CX295481

Overview
NameCX295481
Unique NameCX295481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295481 vs. ExPASy Swiss-Prot
Match: DCNL5_HUMAN (DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 2 
Query:    2 RKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEWMKAKQT 259
            ++S+DI++   +L L+LG  +        +YL+ QS Y+V+N DQW     F   +   D +NYD + AWP++LD FVEW K +QT
Sbjct:  154 QRSLDIDTAKSMLALLLGRTWPL-FSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH-ADLSNYDEDGAWPVLLDEFVEWQKVRQT 236
[Close]
BLAST of CX295481 vs. ExPASy Swiss-Prot
Match: DCNL4_MOUSE (DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.927e-11
Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 2 
Query:    2 RKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPLVLDNFVEWMKAKQ 256
            ++S+DI +   +LGL+LG  +        ++L+ QS YKVIN DQW     F   IS  D +NYD + AWP++LD FVEW K KQ
Sbjct:  209 QRSLDINTAKCMLGLLLGKIWPL-FPVFHQFLE-QSKYKVINKDQWCNVLEFSRTISL-DLSNYDEDGAWPVLLDEFVEWYKDKQ 290
The following BLAST results are available for this feature:
BLAST of CX295481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DCNL5_HUMAN9.927e-1139.53DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=... [more]
DCNL4_MOUSE9.927e-1144.71DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=... [more]
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Properties
Property NameValue
Genbank descriptionC05072F08SK PhIFruit1 Citrus clementina cDNA clone C05072F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295481 ID=CX295481; Name=CX295481; organism=Citrus clementina; type=EST; length=582bp
GAGGAAGAGTGTAGACATAGAGAGTGTCTGCGAATTACTGGGTCTTGTAT
TAGGATCCCAATACCGTGCCCAGGTTGACTATTTGATTGAGTATCTAAAG
ATTCAATCTGATTATAAGGTAATTAACATGGATCAGTGGATGGGGTTTTA
CCGGTTCTGCAATGAGATAAGCTTCCCGGACTTCAATAATTACGATCCAA
ATCTTGCTTGGCCCTTGGTCCTGGACAATTTTGTAGAATGGATGAAAGCG
AAGCAGACATAAACTCTGGTTCTTTTAACCGACCTGATTCCCAGCTGTAA
ACTGCCATTTTTACATAAGACTATTGAAAGTACACAAACCAACCCTGCTC
GAGCATATTTTTCTTTTTCCAATTCAAATTTTGTATTTATCAACTCTCCG
AGCGCAAAGCACATCCTCAAATGCATCAGCCTCTAAATTATATGATGAGC
ATATGCCTTGTAACAGTCTCGATGCTTTTTTCCCCTGTTGCCCTTGCTTC
TTTAATCATCAATGCTGTGAAATACTTTTGACCATATAATTGCAGTGGTG
ATTAATGTTTGTTAAAAAAAAAAAAAAAAAAA
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