CX295359

Overview
NameCX295359
Unique NameCX295359
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length621
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig640 contig Ccv1_Contig640:1..620. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295359 vs. ExPASy Swiss-Prot
Match: U131_ARATH (UPF0131 protein At3g02910 OS=Arabidopsis thaliana GN=At3g02910 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.479e-33
Identity = 62/102 (60.78%), Postives = 72/102 (70.59%), Query Frame = 2
Query:   44 THLIFSYGTLKRGFPNHYLMQQLMDQNAAVFLGPYCTHESYPLVCGPYNIPYLINLPGSGNRVKGELYSVSTQGLARLDELEGTWFGHYERLPIRLIEGGRE 349
            T L+F+YGTLKRGF NH LMQ L+    A F G Y T + YPLVCGPY +P+L+N PGSG  V GELY+VS +GL+RLDELEG   GHY R PIRL     E
Sbjct:    6 TTLVFTYGTLKRGFSNHVLMQDLIRSGDASFKGVYQTLDKYPLVCGPYRVPFLLNKPGSGYHVNGELYAVSPRGLSRLDELEGISRGHYIRQPIRLAAAEEE 107          

HSP 2 Score: 36.1946 bits (82), Expect = 3.479e-33
Identity = 17/55 (30.91%), Postives = 29/55 (52.73%), Query Frame = 3
Query:  396 EGYFANRSFGEGLWEKKGKVGMNEYTEYDGQEYVAIDKRAKGVCIAEEIASFLSS 560
            E Y+A++S+ E LW +        YTE + + YV  + R + +   + I  F+SS
Sbjct:  125 EAYYAHKSYEEELWRRNRGRSFGAYTENEARGYVKRNDRPQHLSFLDHIRIFVSS 179          
BLAST of CX295359 vs. ExPASy Swiss-Prot
Match: A2LD1_RAT (AIG2-like domain-containing protein 1 OS=Rattus norvegicus GN=A2ld1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.294e-14
Identity = 50/100 (50.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query:   53 IFSYGTLKRGFPNHYLMQQLMDQN--AAVFLGPYCTHESYPLV-CGPYNIPYLINLPGSGNRVKGELYSVSTQGLARLDELEGTWFGHYER--LPIRLIE 337
            IF YGTLKRG PNH +M   +DQ+   A F G  CT ES+PLV  G +NIP+L++LPG G+ V GE+Y V  Q L  LD+ EG     Y+R  L +R++E
Sbjct:    4 IFVYGTLKRGQPNHKVM---LDQSHGLATFRGRGCTVESFPLVIAGEHNIPWLLHLPGKGHCVAGEIYEVDEQMLRFLDDFEGC-PSMYQRTALQVRVLE 99          
BLAST of CX295359 vs. ExPASy Swiss-Prot
Match: A2LD1_MOUSE (AIG2-like domain-containing protein 1 OS=Mus musculus GN=a2ld1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.162e-13
Identity = 42/80 (52.50%), Postives = 50/80 (62.50%), Query Frame = 2
Query:   53 IFSYGTLKRGFPNHYLMQQLMDQNAAVFLGPYCTHESYPLV-CGPYNIPYLINLPGSGNRVKGELYSVSTQGLARLDELE 289
            IF YGTLKRG PNH +M        A F G  CT ES+PLV  G +NIP+L+ LPG G+ V GE+Y V  Q L  LD+ E
Sbjct:    4 IFVYGTLKRGQPNHKVMLD-HSHGLAAFRGRGCTVESFPLVIAGEHNIPWLLYLPGKGHCVTGEIYEVDEQMLRFLDDFE 82          
BLAST of CX295359 vs. ExPASy Swiss-Prot
Match: YS11_DROME (UPF0131 protein CG2811 OS=Drosophila melanogaster GN=CG2811 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.697e-12
Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 2
Query:   53 IFSYGTLKRGFPNHYLMQQLMDQNAAVFLGPYCTHESYPLVCGP-YNIPYLINLPGSGNRVKGELYSVSTQGLARLDELE 289
            +F YGTLKRG PNH+ + +  +   A FLG   T   +PLV G  YNIP+L+  PG GN ++GE+Y V    L++LD LE
Sbjct:   11 VFVYGTLKRGEPNHHWLTK-KENGQARFLGRGKTETKFPLVVGTRYNIPFLLARPGEGNHIEGEVYEVDETMLSKLDILE 89          
BLAST of CX295359 vs. ExPASy Swiss-Prot
Match: A2LDB_DANRE (AIG2-like domain-containing protein 1-B OS=Danio rerio GN=zgc:162208 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.601e-12
Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 2
Query:   44 THLIFSYGTLKRGFPNHYLMQQLMDQN--AAVFLGPYCTHESYPLVCGP-YNIPYLINLPGSGNRVKGELYSVSTQGLARLDELEGTWF----GHYERLPIRL 331
            TH +F YG+LK+G PNH+   +L++ N   A F+    T E YPLV    +NIP+L+N+PGSG +V GE+YSV  + L  LD     WF      Y+R  I+L
Sbjct:    3 THHVFVYGSLKKGQPNHH---ELLNSNNGQAEFITCAQTKEPYPLVIATKHNIPFLLNVPGSGKQVSGEIYSVDQKMLEFLD-----WFEKCPDWYQRTSIQL 97          
BLAST of CX295359 vs. ExPASy Swiss-Prot
Match: A2LD1_HUMAN (AIG2-like domain-containing protein 1 OS=Homo sapiens GN=A2LD1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 2
Query:   50 LIFSYGTLKRGFPNHYLMQQLMDQNAAVFLGPYCTHESYPLV-CGPYNIPYLINLPGSGNRVKGELYSVSTQGLARLDELE 289
            L+F YGTLKRG PNH +++     +AA F     T E YPLV  G +NIP+L++LPGSG  V+GE+Y+V  + L  LD+ E
Sbjct:    3 LVFVYGTLKRGQPNHRVLRDGAHGSAA-FRARGRTLEPYPLVIAGEHNIPWLLHLPGSGRLVEGEVYAVDERMLRFLDDFE 82          
BLAST of CX295359 vs. ExPASy Swiss-Prot
Match: A2LD1_BOVIN (AIG2-like domain-containing protein 1 OS=Bos taurus GN=A2LD1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.284e-11
Identity = 42/90 (46.67%), Postives = 54/90 (60.00%), Query Frame = 2
Query:   23 SNESKQQTHLIFSYGTLKRGFPNHYLMQQLMDQNAAVFLGPYCTHESYPLV-CGPYNIPYLINLPGSGNRVKGELYSVSTQGLARLDELE 289
            +++S  +   +F YGTLK G PNH ++       AA F G   T E YPLV  G +NIP L+NLPG G+RV GE+Y V  + L  LDE E
Sbjct:   19 TDDSSGRLAPVFVYGTLKTGQPNHRVLLDGAHGRAA-FRGRAHTLEPYPLVIAGEHNIPRLLNLPGRGHRVFGEVYEVDERMLRFLDEFE 107          
BLAST of CX295359 vs. ExPASy Swiss-Prot
Match: A2LDA_DANRE (AIG2-like domain-containing protein 1-A OS=Danio rerio GN=zgc:92115 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.895e-11
Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 2
Query:   50 LIFSYGTLKRGFPNHYLMQQLMDQN--AAVFLGPYCTHESYPLVC-GPYNIPYLINLPGSGNRVKGELYSVSTQGLARLDELEGTWFGH----YERLPIRL 331
            L+F YGTLK+G PN++   +L+D +   A F+    T E YPLV  G  NIP+L+N+PGSG RV GE+YSV  + L  LD     WF      Y+R  I+L
Sbjct:    3 LVFVYGTLKKGQPNYF---RLIDSSNGQAEFITCARTVEPYPLVITGECNIPFLLNVPGSGQRVYGEIYSVDQKMLEFLD-----WFEECPDWYQRTLIQL 95          
The following BLAST results are available for this feature:
BLAST of CX295359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
U131_ARATH3.479e-3360.78UPF0131 protein At3g02910 OS=Arabidopsis thaliana ... [more]
A2LD1_RAT1.294e-1450.00AIG2-like domain-containing protein 1 OS=Rattus no... [more]
A2LD1_MOUSE4.162e-1352.50AIG2-like domain-containing protein 1 OS=Mus muscu... [more]
YS11_DROME2.697e-1247.50UPF0131 protein CG2811 OS=Drosophila melanogaster ... [more]
A2LDB_DANRE4.601e-1243.69AIG2-like domain-containing protein 1-B OS=Danio r... [more]
A2LD1_HUMAN7.848e-1249.38AIG2-like domain-containing protein 1 OS=Homo sapi... [more]
A2LD1_BOVIN2.284e-1146.67AIG2-like domain-containing protein 1 OS=Bos tauru... [more]
A2LDA_DANRE3.895e-1145.54AIG2-like domain-containing protein 1-A OS=Danio r... [more]
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Properties
Property NameValue
Genbank descriptionC05071D05SK PhIFruit1 Citrus clementina cDNA clone C05071D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295359 ID=CX295359; Name=CX295359; organism=Citrus clementina; type=EST; length=621bp
CGAGGGTGATGATAATATTAACAGCAATGAATCGAAACAACAAACCCACT
TAATCTTCTCGTATGGCACGCTGAAAAGAGGATTCCCCAATCACTATCTA
ATGCAACAGCTGATGGATCAAAACGCCGCCGTTTTTCTGGGTCCATACTG
CACCCACGAATCGTACCCACTCGTCTGCGGGCCCTACAACATCCCTTATC
TCATCAACCTCCCGGGGTCAGGCAACCGAGTCAAGGGCGAGTTGTACTCC
GTGTCGACTCAAGGACTCGCGCGTTTGGACGAGTTGGAGGGCACCTGGTT
CGGGCACTACGAGAGGCTCCCCATTCGGCTTATTGAGGGCGGACGCGAAG
GAAATGACGGAAACGGTGCCGTTTCGGTAGCTGCCGTGGAGGCGGGAGGG
GTATTTTGCAAATAGGAGTTTCGGGGAGGGGTTGTGGGAAAAGAAAGGGA
AAGTTGGGATGAACGAGTACACTGAGTACGACGGACAAGAGTACGTGGCA
ATCGACAAGAGGGCTAAGGGTGTTTGTATTGCTGAGGAGATTGCGTCCTT
CTTGTCTTCTGATTGAAATATTGCAATTAACTCCCTTGTAATAAATTTTA
TTGTCAATAAAACCACCATTC
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