CX295505

Overview
NameCX295505
Unique NameCX295505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length601
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295505 vs. ExPASy Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.320e-13
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = -1
Query:  191 CNGKSSWPELVGVNGEIAAATIQKENPNVHAIIILEGTPVTQDFRCXXXXXXXXXXXXXXXVPRIG 388
            C GKSSWP LVGV G +A A I+++NPNV A+I+ EGTPVT+DFRC                PRIG
Sbjct:    3 CPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG 68          
BLAST of CX295505 vs. ExPASy Swiss-Prot
Match: ICI_LINUS (Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.273e-11
Identity = 28/46 (60.87%), Postives = 40/46 (86.96%), Query Frame = -1
Query:  251 CNGKSSWPELVGVNGEIAAATIQKENPNVHAIIILEGTPVTQDFRC 388
            C GK++WPELVG +G +AAAT+++EN NVHAI++ EG+ +T+DFRC
Sbjct:    4 CPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRC 49          
The following BLAST results are available for this feature:
BLAST of CX295505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ITH5_CUCMA2.320e-1353.03Inhibitor of trypsin and hageman factor OS=Cucurbi... [more]
ICI_LINUS1.273e-1160.87Proteinase inhibitor OS=Linum usitatissimum PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionC05072H08SK PhIFruit1 Citrus clementina cDNA clone C05072H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295505 ID=CX295505; Name=CX295505; organism=Citrus clementina; type=EST; length=601bp
CATAAAGGTTGTATTATTACACTCATTCGTAGAACCCGATTGTTGGATAT
CACGCACATCCATGCATGCTTTATTAAACAACACTACTTGTTCATTTATT
TTACTAATACATAGTTAAGTGATTATAAACAAGCAGTTAATCCTGACCAT
CCATCCAGCCATGATGATTGCAGATAATCGTCGAAGTTCAGCCAATCCGA
GGAACTTGAACCACCTTCTCATATTTGTCAACCACAACTCGAACCCGATC
ACAACGAAAATCTTGTGTAACTGGAGTTCCCTCAAGTATTATGATTGCAT
GAACATTAGGATTCTCTTTCTGTATCGTAGCAGCAGCAATCTCCCCGTTT
ACACCAACCAGTTCTGGCCATGAGCTCTTGCCATTACACTCAAATTGAGT
TACGATATCGCAATTGCTGGTAGCCATGAGGAGCTCCTGGCCATCCGAAT
GAAGCACTAACGGCTCATGACGAGCAGCCAAAGATGGTTTTGCAGCAAAG
GCAAAGAGAAAGACGAAGAAAGCTAGTGCTAGTACTGTGTTCTTCATTGT
TGATTAATTTTCAATTATTTTGAAGGCTGGAGAGAGGCGAGAGAGAACTA
G
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