CX295402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295402 vs. ExPASy Swiss-Prot
Match: UMP8_ARATH (Uncharacterized protein At3g48680, mitochondrial OS=Arabidopsis thaliana GN=At3g48680 PE=1 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.828e-93 Identity = 165/192 (85.94%), Postives = 181/192 (94.27%), Query Frame = 2 Query: 2 LGQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEETLEIPKLAVAINDLSKSHFSEFLPYSTVYLEVEKFKKSLGITI 577 LGQW+PKVAVDAYVAPNVVLAGQVTV DG+SVW G+VLRGDLNKITVGFCSNVQERCV+HAAW+SPTGLPA+T I+R+VT+GAY LRSCTIEPECIIGQHSILMEGS+VET +ILEAGSVLPPGRRIP+GELW GNPARF+RTLT+EETLEIPKLAVAIN LS +FSEFLPYST+YLEVEKFKKSLGI I Sbjct: 65 LGQWLPKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAQTLIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVLPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSEFLPYSTIYLEVEKFKKSLGIAI 256
BLAST of CX295402 vs. ExPASy Swiss-Prot
Match: UMP7_ARATH (Uncharacterized protein At5g63510, mitochondrial OS=Arabidopsis thaliana GN=At5g63510 PE=1 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 9.073e-93 Identity = 164/192 (85.42%), Postives = 180/192 (93.75%), Query Frame = 2 Query: 2 LGQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEETLEIPKLAVAINDLSKSHFSEFLPYSTVYLEVEKFKKSLGITI 577 LGQW+PKVAVDAYVAPNVVLAGQVTV DG+SVW G+VLRGDLNKITVGFCSNVQERCV+HAAW+SPTGLPA T I+R+VT+GAY LRSCTIEPECIIGQHSILMEGS+VET +ILEAGSV+PPGRRIP+GELW GNPARF+RTLT+EETLEIPKLAVAIN LS +FSEFLPYSTVYLEVEKFKKSLGI + Sbjct: 61 LGQWLPKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAATIIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVVPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSEFLPYSTVYLEVEKFKKSLGIAV 252
BLAST of CX295402 vs. ExPASy Swiss-Prot
Match: Y2881_DICDI (Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum GN=DDB_G0288155 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.783e-25 Identity = 63/166 (37.95%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 5 GQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEETLEIPKLAVAINDLSKSH 502 G P V +++APN + G V + +S+W +VLRGD+N I +G + V +R V+H + N P G P T I V IG + + TI E IG S L +GS+VE + LEAGS+L G+ I +GE W G+PA+F+R +T ++ ++ K+ +LS+ H Sbjct: 48 GDNAPIVGQKSFIAPNASIIGDVVIGKESSIWYNAVLRGDVNSIHIGDKTVVSDRTVVHCSSNGPLG-PKPTQIGDKVYIGPGSIVHAATILGESFIGTGSTLCDGSVVEKNGFLEAGSLLTAGKTIKSGEYWGGSPAKFIRQVTKDDESQLEKIIEQNINLSEQH 212
BLAST of CX295402 vs. ExPASy Swiss-Prot
Match: Y304_METJA (Uncharacterized protein MJ0304 OS=Methanocaldococcus jannaschii GN=MJ0304 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19 Identity = 51/159 (32.08%), Postives = 88/159 (55.35%), Query Frame = 2 Query: 23 VAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEETLEIPKLAVAINDLSKS 499 ++ + +A V+ G VT+ D +SVW +V+RGD++KI +G SN+Q+ CV+H + P T I +V+IG + C IE ++G ++ ++ G+ + + I+ A +++ + IP L G P R VR LT EE I + A+ LS++ Sbjct: 2 ISKNVRIAKGAVIVGDVTIGDYSSVWYNAVIRGDVDKIIIGNYSNIQDCCVVHCSKGYP------TIIGDYVSIGHGAVIHGCRIEDNVLVGMNATILNGAKIGENCIIGANALVTQNKEIPPNSLVLGVPGRVVRELTEEEIKSIKENALRYVKLSET 154
BLAST of CX295402 vs. ExPASy Swiss-Prot
Match: YRDA_SHIFL (Protein yrdA OS=Shigella flexneri GN=yrdA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.932e-18 Identity = 48/147 (32.65%), Postives = 84/147 (57.14%), Query Frame = 2 Query: 17 PKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNS---PTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 448 P++ + + V+ G V + D +WP V+RGD++ + +G +N+Q+ +LH S P G P +I VT+G L CTI ++G SIL++G++VE ++ AGS++P +R+ +G L+ G+P + +R L+ EE Sbjct: 13 PQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPL--TIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEE 157
BLAST of CX295402 vs. ExPASy Swiss-Prot
Match: YRDA_ECOLI (Protein yrdA OS=Escherichia coli (strain K12) GN=yrdA PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.932e-18 Identity = 48/147 (32.65%), Postives = 84/147 (57.14%), Query Frame = 2 Query: 17 PKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNS---PTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 448 P++ + + V+ G V + D +WP V+RGD++ + +G +N+Q+ +LH S P G P +I VT+G L CTI ++G SIL++G++VE ++ AGS++P +R+ +G L+ G+P + +R L+ EE Sbjct: 13 PQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPL--TIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEE 157
BLAST of CX295402 vs. ExPASy Swiss-Prot
Match: YTOA_BACSU (Uncharacterized transferase ytoA OS=Bacillus subtilis GN=ytoA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 2 Query: 17 PKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEETLEIPKL 469 P + A++A N + G V + + +S+W V+RGD+ +G N+Q+ LH + N IE TIG +L S I +IG SI+++G+ + A + AGS++PPG+ IP G L G PA+ +R LT E+ ++ ++ Sbjct: 10 PDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQSPNKTL------LIEDDATIGHQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLVPPGKIIPPGHLAFGRPAKVIRPLTEEDRKDMQRI 154
BLAST of CX295402 vs. ExPASy Swiss-Prot
Match: Y3753_PSEAE (Uncharacterized protein PA3753 OS=Pseudomonas aeruginosa GN=PA3753 PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18 Identity = 45/139 (32.37%), Postives = 81/139 (58.27%), Query Frame = 2 Query: 32 DAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 448 D+++AP+ + G+V + GASVW G+VLRGD I +G SNVQ+ V+H P ++ + VT+G L C++ ++G +++++ G+ + + I+ A +++P G+ IP G L G+P + VR L+ + Sbjct: 15 DSWIAPSAAVIGKVRLDAGASVWFGAVLRGDNELIHIGEHSNVQDGSVMHTDMGYP------LTLGKGVTVGHNAMLHGCSVGDYSLVGINAVILNGAKIGKYCIIGANALIPEGKEIPDGSLVMGSPGKVVRELSEPQ 147
BLAST of CX295402 vs. ExPASy Swiss-Prot
Match: CAIE_SALA4 (Carnitine operon protein caiE OS=Salmonella agona (strain SL483) GN=caiE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14 Identity = 44/145 (30.34%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 14 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 448 +P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H ++ +T + IG L C + + ++G +S++M+G+M+ +I+ A S + G + +L G+PAR +R +T +E Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAMIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
BLAST of CX295402 vs. ExPASy Swiss-Prot
Match: CAIE_SALTY (Carnitine operon protein caiE OS=Salmonella typhimurium GN=caiE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14 Identity = 43/145 (29.66%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 14 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 448 +P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H ++ +T + IG L C + + ++G +S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148 The following BLAST results are available for this feature:
BLAST of CX295402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295402 ID=CX295402; Name=CX295402; organism=Citrus clementina; type=EST; length=716bpback to top |