CX295512

Overview
NameCX295512
Unique NameCX295512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11402 contig Ccv1_Contig11402:274..980. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB1_TOBAC (Guanine nucleotide-binding protein subunit beta-1 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 3.074e-101
Identity = 174/195 (89.23%), Postives = 183/195 (93.85%), Query Frame = 3
Query:  117 ELKERHAAAIETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGDF 701
            ELKERH AA +TVN LRE+LKQKR QLLD DV+GY+RSQG+ PV+FGPTDLVCCR LQGH GKVYSLDWT E+NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP+GQSVACGGLDSVCSIFNLNSP DKDGN PVSRMLSGHKGYVS CQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG+F
Sbjct:    5 ELKERHMAATQTVNDLREKLKQKRLQLLDTDVSGYARSQGKTPVTFGPTDLVCCRILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGQSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEF 199          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB_NICPL (Guanine nucleotide-binding protein subunit beta OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.168e-100
Identity = 173/195 (88.72%), Postives = 182/195 (93.33%), Query Frame = 3
Query:  117 ELKERHAAAIETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGDF 701
            ELKERH AA +TVN LRE+LKQKR QLLD DV+GY+RSQG+ PV+FGPTDLVCCR LQGH GKVYSLDWT E+NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP+G SVACGGLDSVCSIFNLNSP DKDGN PVSRMLSGHKGYVS CQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG+F
Sbjct:    5 ELKERHMAATQTVNDLREKLKQKRLQLLDTDVSGYARSQGKTPVTFGPTDLVCCRILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGHSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEF 199          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB2_TOBAC (Guanine nucleotide-binding protein subunit beta-2 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.526e-100
Identity = 173/195 (88.72%), Postives = 182/195 (93.33%), Query Frame = 3
Query:  117 ELKERHAAAIETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGDF 701
            ELKERH AA +TVN LRE+LKQKR QLLD DV+GY+RSQG+ PV FGPTDLVCCR LQGH GKVYSLDWT E+NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP+GQSVACGGLDSVCSIFNLNSP DKDGN PVSRMLSGHKGYVS CQYVPDEDTH+ITSSGDQTCVLWDITTGLRTSVFGG+F
Sbjct:    5 ELKERHMAATQTVNDLREKLKQKRLQLLDTDVSGYARSQGKTPVIFGPTDLVCCRILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGQSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHVITSSGDQTCVLWDITTGLRTSVFGGEF 199          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB3_TOBAC (Guanine nucleotide-binding protein subunit beta OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 2.602e-100
Identity = 172/195 (88.21%), Postives = 183/195 (93.85%), Query Frame = 3
Query:  117 ELKERHAAAIETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGDF 701
            ELKERH AA +TV+ LRE+LKQKR QLLD DV+GY+RSQG+ PV+FGPTDLVCCR LQGH GKVYSLDWT E+NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP+GQSVACGGLDSVCSI+NLNSP DKDGN PVSRMLSGHKGYVS CQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG+F
Sbjct:    5 ELKERHMAATQTVSDLREKLKQKRLQLLDTDVSGYARSQGKTPVTFGPTDLVCCRILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGQSVACGGLDSVCSIYNLNSPIDKDGNHPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEF 199          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB_SOLTU (Guanine nucleotide-binding protein subunit beta OS=Solanum tuberosum GN=GB1 PE=2 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 6.409e-99
Identity = 170/195 (87.18%), Postives = 181/195 (92.82%), Query Frame = 3
Query:  117 ELKERHAAAIETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGDF 701
            ELKERH AA +TVN LRE+LKQKR QLLD DV+GY++ QG++PV+FGPTDLVCCR LQGH GKVYSLDWT E+NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP+GQSVACGGLDS CSIFNLNSP DKDG  PVSRMLSGHKGYVS CQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG+F
Sbjct:    5 ELKERHMAATQTVNDLREKLKQKRLQLLDTDVSGYAKRQGKSPVTFGPTDLVCCRILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPSGQSVACGGLDSACSIFNLNSPIDKDGIHPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEF 199          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB_ARATH (Guanine nucleotide-binding protein subunit beta OS=Arabidopsis thaliana GN=GB1 PE=1 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 1.478e-95
Identity = 163/195 (83.59%), Postives = 179/195 (91.79%), Query Frame = 3
Query:  117 ELKERHAAAIETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGDF 701
            ELKERHA A ETVN+LR++L+Q+R QLLD DVA YS +QGR  VSFG TDLVCCRTLQGH GKVYSLDWT ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP GQSVACGGLDSVCSIF+L+S  DKDG +PVSRML+GH+GYVSCCQYVP+ED HLITSSGDQTC+LWD+TTGL+TSVFGG+F
Sbjct:    5 ELKERHAVATETVNNLRDQLRQRRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEF 199          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB_ORYSJ (Guanine nucleotide-binding protein subunit beta OS=Oryza sativa subsp. japonica GN=Os03g0669200 PE=1 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 1.997e-92
Identity = 158/195 (81.03%), Postives = 175/195 (89.74%), Query Frame = 3
Query:  117 ELKERHAAAIETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGDF 701
            ELKE+HAAA  +VNSLRERL+Q+RQ LLD DV  YSR+QGR PVSF PTDLVCCRTLQGH+GKVYSLDWT E+N IVSASQDGRLIVWNALTSQKTHAIKL C WVMTCAF+P GQSVACGGLDS CSIFNLNS  D+DGN+PVSR+L+GHKGYVS CQYVPD++T LITSSGDQTCVLWD+TTG R S+FGG+F
Sbjct:    6 ELKEKHAAATASVNSLRERLRQRRQMLLDTDVERYSRTQGRTPVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMTCAFAPNGQSVACGGLDSACSIFNLNSQADRDGNIPVSRILTGHKGYVSSCQYVPDQETRLITSSGDQTCVLWDVTTGQRISIFGGEF 200          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB_MAIZE (Guanine nucleotide-binding protein subunit beta OS=Zea mays GN=GB1 PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 5.810e-92
Identity = 157/195 (80.51%), Postives = 175/195 (89.74%), Query Frame = 3
Query:  117 ELKERHAAAIETVNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGDF 701
            ELKE+HAAA  +VNSLRERL+Q+R+ LLD DVA YS+SQGR PVSF PTDLVCCRTLQGH+GKVYSLDWT E+N IVSASQDGRLIVWNALTSQKTHAIKL C WVM CAF+P GQSVACGGLDS CSIFNLNS  D+DGN+PVSR+L+GHKGYVS CQYVPD++T LITSSGDQTCVLWD+TTG R S+FGG+F
Sbjct:    6 ELKEKHAAATASVNSLRERLRQRRETLLDTDVARYSKSQGRVPVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMACAFAPNGQSVACGGLDSACSIFNLNSQADRDGNMPVSRILTGHKGYVSSCQYVPDQETRLITSSGDQTCVLWDVTTGQRISIFGGEF 200          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB1_DANRE (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Danio rerio GN=gnb1 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.988e-43
Identity = 81/184 (44.02%), Postives = 124/184 (67.39%), Query Frame = 3
Query:  153 VNSLRERLKQKRQQLLDVDVAGYSRSQGRAPVSFGPTDLVCCRT---LQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 695
            ++ LR+  +Q + Q+ D   A    +  +   +  P   +  RT   L+GH  K+Y++ W ++   +VSASQDG+LI+W++ T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI+NL +   ++GN+ VSR L+GH GY+SCC+++  +D  ++TSSGD TC LWDI TG +T+ F G
Sbjct:    4 LDQLRQEAEQLKNQIRDARKACADATLSQITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT---REGNVRVSRELAGHTGYLSCCRFL--DDNQIVTSSGDTTCALWDIETGQQTTTFAG 182          
BLAST of CX295512 vs. ExPASy Swiss-Prot
Match: GBB_CRYPA (Guanine nucleotide-binding protein subunit beta OS=Cryphonectria parasitica GN=GB-1 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.508e-43
Identity = 85/191 (44.50%), Postives = 127/191 (66.49%), Query Frame = 3
Query:  120 LKERHAAAIETVNSLRERLKQKRQQLLDVDVAGYS-RSQGRAPVSFGPTDLVCCRTLQGHAGKVYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGYVSCCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVF 689
            ++ R   A      L++R+K+K+ +L D  +   + RS    P +     +   RTL+GH  K+Y++ W+++R  +VSASQDG+LI+W+A T+ K HAI L  +WVMTCA++P+G  VACGGLD++CSI+NLN   ++DG   V+R LSGH GY+SCC+++   D  ++TSSGD TC+ WDI TG +   F
Sbjct:   14 MQARIQQARREAEGLKDRIKRKKDELADTSLRDVAHRSHEAIPRN---QLMKTKRTLKGHLAKIYAMHWSTDRRHLVSASQDGKLIIWDAYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLNQ--NRDGPTRVARELSGHAGYLSCCRFI--NDRSILTSSGDMTCMKWDIETGTKQIEF 197          
The following BLAST results are available for this feature:
BLAST of CX295512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
GBB1_TOBAC3.074e-10189.23Guanine nucleotide-binding protein subunit beta-1 ... [more]
GBB_NICPL1.168e-10088.72Guanine nucleotide-binding protein subunit beta OS... [more]
GBB2_TOBAC1.526e-10088.72Guanine nucleotide-binding protein subunit beta-2 ... [more]
GBB3_TOBAC2.602e-10088.21Guanine nucleotide-binding protein subunit beta OS... [more]
GBB_SOLTU6.409e-9987.18Guanine nucleotide-binding protein subunit beta OS... [more]
GBB_ARATH1.478e-9583.59Guanine nucleotide-binding protein subunit beta OS... [more]
GBB_ORYSJ1.997e-9281.03Guanine nucleotide-binding protein subunit beta OS... [more]
GBB_MAIZE5.810e-9280.51Guanine nucleotide-binding protein subunit beta OS... [more]
GBB1_DANRE4.988e-4344.02Guanine nucleotide-binding protein G(I)/G(S)/G(T) ... [more]
GBB_CRYPA8.508e-4344.50Guanine nucleotide-binding protein subunit beta OS... [more]

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Properties
Property NameValue
Genbank descriptionC05073A03SK DroRLeaf1 Citrus clementina cDNA clone C05073A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295512 ID=CX295512; Name=CX295512; organism=Citrus clementina; type=EST; length=707bp
TTTCGAGCTTAAAGTTGAAGCAAACATGCGATGTAGAAATTTAAATTTTA
TCTACTCTTTTTTTTTTTTTCCTTGTAAGTTCGATTGATTGATAAAACAT
GTCGTCGTCGGTCTCGGAGCTGAAAGAGAGACACGCGGCGGCCATTGAGA
CGGTTAACAGTCTCAGAGAACGGCTCAAGCAGAAGCGACAGCAGTTGCTC
GACGTAGACGTTGCTGGGTACTCGAGGTCGCAGGGTCGGGCTCCGGTCAG
CTTTGGTCCGACCGATCTAGTTTGTTGTAGGACCTTGCAAGGCCACGCTG
GCAAGGTATATTCATTGGACTGGACTTCTGAAAGGAATCGAATTGTCAGT
GCATCTCAAGATGGAAGGTTAATAGTGTGGAATGCTCTTACAAGCCAGAA
AACTCATGCTATAAAACTGCCTTGTGCTTGGGTAATGACTTGTGCCTTCT
CTCCAACTGGTCAATCTGTTGCCTGTGGTGGTCTTGATAGTGTTTGCTCC
ATTTTCAACCTGAATTCTCCTACTGACAAGGACGGGAATTTACCAGTATC
AAGAATGCTTAGTGGGCACAAGGGTTATGTGTCCTGCTGTCAGTATGTTC
CCGATGAGGACACTCACCTAATTACCAGTTCGGGTGACCAAACCTGTGTT
TTGTGGGATATTACTACGGGCCTTAGAACTTCTGTTTTTGGAGGAGATTT
CAGTCTG
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