CX295354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIA_MOUSE (Rab GDP dissociation inhibitor alpha OS=Mus musculus GN=Gdi1 PE=1 SV=3) HSP 1 Score: 263.462 bits (672), Expect = 7.495e-70 Identity = 127/205 (61.95%), Postives = 165/205 (80.49%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D YL++P L+T Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQILEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIA_RAT (Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus GN=Gdi1 PE=1 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 9.789e-70 Identity = 127/205 (61.95%), Postives = 165/205 (80.49%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D YL++P L+T Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIA_PONPY (Rab GDP dissociation inhibitor alpha OS=Pongo pygmaeus GN=GDI1 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 9.789e-70 Identity = 127/205 (61.95%), Postives = 165/205 (80.49%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D YL++P L+T Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIA_PANTR (Rab GDP dissociation inhibitor alpha OS=Pan troglodytes GN=GDI1 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 9.789e-70 Identity = 127/205 (61.95%), Postives = 165/205 (80.49%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D YL++P L+T Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIA_MACFA (Rab GDP dissociation inhibitor alpha OS=Macaca fascicularis GN=GDI1 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 9.789e-70 Identity = 127/205 (61.95%), Postives = 165/205 (80.49%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D YL++P L+T Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIA_HUMAN (Rab GDP dissociation inhibitor alpha OS=Homo sapiens GN=GDI1 PE=1 SV=2) HSP 1 Score: 263.077 bits (671), Expect = 9.789e-70 Identity = 127/205 (61.95%), Postives = 165/205 (80.49%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D YL++P L+T Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIA_BOVIN (Rab GDP dissociation inhibitor alpha OS=Bos taurus GN=GDI1 PE=1 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 9.789e-70 Identity = 127/205 (61.95%), Postives = 165/205 (80.49%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D YL++P L+T Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIA_CANFA (Rab GDP dissociation inhibitor alpha OS=Canis familiaris GN=GDI1 PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.670e-69 Identity = 126/205 (61.46%), Postives = 165/205 (80.49%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSF+Y GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D YL++P L+T Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPEAMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFIYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQSTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIB_BOVIN (Rab GDP dissociation inhibitor beta OS=Bos taurus GN=GDI2 PE=2 SV=3) HSP 1 Score: 258.455 bits (659), Expect = 2.411e-68 Identity = 123/205 (60.00%), Postives = 163/205 (79.51%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ ++ L+KRF+ PPA +G RD+NVD+IPKF++ANG LV++L+ T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DENDP+T EG+D + + RE+ K+ L + IDF GHALAL+R D YL++P +T Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGAPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGIDPKKTSMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCET 205
BLAST of CX295354 vs. ExPASy Swiss-Prot
Match: GDIB_PIG (Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.371e-68 Identity = 123/205 (60.00%), Postives = 161/205 (78.54%), Query Frame = 2 Query: 65 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDT 676 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+ ++ L+KRF PPA +G RD+NVD+IPKF++ANG LV++L+ T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DENDP+T EG+D + RE+ K+ L + IDF GHALAL+R D YL++P +T Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFNIPGAPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGVDPKKTAMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCET 205 The following BLAST results are available for this feature:
BLAST of CX295354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295354 ID=CX295354; Name=CX295354; organism=Citrus clementina; type=EST; length=678bpback to top |