CX295496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.528e-51 Identity = 99/164 (60.37%), Postives = 116/164 (70.73%), Query Frame = 3 Query: 33 SDYC--DPNYPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 512 +DYC DPNYPC GK Y+GRGP+QLTWNYNY +CG +G DLLNNPDLLAT+ +SFKSA WFWMT Q PKPSCH+VII W PS +D AGR+PG+GL TNIINGG+ECG G N V +RIGF+ +C G+ G+NLDC NQR Y SM Sbjct: 164 ADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIG--VDLLNNPDLLATDP----TISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSVDSM 321
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.606e-51 Identity = 96/157 (61.15%), Postives = 117/157 (74.52%), Query Frame = 3 Query: 30 SSDYC--DPNYPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 488 SS+YC P YPC GK YYGRGP+QL+WNYNY CGE L +LL NPDL+AT+ RVLSFK+A+WFWMT Q PKPSCH+V+ W+PSA D AGRLPGYG+ TN++NGG+ECG G N V +R+GFF +CG G+ G+NLDC NQRP+G Sbjct: 93 SSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALR--VNLLGNPDLVATD----RVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 7.584e-51 Identity = 96/171 (56.14%), Postives = 122/171 (71.35%), Query Frame = 3 Query: 12 REVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 512 RE G+ DYC P+ +PC KY+GRGPIQ++ NYNY CG +G DLLNNPDL+AT+ V+SFKSAIWFWMT Q PKPSCH+VI W+PS D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ +M Sbjct: 155 REQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDS----VISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 199.904 bits (507), Expect = 9.905e-51 Identity = 93/156 (59.62%), Postives = 116/156 (74.36%), Query Frame = 3 Query: 30 SSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 485 +SDYC+P+ +PC +YYGRGP+QL+WNYNY CG +G DLLNNPDL+A + V++FK+AIWFWMTAQPPKPSCH VI +W+PS D AGRLPGYG+ TNIINGG+ECG G + V +RIGF+ +C FG+ PG NLDC NQR + Sbjct: 177 ASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIG--VDLLNNPDLVAND----AVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSF 326
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 9.905e-51 Identity = 97/171 (56.73%), Postives = 122/171 (71.35%), Query Frame = 3 Query: 12 REVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 512 RE G+ DYC P+ +PC KY+GRGPIQ++ NYNY CG +G DLLNNPDL+AT+ V+SFKSA+WFWMT Q PKPSCH+VII W+PSA D A RLPG+G+ TNIINGG+ECG G + V++RIGF+ +C G+ PGDNLDC NQR +G L+ +M Sbjct: 166 REQGSPG-DYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDP----VISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 9.905e-51 Identity = 99/171 (57.89%), Postives = 121/171 (70.76%), Query Frame = 3 Query: 12 REVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 512 RE+ SS YC DPNYPC GK Y+GRGP+QL+WNYNY +CG +G DLLNNPDLL+++ +SFKSA WFWMT Q PKPSCH VII W PS++D AGR+PGYG+ TNIINGG+ECG G N V +RIGF+ +C G+ G+NLDC NQ P+G + SM Sbjct: 161 RELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIG--VDLLNNPDLLSSDP----TISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.294e-50 Identity = 94/171 (54.97%), Postives = 122/171 (71.35%), Query Frame = 3 Query: 12 REVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 512 RE G+ DYC P+ +PC KY+GRGPIQ++ NYNY CG +G DLLNNPDL+AT+ ++SFKSAIWFWMT Q PKPSCH+VI W+PS D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ ++ Sbjct: 153 REQGSPG-DYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDS----IISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 316
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.689e-50 Identity = 95/171 (55.56%), Postives = 122/171 (71.35%), Query Frame = 3 Query: 12 REVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 512 RE G+ DYC P+ +PC KY+GRGPIQ++ NYNY CG +G DLLNNPDL+AT+ V+SFKSAIWFWMT Q PKPSCH+VI W+PS D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ ++ Sbjct: 155 REQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDS----VISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 318
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.764e-50 Identity = 96/171 (56.14%), Postives = 122/171 (71.35%), Query Frame = 3 Query: 12 REVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 512 RE G+ DYC P+ +PC KY+GRGPIQ++ NYNY CG +G DLLNNPDL+AT+ V+SFKSA+WFWMT Q PKPSCH+VII W+PS+ D A RLPG+G+ TNIINGG+ECG G + V++RIGF+ +C G+ PGDNLDC NQR +G L+ +M Sbjct: 161 REQGSPG-DYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDP----VISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324
BLAST of CX295496 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 4.916e-50 Identity = 95/171 (55.56%), Postives = 121/171 (70.76%), Query Frame = 3 Query: 12 REVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 512 RE G+ DYC P+ +PC KY+GRGPIQ++ NYNY CG +G DLLNNPDL+AT+ V+SFKSAIWFWMT Q PKPSCH+VI W+PS D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PG+NLDC NQR +G L+ M Sbjct: 159 REQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDP----VISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322 The following BLAST results are available for this feature:
BLAST of CX295496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295496 ID=CX295496; Name=CX295496; organism=Citrus clementina; type=EST; length=670bpback to top |