CX295474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 7.935e-61 Identity = 116/136 (85.29%), Postives = 126/136 (92.65%), Query Frame = -1 Query: 238 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPILGEE 645 KIDAWFGSRKTSAAIRTALSHV NLITGVTKG+RYKMRFVYA FPINASI N+NK+IEIRNF GEKKVRKVD+LDGV++IRS+KVKDE+VLDGNDIELVSR ALINQKCHVK KDIRKFLDGIYVSEK ++ EE Sbjct: 58 KIDAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGAVVVEE 193
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=2 SV=3) HSP 1 Score: 233.032 bits (593), Expect = 1.036e-60 Identity = 113/136 (83.09%), Postives = 127/136 (93.38%), Query Frame = -1 Query: 238 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPILGEE 645 KID+WFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASIG + K+IEIRNF GEKKVRKV+MLDGVT++RS+KVKDE+VLDGNDIELVSR ALINQKCHVK KDIRKFLDGIYVSEKS I+ EE Sbjct: 59 KIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEEE 194
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3) HSP 1 Score: 231.876 bits (590), Expect = 2.309e-60 Identity = 113/132 (85.61%), Postives = 124/132 (93.94%), Query Frame = -1 Query: 250 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPI 645 ++DAWFG+R+T AAIRTA+SHV NLITGVTKGYRYKMRFVYAHFPINASI N+N AIEIRNF GEKKVRKVDML+GVT++RS+KVKDELVLDGNDIELVSR AALINQKCHVKNKDIRKFLDGIYVS+K I Sbjct: 55 QVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTI 186
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.655e-58 Identity = 110/138 (79.71%), Postives = 123/138 (89.13%), Query Frame = -1 Query: 238 QAKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPILGEE 651 Q KID+WFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI NNK+IEIRNF GEKKVRKV+MLDGV ++RS+KVKDE++L+GNDIELVSR ALINQKCHVK KDIRKFLDGIYVSEK I EE Sbjct: 57 QLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGKIAVEE 194
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_SPOFR (60S ribosomal protein L9 OS=Spodoptera frugiperda GN=RpL9 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.407e-41 Identity = 83/136 (61.03%), Postives = 101/136 (74.26%), Query Frame = -1 Query: 238 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPILGEE 645 K++ WFGS+K AA+RT SHV N+I GVTKG++YKMR VYAHFPIN N IEIRNF GEK +R+V M GVTV+ S K KDEL+++GN +E VS AALI Q VKNKDIRKFLDG+YVSEK+ + +E Sbjct: 54 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVEVDE 189
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_DROME (60S ribosomal protein L9 OS=Drosophila melanogaster GN=RpL9 PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.407e-41 Identity = 81/133 (60.90%), Postives = 101/133 (75.94%), Query Frame = -1 Query: 247 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPIL 645 K++ WFG++K AA+RT SH+ N+I GVT G++YKMR VYAHFPIN NN IEIRNF GEK +R+V+M GVTV+ S KDEL+++GNDIE VS AALI Q VKNKDIRKFLDG+YVSEK+ ++ Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_DICDI (60S ribosomal protein L9 OS=Dictyostelium discoideum GN=rpl9 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.556e-40 Identity = 75/129 (58.14%), Postives = 101/129 (78.29%), Query Frame = -1 Query: 256 IDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKS 642 +D WFG+RK A I+T S + N+ITGVTKGY YKMRFVYAHFPIN ++ + + +EIRNFFGEK VR++++LDG+T R++K KDE+VL GN +EL+S+ A I + +K KD+RKFLDGIYVSE++ Sbjct: 55 VDLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERN 183
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_MACFA (60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.722e-40 Identity = 83/132 (62.88%), Postives = 95/132 (71.97%), Query Frame = -1 Query: 250 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPI 645 ++D W+G+RK A IRT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF GEK +R+V M GV S KDEL+L+GNDIELVS AALI Q VKNKDIRKFLDGIYVSEK + Sbjct: 56 RVDKWWGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_RAT (60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.009e-39 Identity = 82/132 (62.12%), Postives = 95/132 (71.97%), Query Frame = -1 Query: 250 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPI 645 ++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF GEK +R+V M GV S KDEL+L+GNDIELVS AALI Q VKNKDIRKFLDGIYVSEK + Sbjct: 56 RVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_MOUSE (60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.009e-39 Identity = 82/132 (62.12%), Postives = 95/132 (71.97%), Query Frame = -1 Query: 250 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPI 645 ++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF GEK +R+V M GV S KDEL+L+GNDIELVS AALI Q VKNKDIRKFLDGIYVSEK + Sbjct: 56 RVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187 The following BLAST results are available for this feature:
BLAST of CX295474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295474 ID=CX295474; Name=CX295474; organism=Citrus clementina; type=EST; length=660bpback to top |