CX295424

Overview
NameCX295424
Unique NameCX295424
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CML29_ORYSJ (Probable calcium-binding protein CML29 OS=Oryza sativa subsp. japonica GN=CML29 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27
Identity = 69/149 (46.31%), Postives = 98/149 (65.77%), Query Frame = 1
Query:  268 QSRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLE-MNTKDMELGSLGNLLKAAFESLN--LDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            Q++ LS + E L+++ SLVE F+AFDSDNDG +T  EL G+  S+G    E +VR+M+ + DA+ DG LS+EE L+ MN   + LG+LG LL++A  +L      D +L   EL  ++  +G   S+ DC EIIA MDGDGDGA+S E+
Sbjct:   15 QAQQLSVDFEALSYISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVRDMLARADADRDGKLSVEELLDVMNAGQLGLGALGALLQSAVPALESAAGPDGVLGADELARLLSVMGTA-SVEDCMEIIACMDGDGDGAISVEE 162          
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23
Identity = 52/147 (35.37%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  265 AQSRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            A S  L +       +  L   F+ FD + DG I+  EL  I  S+G+   EE++ + + + D   DG ++ EEF+E+NTK M+   +   LK AF   ++DG+  ++  ELHEV+ +LG   S+A+C+++I  +D DGDG + FE+
Sbjct:   20 ADSPYLQKARSGKTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDGTIDFEE 166          
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CML15_ORYSJ (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica GN=CML15 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19
Identity = 51/155 (32.90%), Postives = 90/155 (58.06%), Query Frame = 1
Query:  244 DCRS*SMAQSRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDM-ELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            D  + + A+ RP + E ET          FR FD++ DG I+ AEL+ +F SVG+  ++++V  MM++ D++ DG +SL EF  ++     +  +    L+ AF   + DG+ ++T AEL  V+  +G   ++A C+ +I  +D +GDG ++FE+
Sbjct:   38 DLAAAAAAKPRPPAAEDET-------ERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYISLGEFAAISAPPPGDAAAAEEDLRHAFGVFDADGNGVITPAELARVLRGIGEAATVAQCRRMIDGVDRNGDGLINFEE 185          
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19
Identity = 45/126 (35.71%), Postives = 79/126 (62.70%), Query Frame = 1
Query:  331 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMN-TKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            FR FD++ DG I+ +EL  +F S+G+ A+++++  MM + DA+ DG +SL+EF  +N T   +  ++   L+ AF   + DG+  ++ AEL  V+  LG   ++  C+ +I  +D +GDG +SFE+
Sbjct:   45 FRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIEGVDQNGDGLISFEE 170          
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18
Identity = 46/128 (35.94%), Postives = 77/128 (60.16%), Query Frame = 1
Query:  331 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEF---LEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            F  FD++ DG I+G EL+G+  ++G   S+E++  +M + D + DG ++++EF   ++  T         N LK AFE  + D + +++  ELH+++  LG   +  DC E+I S+D DGDG VSFE+
Sbjct:   25 FNRFDANGDGKISGDELAGVLKALGSNTSKEEIGRIMEEIDTDKDGFINVQEFAAFVKAETDPYPSSGGENELKEAFELYDQDHNGLISSVELHKILTRLGERYAEHDCVEMIKSVDSDGDGYVSFEE 152          
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: POLC2_JUNOX (Polcalcin Jun o 2 OS=Juniperus oxycedrus PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18
Identity = 48/132 (36.36%), Postives = 82/132 (62.12%), Query Frame = 1
Query:  310 VLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            V  L E F+ FD++ DG I+G+EL+ I  S+G    E +V+ MM + DA+ DG +SL+EF+++N K    G+    LK AF+  + D +  ++ AEL   +E++G   ++ + + II ++D +GDG +S E+
Sbjct:   24 VHELEEVFKKFDANGDGKISGSELADILRSLGSDVGEAEVKAMMEEADADGDGYVSLQEFVDLNNK----GASVKDLKNAFKVFDRDCNGSISAAELCHTLESVGEPCTIEESKNIIHNVDKNGDGLISVEE 151          
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18
Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T   +    E F  FD D DG+IT  EL  +  S+G   +E ++++M+ + DA+ DG +   EFL M  + M+       ++ AF   + DGD  ++ AEL  V+ NLG  L+  +  E+I   D DGDG V++E+
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141          
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18
Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  298 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            T   +    E F  FD D DG+IT  EL  +  S+G   +E ++++M+ + DA+ DG +   EFL M  + M+       ++ AF   + DGD  ++ AEL  V+ NLG  L+  +  E+I   D DGDG V++E+
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141          
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CALM_STRIE (Calmodulin OS=Strongylocentrotus intermedius PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18
Identity = 47/148 (31.76%), Postives = 80/148 (54.05%), Query Frame = 1
Query:  262 MAQSRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            M+Q   ++ +  T   +    E F  FD D DG+IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL M  + M+       ++ AF   + DG+  ++ AEL  V+ NLG  L+  +  E+I   D DGDG V++E+
Sbjct:    1 MSQELTINADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 148          
BLAST of CX295424 vs. ExPASy Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17
Identity = 46/137 (33.58%), Postives = 80/137 (58.39%), Query Frame = 1
Query:  301 LNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNL--LKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSFED 705
            L  +  + + F+ FD +NDG I+  EL  +  ++   AS+E+ + MM++ D + +G + L+EF+ +     +  +   +  LK AF+  +LD +  ++  ELH V++NLG   S+ DCQ +I  +D DGDG V FE+
Sbjct:   10 LGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMINKVDSDGDGCVDFEE 146          
The following BLAST results are available for this feature:
BLAST of CX295424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
CML29_ORYSJ1.010e-2746.31Probable calcium-binding protein CML29 OS=Oryza sa... [more]
CML25_ARATH9.780e-2335.37Probable calcium-binding protein CML25 OS=Arabidop... [more]
CML15_ORYSJ5.023e-1932.90Probable calcium-binding protein CML15 OS=Oryza sa... [more]
CML10_ORYSJ5.023e-1935.71Probable calcium-binding protein CML10 OS=Oryza sa... [more]
ALL8_OLEEU2.493e-1835.94Calcium-binding allergen Ole e 8 OS=Olea europaea ... [more]
POLC2_JUNOX5.553e-1836.36Polcalcin Jun o 2 OS=Juniperus oxycedrus PE=1 SV=2[more]
CALM_RENRE5.553e-1834.56Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_PATSP5.553e-1834.56Calmodulin OS=Patinopecten sp. PE=1 SV=2[more]
CALM_STRIE9.472e-1831.76Calmodulin OS=Strongylocentrotus intermedius PE=2 ... [more]
CML23_ARATH2.110e-1733.58Probable calcium-binding protein CML23 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC05072A11SK PhIFruit1 Citrus clementina cDNA clone C05072A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295424 ID=CX295424; Name=CX295424; organism=Citrus clementina; type=EST; length=706bp
GAGGAAAGGGCCGGGTAGTGTGATAGAGTCGCGATCGGGATAATCTTTTG
GGTGCAACTTTGAGGATAAGGATAATAATTGCAAGCATAAGAATCGACGT
CTACTTTAATTATTCTACTTTAATTTTTGTCGACTCAAAGGAACAACAAA
AGAATAATGGCCGCCCCCTCATCTCCACTATTTATACATAGAATGAACCA
AATCCTAACAAAAGTGACGTTGTGCATTAATATTAGTTGTTGTGATTGCA
GAAGTTGATCCATGGCTCAATCCAGGCCTCTCTCCGAGGAAACCGAGACA
TTGAACCATGTCTTAAGTCTAGTGGAGACTTTCAGAGCCTTTGATTCGGA
CAACGATGGGTCGATCACTGGTGCTGAGCTCTCTGGAATATTCAATTCAG
TTGGTTACAGGGCTAGCGAGGAAGATGTCAGGGAAATGATGCGGCAAGGT
GACGCGAACAACGACGGATTGCTGAGCTTGGAGGAGTTCTTGGAGATGAA
CACCAAAGACATGGAGCTTGGAAGCCTTGGGAATTTGCTCAAGGCAGCTT
TTGAATCTCTGAATCTTGATGGTGATGATATCTTAACTGGAGCAGAGCTG
CATGAAGTTATTGAAAATTTAGGAGTTGGGTTGTCATTAGCTGATTGCCA
GGAGATTATTGCTTCCATGGATGGAGACGGTGATGGTGCTGTTAGCTTTG
AGGACC
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