CX295353

Overview
NameCX295353
Unique NameCX295353
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295353 vs. ExPASy Swiss-Prot
Match: SYEC_SCHPO (Probable glutamyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC17A5.15c PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.020e-42
Identity = 87/174 (50.00%), Postives = 112/174 (64.37%), Query Frame = -3
Query:  155 PFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPVVLFVIPDGR 676
            P+    PRHKK    G K + +   I I+ ADAQ    +EE+TLMDWGNA V+EI+RD  G VT L   LHL+G  K T+ K+TWL +T +   + LV FDYLITK KLEEGE++ D L P T F +    D  ++NLK+G+I+Q+ERKGY+  DVPF       VLF IPDG+
Sbjct:  536 PYAEDRPRHKKNPELGNKKSIFANEILIEQADAQSFKQDEEVTLMDWGNAYVREINRDASGKVTSLKLELHLDGDFKKTEKKVTWLADTEDKTPVDLVDFDYLITKDKLEEGENYKDFLTPQTEFHSPVFADVGIKNLKKGDIIQVERKGYYIVDVPF--DGTQAVLFNIPDGK 707          
BLAST of CX295353 vs. ExPASy Swiss-Prot
Match: SYEC_YEAST (Glutamyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=GUS1 PE=1 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 8.936e-39
Identity = 83/174 (47.70%), Postives = 113/174 (64.94%), Query Frame = -3
Query:  155 PFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPVVLFVIPDGR 676
            P + + P+HKK    GEK   Y K I +D  DA +I+ +EE+TLMDWGN I+ +  ++ DG++      L+LEG  K TK KLTWL +T ++V + LV FD+LITK +LEE E F D L P T F T AI D N++++K G+I+Q ERKGY+R D    +  KP V F IPDG+
Sbjct:  532 PKIEMKPKHKKNPAVGEKKVIYYKDIVVDKDDADVINVDEEVTLMDWGNVIITK--KNDDGSMVAK---LNLEGDFKKTKHKLTWLADTKDVVPVDLVDFDHLITKDRLEEDESFEDFLTPQTEFHTDAIADLNVKDMKIGDIIQFERKGYYRLDA-LPKDGKPYVFFTIPDGK 699          
BLAST of CX295353 vs. ExPASy Swiss-Prot
Match: SYEC_DICDI (Probable glutamyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=gluS PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.095e-28
Identity = 67/174 (38.51%), Postives = 101/174 (58.05%), Query Frame = -3
Query:  158 PFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWL-PETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPVVLFVIPDG 676
            P V+   ++ K    G K  T++  + ++  D   I   EE+TLM+WGNAIV+ + R+++G+V  ++G LHLEG VK T  KL+WL  +  + V + L  +DY+ITK KLE+G+D     N  ++FE  A  D N+  LK  + +Q ER+G+F  D       KP +L  IP G
Sbjct:  555 PEVKDCLKYAKDPSMGTKKVTFSNNLLLEGDDCNQIKEGEEVTLMNWGNAIVETLQRNENGDVVSMTGKLHLEGDVKKTDKKLSWLSSDCADTVTVVLQDYDYIITKPKLEDGDDLDTFTNKNSKFEIEAFTDENILTLKLNDKIQFERRGFFNVD-QVGDGVKPYILIYIPSG 727          
BLAST of CX295353 vs. ExPASy Swiss-Prot
Match: SYEP_MOUSE (Bifunctional aminoacyl-tRNA synthetase OS=Mus musculus GN=Eprs PE=2 SV=3)

HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26
Identity = 61/176 (34.66%), Postives = 101/176 (57.39%), Query Frame = -3
Query:  158 IPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNL--TLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSS------KPVVLFVIPDG 661
            + RH K    G K   Y+ +++I+ ADA+  S  E +T ++WGN  + +I ++ DG +T L   L+LE        K+TWL E+   +++    V +++LITK  L + EDF   +N  ++ E   +GD  +++LK+G+I+QL+R+G+F CD P+   S       P +L  IPDG
Sbjct:  530 VARHPKNPDVGLKPVWYSPKVFIEGADAETFSEGEMVTFINWGNINITKIHKNADGKITSLDAKLNLENKDYKKTTKITWLAESTHALSIPAVCVTYEHLITKPVLGKDEDFKQYINKDSKHEELMLGDPCLKDLKKGDIIQLQRRGFFICDQPYEPVSPYSCREAPCILIYIPDG 705          
BLAST of CX295353 vs. ExPASy Swiss-Prot
Match: SYEP_DROME (Bifunctional aminoacyl-tRNA synthetase OS=Drosophila melanogaster GN=Aats-glupro PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26
Identity = 63/179 (35.20%), Postives = 99/179 (55.31%), Query Frame = -3
Query:  143 HKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWL---PETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVP------FTRSSKPVVLFVIPDGRQQAV 652
            H K E  G+K      RI+ID+ DA+ +   E  T ++WGN +++++++D  GN+T +   L+LE       LKLTWL    + +       V FD +I+K  L + EDF   +   TR E   +GD  ++  K+G+I+QL+R+G+F+ DV       +T    P+VLF IPDG  + V
Sbjct:  539 HPKDESLGKKTVLLGPRIYIDYVDAEALKEGENATFINWGNILIRKVNKDASGNITSVDAALNLENKDFKKTLKLTWLAVEDDPSAYPPTFCVYFDNIISKAVLGKDEDFKQFIGHKTRDEVPMLGDPELKKCKKGDIIQLQRRGFFKVDVAYAPPSGYTNVPSPIVLFSIPDGHTKDV 717          
BLAST of CX295353 vs. ExPASy Swiss-Prot
Match: SYEP_HUMAN (Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens GN=EPRS PE=1 SV=5)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 61/176 (34.66%), Postives = 100/176 (56.82%), Query Frame = -3
Query:  158 IPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTL--VGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSS------KPVVLFVIPDG 661
            + +H K    G K   Y+ +++I+ ADA+  S  E +T ++WGN  + +I ++ DG +  L   L+LE        K+TWL ET   + + +  V +++LITK  L + EDF   +N  ++ E   +GD  +++LK+G+I+QL+R+G+F CD P+   S       P VL  IPDG
Sbjct:  530 VAKHPKNPEVGLKPVWYSPKVFIEGADAETFSEGEMVTFINWGNLNITKIHKNADGKIISLDAKLNLENKDYKKTTKVTWLAETTHALPIPVICVTYEHLITKPVLGKDEDFKQYVNKNSKHEELMLGDPCLKDLKKGDIIQLQRRGFFICDQPYEPVSPYSCKEAPCVLIYIPDG 705          
BLAST of CX295353 vs. ExPASy Swiss-Prot
Match: SYEC_ENCCU (Probable glutamyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU02_1210 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.361e-17
Identity = 52/165 (31.52%), Postives = 88/165 (53.33%), Query Frame = -3
Query:  188 IPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCD-------VPFTRSSK 661
            +P+HKK    G K   Y+ +I +   D +++  NEE TLM+WGNAIVK     ++G VT++   L+ +G  K TK K++W+ +    V + L  +  L+     E+ ED     N  +  +     +S + N++ GE++Q ER G++ CD       +PFT+  +
Sbjct:  480 VPKHKKNGDLGTKEVFYSSQILLSQEDGRVLQDNEEFTLMNWGNAIVKS-KTVENGTVTKMEVSLNPDGDFKLTKNKMSWVSKRGS-VTVELAEYGNLMND---EDTEDLALRFNRNSVKKEYWYAESAIINVREGEVIQFERNGFYYCDGFLVFNLLPFTKQKR 639          
BLAST of CX295353 vs. ExPASy Swiss-Prot
Match: SYEC_ENTBH (Probable glutamyl-tRNA synthetase, cytoplasmic OS=Enterocytozoon bieneusi (strain H348) GN=EBI_22577 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.175e-14
Identity = 53/171 (30.99%), Postives = 89/171 (52.05%), Query Frame = -3
Query:  149 IPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPVVLFVIPDGRQQ 661
            IP+ KK    G K    +  I I   DA +++ NEE TLM+WGN  VKE  +  +G + ++    +L G VKTTK KLTW+ + N ++   ++ +D L   K     ++  +  N  ++ E   +G+  + ++     +Q+ER G+F CD       KP+   +IP  +Q+
Sbjct:  470 IPKFKKNLSLGNKTIIKSSHILISQEDANILNNNEEFTLMNWGNMKVKE-KQIVNGIIIKIILEENLAGDVKTTKNKLTWVNKEN-IIEFKILEYDTLQNDKNT---DNLAEKFNTNSKKEEIWLGEKALISVSPKTYIQIERIGFFICD-------KPLEFILIPYTKQK 628          
BLAST of CX295353 vs. ExPASy Swiss-Prot
Match: SYEC_NOSCE (Probable glutamyl-tRNA synthetase, cytoplasmic OS=Nosema ceranae (strain BRL01) GN=NCER_102160 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.781e-13
Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = -3
Query:  188 FVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRG-EILQLERKGYFRCD-------VPFTRSSK 673
            + + IP +KK    G K   ++  +     D  ++  NEE TLM+WGNAIV E    ++  VT+L   LHLEG  K+T  K++W+ E+     +T  G +Y     KL   E+F    N  ++ +     +S++ NL    + +Q ER G+F CD       VPFT+  +
Sbjct:  455 YTKNIPLNKKNTSLGSKDVLFSDTLLFSQEDGFVLKENEEFTLMNWGNAIV-EKKVVENSIVTELYIKLHLEGDYKSTTNKISWVSESGA---VTATGIEY----GKLLVNEEF----NINSKIDKQYYVESSITNLSTDMKHVQFERIGFFYCDSPCVFHLVPFTKQKR 612          
The following BLAST results are available for this feature:
BLAST of CX295353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
SYEC_SCHPO1.020e-4250.00Probable glutamyl-tRNA synthetase, cytoplasmic OS=... [more]
SYEC_YEAST8.936e-3947.70Glutamyl-tRNA synthetase, cytoplasmic OS=Saccharom... [more]
SYEC_DICDI1.095e-2838.51Probable glutamyl-tRNA synthetase, cytoplasmic OS=... [more]
SYEP_MOUSE1.338e-2634.66Bifunctional aminoacyl-tRNA synthetase OS=Mus musc... [more]
SYEP_DROME1.338e-2635.20Bifunctional aminoacyl-tRNA synthetase OS=Drosophi... [more]
SYEP_HUMAN1.480e-2534.66Bifunctional aminoacyl-tRNA synthetase OS=Homo sap... [more]
SYEC_ENCCU7.361e-1731.52Probable glutamyl-tRNA synthetase, cytoplasmic OS=... [more]
SYEC_ENTBH1.175e-1430.99Probable glutamyl-tRNA synthetase, cytoplasmic OS=... [more]
SYEC_NOSCE3.781e-1332.35Probable glutamyl-tRNA synthetase, cytoplasmic OS=... [more]
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Properties
Property NameValue
Genbank descriptionC05071C11SK PhIFruit1 Citrus clementina cDNA clone C05071C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295353 ID=CX295353; Name=CX295353; organism=Citrus clementina; type=EST; length=678bp
AAAAACAGTAAATCAATTAATTAAGTCAACAGTGGTTCAAAAATATGCGA
ATGGAAATGTAAGAAATAAAGTTTCCCAATCACAGCTAAATAAACTCATA
AAGACAGTGGACACCTTAATAAGTATAAAGGTTTTACTTAAAGACTGCTT
GCTGGCGCCCATCTGGGATGACAAAGAGAACCACTGGCTTTGAAGATCTG
GTAAAAGGAACATCGCATCTGAAGTAGCCCTTCCTCTCCAGTTGCAAAAT
CTCTCCCCGCTTCAGATTCCGCATGTTTGAATCTCCAATAGCTGCAGTCT
CAAATCTTGTACAGGGGTTGAGCACATCAAGGAAGTCCTCTCCTTCTTCC
AGCTTCTTCTTTGTGATTAGATAGTCAAAGCCAACCAATGTGAGGTTAAC
TAACTCATTTGTCTCAGGTAGCCATGTGAGCTTCAACTTTGTGGTCTTGA
CAGATCCTTCAAGATGCAAAAACCCTGATAATTGTGTAACATTTCCATCC
TGGTCCCTACTAATTTCTTTTACTATGGCATTCCCCCAATCCATTAAAGT
AATTTCCTCATTCGCAGAAATCAGCTGAGCATCAGCATGGTCTATCCATA
TCCTTTTTGTGTATGTCGTAGCTTTTTCTCCTGCACCTTCATACTTCTTA
TGCCTTGGGATTATGCGCACAAATGGTT
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