CX295447

Overview
NameCX295447
Unique NameCX295447
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length565
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX295447_ssr503 microsatellite CX295447_ssr503:503..516. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC1_DROME (Phosphatidylinositide phosphatase SAC1 OS=Drosophila melanogaster GN=Sac1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.903e-20
Identity = 57/152 (37.50%), Postives = 85/152 (55.92%), Query Frame = 3
Query:   48 FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGHYTVNRNS----PSPFQ-LNGFESFSYLPVASALVIGGLTLTSFSLQQGRSAQQYLSSVVWAGVTAGVLALVKANGTQFCSRPRL 488
            F+ +WA+  D +S++Y+GT ALK D  R GK+T SG ++DG +SL RYYLNNF DG RQD++DL  G Y VN N     PSP +  +G+  F++  V   LV   + + + +     + +  L  + W  + A     +   G +F   PRL
Sbjct:  434 FKGVWADNADLVSLQYSGTCALKTDFTRTGKRTKSGAMQDGKNSLMRYYLNNFADGQRQDSIDLFLGKYLVNDNEGGAVPSPLESKHGWRFFTFPSV--LLVAVAMFMITMTYPAEFNTENLLFMLFWGAMIAVSATGILHYGVEFVQWPRL 583          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC1_RAT (Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus GN=Sacm1l PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.339e-19
Identity = 58/155 (37.42%), Postives = 87/155 (56.13%), Query Frame = 3
Query:   33 EEYGK-FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGHYTVNR-NSPSPFQLNGFESFSYLPVASALVIGGLTLTSFSLQQGRSAQQYLSSVVWAGVTA-GVLALVKANGTQFCSRPRL 488
            +E+ K ++  WA+  +  + +YAGT ALK D  R GK+T  GL+ DG +SL RYY NNF DG RQD++DL  G+Y+V+  +S SP  +     F  LP+   +V+         L  G +  + L+ V++ GV + G   ++  NG  F   PRL
Sbjct:  428 DEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLVMDGFNSLLRYYKNNFSDGFRQDSIDLFLGNYSVDELDSHSPLSVPRDWKFLALPI--IMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRL 580          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC1_BOVIN (Phosphatidylinositide phosphatase SAC1 OS=Bos taurus GN=SACM1L PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.220e-18
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 3
Query:   33 EEYGK-FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGHYTVNR-NSPSPFQLNGFESFSYLPVASALVIGGLTLTSFSLQQGRSAQQYLSSVVWAGVTA-GVLALVKANGTQFCSRPRL 488
            +E+ K ++  WA+  +  + +YAGT ALK D  R GK+T  GLI DG +SL RYY NNF DG RQD++DL  G+Y+V+   S SP  +     F  LP+   +V+         L  G +  + L+ V++ GV + G   ++  NG  F   PRL
Sbjct:  428 DEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLIMDGWNSLIRYYKNNFSDGFRQDSIDLFLGNYSVDELESHSPLSVPRDLKFLALPI--IMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRL 580          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC1_MOUSE (Phosphatidylinositide phosphatase SAC1 OS=Mus musculus GN=Sacm1l PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.593e-18
Identity = 58/155 (37.42%), Postives = 86/155 (55.48%), Query Frame = 3
Query:   33 EEYGK-FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGHYTVNR-NSPSPFQLNGFESFSYLPVASALVIGGLTLTSFSLQQGRSAQQYLSSVVWAGVTA-GVLALVKANGTQFCSRPRL 488
            +E+ K ++  WA+  +  + +YAGT ALK D  R GK+T  GL+ DG +SL RYY NNF DG RQD++DL  G+Y+V+   S SP  +     F  LP+   +V+         L  G +  + L+ V++ GV + G   ++  NG  F   PRL
Sbjct:  428 DEFEKTYKNAWADNANACAKQYAGTGALKTDFTRTGKRTQLGLLMDGFNSLLRYYKNNFSDGFRQDSIDLFLGNYSVDELESHSPLSVPRDWKFLALPI--IMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRL 580          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC1_PONAB (Phosphatidylinositide phosphatase SAC1 OS=Pongo abelii GN=SACM1L PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.081e-18
Identity = 58/155 (37.42%), Postives = 86/155 (55.48%), Query Frame = 3
Query:   33 EEYGK-FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGHYTVNR-NSPSPFQLNGFESFSYLPVASALVIGGLTLTSFSLQQGRSAQQYLSSVVWAGVTA-GVLALVKANGTQFCSRPRL 488
            +E+ K ++  WA+  +  + +YAGT ALK D  R GK+T  GLI DG +S+ RYY NNF DG RQD++DL  G+Y+V+   S SP  +     F  LP+   +V+         L  G +  + L+ V++ GV + G   ++  NG  F   PRL
Sbjct:  428 DEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTHLGLIMDGWNSMIRYYKNNFSDGFRQDSIDLFLGNYSVDELESHSPLSVPRDWKFLALPI--IMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRL 580          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC1_HUMAN (Phosphatidylinositide phosphatase SAC1 OS=Homo sapiens GN=SACM1L PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.081e-18
Identity = 58/155 (37.42%), Postives = 86/155 (55.48%), Query Frame = 3
Query:   33 EEYGK-FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGHYTVNR-NSPSPFQLNGFESFSYLPVASALVIGGLTLTSFSLQQGRSAQQYLSSVVWAGVTA-GVLALVKANGTQFCSRPRL 488
            +E+ K ++  WA+  +  + +YAGT ALK D  R GK+T  GLI DG +S+ RYY NNF DG RQD++DL  G+Y+V+   S SP  +     F  LP+   +V+         L  G +  + L+ V++ GV + G   ++  NG  F   PRL
Sbjct:  428 DEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTHLGLIMDGWNSMIRYYKNNFSDGFRQDSIDLFLGNYSVDELESHSPLSVPRDWKFLALPI--IMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDAPRL 580          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC1_XENLA (Phosphatidylinositide phosphatase SAC1 OS=Xenopus laevis GN=sacm1l PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.717e-18
Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 3
Query:   48 FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGHYTVNR-NSPSPFQLNGFESFSYLPVASALVIGGLTLTSFSLQQGRSAQQYLSSVV-WAGVTAGVLALVKANGTQFCSRPRL 488
            ++  WA+  +  + +YAGT ALK D  R GK+T  GL+ DG +SL RYY NNF DG RQD++DL  G+Y+V    S SP  +     F  LP+   +V+         L  G +  + L+ V+ W   + G  A++  NG  F   P+L
Sbjct:  433 YKNAWADNANACAKQYAGTGALKTDFTRTGKRTQWGLLMDGWNSLIRYYKNNFSDGFRQDSIDLFLGNYSVEEAYSTSPLHIQTDWKFLALPI--IMVVAFSMCIICLLMAGDTWTETLAYVLFWGTASIGTGAIIMYNGKDFVDAPKL 579          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC1B_DANRE (Phosphatidylinositide phosphatase SAC1-B OS=Danio rerio GN=sacm1lb PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 4.635e-18
Identity = 54/149 (36.24%), Postives = 83/149 (55.70%), Query Frame = 3
Query:   48 FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGHYTVNR-NSPSPFQLNGFESFSYLPVASALVIGGLTLTSFSLQQGRSAQQYLSSVV-WAGVTAGVLALVKANGTQFCSRPRL 488
            ++  WA+  +  + +YAGT ALK D  R GK+T  GL+ DG +S+ RYY NNF DG RQD++DL  G+Y+V+  +S +P  +     F  LPV   +V+         L  G +  + L+ V+ W   +A   A++  NG +F   P+L
Sbjct:  433 YKNAWADNANACAKQYAGTGALKTDFTRTGKRTHWGLVMDGWNSMIRYYKNNFSDGFRQDSIDLFLGNYSVDETDSLTPLHVKKDWKFLLLPV--IMVVAFSMCIICLLMAGDTWTETLAYVLFWGMASALTAAVIVVNGREFVDAPKL 579          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC1A_DANRE (Phosphatidylinositide phosphatase SAC1-A OS=Danio rerio GN=sacm1la PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.543e-16
Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 3
Query:   48 FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGHYTV---NRNSPSPFQLNGFESFSYLPVASALVIGGLTLTSFSLQQGRSAQQYLSSVVWAG----VTAGVLALVKANGTQFCSRPRL 488
            ++  WA+  +  + +YAGT ALK D  R GK+T  GL+ DG +S+ RYY NNF DG RQD++DL  G+Y V   + N+P    L+  + + +L +   +V+         L  G +  + L+ V++ G    VT GV+     NG  F   PRL
Sbjct:  433 YKNAWADNANACAKQYAGTGALKTDFTRTGKRTQWGLLMDGWNSMIRYYKNNFSDGFRQDSIDLFLGNYAVEEADMNTP----LHEPKDWKFLTLPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGSASVVTGGVILF---NGRDFVDAPRL 579          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC2_DANRE (Phosphatidylinositide phosphatase SAC2 OS=Danio rerio GN=inpp5f PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.153e-15
Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 3
Query:   39 YGKFRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGH 251
            Y  ++ +WA  GD IS +YAGT ALKGD  R G++ ++G+++DG++S +RYYLN F+D  RQ  +DL+ GH
Sbjct:  498 YRIYQVMWANNGDTISRQYAGTAALKGDFTRTGERKLAGVMKDGVNSANRYYLNRFRDAYRQAVIDLMMGH 568          
The following BLAST results are available for this feature:
BLAST of CX295447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
SAC1_DROME2.903e-2037.50Phosphatidylinositide phosphatase SAC1 OS=Drosophi... [more]
SAC1_RAT9.339e-1937.42Phosphatidylinositide phosphatase SAC1 OS=Rattus n... [more]
SAC1_BOVIN1.220e-1838.06Phosphatidylinositide phosphatase SAC1 OS=Bos taur... [more]
SAC1_MOUSE1.593e-1837.42Phosphatidylinositide phosphatase SAC1 OS=Mus musc... [more]
SAC1_PONAB2.081e-1837.42Phosphatidylinositide phosphatase SAC1 OS=Pongo ab... [more]
SAC1_HUMAN2.081e-1837.42Phosphatidylinositide phosphatase SAC1 OS=Homo sap... [more]
SAC1_XENLA2.717e-1836.91Phosphatidylinositide phosphatase SAC1 OS=Xenopus ... [more]
SAC1B_DANRE4.635e-1836.24Phosphatidylinositide phosphatase SAC1-B OS=Danio ... [more]
SAC1A_DANRE2.543e-1635.71Phosphatidylinositide phosphatase SAC1-A OS=Danio ... [more]
SAC2_DANRE2.153e-1549.30Phosphatidylinositide phosphatase SAC2 OS=Danio re... [more]

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Properties
Property NameValue
Genbank descriptionC05072C10SK PhIFruit1 Citrus clementina cDNA clone C05072C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295447 ID=CX295447; Name=CX295447; organism=Citrus clementina; type=EST; length=565bp
GAGGCTTCCCCAAGTGCATTTCTATGTTCAGTGAGGAATATGGAAAATTC
AGAACGTTGTGGGCTGAGCAAGGCGACGAGATTAGCATCGAATATGCTGG
AACATATGCCCTGAAAGGAGACCTTGTTAGATACGGGAAGCAGACAATAT
CTGGATTGATCAGAGATGGGATGAGTTCTCTTTCAAGATACTATTTGAAC
AATTTCCAGGACGGAGTTCGACAGGATGCAATGGATCTCATAAGTGGTCA
CTATACTGTCAACAGAAACAGTCCCTCTCCATTTCAGCTCAATGGGTTCG
AATCATTCTCGTATCTCCCTGTGGCATCAGCATTGGTAATTGGAGGTTTG
ACACTGACTTCCTTCTCACTTCAACAAGGGAGAAGTGCTCAGCAATATCT
CTCTTCTGTGGTCTGGGCTGGAGTCACCGCTGGAGTACTGGCGCTGGTAA
AAGCTAACGGTACACAATTCTGTTCAAGGCCTCGTCTGTGCGGCCTTCGC
TAATATATATATATATTTTTAATCATTACGCGATTGTTATTATCTTTTCG
AGAAACAAAACTTGT
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