%), Postives = 123/194 (63.40%), Query Frame = 1 Query: 4 REVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDAPF-VFNDSCLVAFEKLKHLLTSSPIIQPPNWSLPFELMCDASDYAVGAVLGQRVDLIPHVIYYASMTLNDAQLNYSTTEKEMLAVVFALEKFRSYLIGCKIIIFTDHAALKYLLTKKDAKTRLIRWVLLLQEFDLEFKDKKGTENIVADHLSRLHFDTT 582 +E+++FLG G+YR+FI +F+ +++P+ L K+ N AF+KLK+L++ PI++ P+++ F L DASD A+GAVL Q H + Y S TLN+ ++NYST EKE+LA+V+A + FR YL+G I +DH L +L KD ++L RW + L EFD + K KG EN VAD LSR+ + T Sbjct: 440 KEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQD----GHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSRIKLEET 629
BLAST of CX295326 vs. ExPASy Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.120e-33 Identity = 79/192 (41.15%), Postives = 118/192 (61.46%), Query Frame = 1 Query: 4 REVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDAPFVFND-SCLVAFEKLKHLLTSSPIIQPPNWSLPFELMCDASDYAVGAVLGQRVDLIPHVIYYASMTLNDAQLNYSTTEKEMLAVVFALEKFRSYLIGCKIIIFTDHAALKYLLTKKDAKTRLIRWVLLLQEFDLEFKDKKGTENIVADHLSRLHFD 576 +E+R+FLG G+YR+FI +++ +++P+ + L K + AFEKLK L+ PI+Q P++ F L DAS+ A+GAVL Q H I + S TLND +LNYS EKE+LA+V+A + FR YL+G + +I +DH L++L K+ +L RW + L E+ + KG EN VAD LSR+ + Sbjct: 439 KEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQN----GHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSRIKIE 626
BLAST of CX295326 vs. ExPASy Swiss-Prot
Match: POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.496e-33 Identity = 77/201 (38.31%), Postives = 120/201 (59.70%), Query Frame = 1 Query: 1 VREVRSFLGHAGFYRRFIKDFSKVSRPLCNLL-----------AKDAPFVFNDSCLVAFEKLKHLLTSSPIIQPPNWSLPFELMCDASDYAVGAVLGQRVDLIPHVIYYASMTLNDAQLNYSTTEKEMLAVVFALEKFRSYLIGCKII-IFTDHAALKYLLTKKDAKTRLIRWVLLLQEFDLEFKDKKGTENIVADHLSRL 567 V+E++ FLG +YR+FI+D++KV++PL NL + P +++ L +F LK +L SS I+ P ++ PF L DAS++A+GAVL Q I Y S +LN + NY+T EKEMLA++++L+ R+YL G I ++TDH L + L ++ +L RW ++E++ E K G N+VAD LSR+ Sbjct: 355 VKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSRI 555
BLAST of CX295326 vs. ExPASy Swiss-Prot
Match: POLY_DROME (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.085e-28 Identity = 76/201 (37.81%), Postives = 118/201 (58.71%), Query Frame = 1 Query: 1 VREVRSFLGHAGFYRRFIKDFSKVSRPLCNLL-----------AKDAPFVFNDSCLVAFEKLKHLLTSSPII-QPPNWSLPFELMCDASDYAVGAVLGQRVDLIPHVIYYASMTLNDAQLNYSTTEKEMLAVVFALEKFRSYLIGCK-IIIFTDHAALKYLLTKKDAKTRLIRWVLLLQEFDLEFKDKKGTENIVADHLSR 564 V +VRSFLG A +YR FIKDF+ ++RP+ ++L +K P FN++ AF++L+++L S +I + P++ PF+L DAS +GAVL Q I S TL + NY+T E+E+LA+V+AL K +++L G + I IFTDH L + + ++ ++ RW + + + + K G EN VAD LSR Sbjct: 414 VYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQE----GRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSR 610
BLAST of CX295326 vs. ExPASy Swiss-Prot
Match: RTF23_SCHPO (Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.200e-27 Identity = 79/203 (38.92%), Postives = 117/203 (57.64%), Query Frame = 1 Query: 4 REVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDAPFVFNDSCLVAFEKLKHLLTSSPIIQPPNWSLPFELMCDASDYAVGAVLGQRVDLIPHV-IYYASMTLNDAQLNYSTTEKEMLAVVFALEKFRSYLIGC--KIIIFTDHAALKYLLTKKD--AKTRLIRWVLLLQEFDLEFKDKKGTENIVADHLSRLHFDTTTEPLP 597 +E+R FLG + R+FI S+++ PL NLL KD + + + A E +K L S P+++ ++S L DASD AVGAVL Q+ D + + Y S ++ AQLNYS ++KEMLA++ +L+ +R YL I TDH L +T + RL RW L LQ+F+ E + G+ N +AD LSR+ + TEP+P Sbjct: 640 KELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDE--TEPIP 840
BLAST of CX295326 vs. ExPASy Swiss-Prot
Match: RTF22_SCHPO (Retrotransposable element Tf2 155 kDa protein type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.200e-27 Identity = 79/203 (38.92%), Postives = 117/203 (57.64%), Query Frame = 1 Query: 4 REVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDAPFVFNDSCLVAFEKLKHLLTSSPIIQPPNWSLPFELMCDASDYAVGAVLGQRVDLIPHV-IYYASMTLNDAQLNYSTTEKEMLAVVFALEKFRSYLIGC--KIIIFTDHAALKYLLTKKD--AKTRLIRWVLLLQEFDLEFKDKKGTENIVADHLSRLHFDTTTEPLP 597 +E+R FLG + R+FI S+++ PL NLL KD + + + A E +K L S P+++ ++S L DASD AVGAVL Q+ D + + Y S ++ AQLNYS ++KEMLA++ +L+ +R YL I TDH L +T + RL RW L LQ+F+ E + G+ N +AD LSR+ + TEP+P Sbjct: 640 KELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDE--TEPIP 840
BLAST of CX295326 vs. ExPASy Swiss-Prot
Match: RTF21_SCHPO (Retrotransposable element Tf2 155 kDa protein type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.200e-27 Identity = 79/203 (38.92%), Postives = 117/203 (57.64%), Query Frame = 1 Query: 4 REVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDAPFVFNDSCLVAFEKLKHLLTSSPIIQPPNWSLPFELMCDASDYAVGAVLGQRVDLIPHV-IYYASMTLNDAQLNYSTTEKEMLAVVFALEKFRSYLIGC--KIIIFTDHAALKYLLTKKD--AKTRLIRWVLLLQEFDLEFKDKKGTENIVADHLSRLHFDTTTEPLP 597 +E+R FLG + R+FI S+++ PL NLL KD + + + A E +K L S P+++ ++S L DASD AVGAVL Q+ D + + Y S ++ AQLNYS ++KEMLA++ +L+ +R YL I TDH L +T + RL RW L LQ+F+ E + G+ N +AD LSR+ + TEP+P Sbjct: 640 KELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDE--TEPIP 840
BLAST of CX295326 vs. ExPASy Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=4 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.327e-26 Identity = 70/185 (37.84%), Postives = 103/185 (55.68%), Query Frame = 1 Query: 13 RSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDAPFVFNDSCLVAFEKLKHLLTSSPIIQPPNWSLPFELMCDASDYAVGAVLGQRVDLIPHVIYYASMTLNDAQLNYSTTEKEMLAVVFALEKFRSYLIGCKIIIFTDHAALKYLLTKKDAKTRLIRWVLLLQEFDLEFKDKKGTENIVADHLSRL 567 R F+ +YRRFIK+F+ SR + L K+ PF + D C AF LK L + ++Q P++S F + DAS A GAVL Q + + YAS + N STTE+E+ A+ +A+ FR Y+ G + TDH L YL + + ++L R L L+E++ + KG +N VAD LSR+ Sbjct: 551 RRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSSKLTRIRLELEEYNFTVEYLKGKDNHVADALSRI 735
BLAST of CX295326 vs. ExPASy Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.416e-22 Identity = 67/198 (33.84%), Postives = 103/198 (52.02%), Query Frame = 1 Query: 1 VREVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDAPFVFNDSCLVAFEKLKHLLTSSPIIQPPNWSLPFELMCDASDYAVGAVLGQ--RVDLIPHVIYYASMTLNDAQLNYSTTEKEMLAVVFALEKFRSYLIGCKIIIFTDHAALKYLLTKKDAKTRLIRWVLLLQEFDLEFKDKKGTENIVADHLSRLHFDTTTE 588 V++ + FLG +YRRFI + SK+++P+ + + + A EKLK L +SP++ P N + L DAS +GAVL + + + V+ Y S +L AQ NY E E+L ++ AL FR L G + TDH +L L K + R+ RW+ L +D + G +N+VAD +SR + T E Sbjct: 847 VKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQD--KAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYTITPE 1042
BLAST of CX295326 vs. ExPASy Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 7.532e-22 Identity = 66/198 (33.33%), Postives = 103/198 (52.02%), Query Frame = 1 Query: 1 VREVRSFLGHAGFYRRFIKDFSKVSRPLCNLLAKDAPFVFNDSCLVAFEKLKHLLTSSPIIQPPNWSLPFELMCDASDYAVGAVLGQ--RVDLIPHVIYYASMTLNDAQLNYSTTEKEMLAVVFALEKFRSYLIGCKIIIFTDHAALKYLLTKKDAKTRLIRWVLLLQEFDLEFKDKKGTENIVADHLSRLHFDTTTE 588 V++ + FLG +YRRFI + SK+++P+ + + + A +KLK L +SP++ P N + L DAS +GAVL + + + V+ Y S +L AQ NY E E+L ++ AL FR L G + TDH +L L K + R+ RW+ L +D + G +N+VAD +SR + T E Sbjct: 821 VKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQD--KAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPE 1016 The following BLAST results are available for this feature:
BLAST of CX295326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295326 ID=CX295326; Name=CX295326; organism=Citrus clementina; type=EST; length=673bpback to top |