CX295513

Overview
NameCX295513
Unique NameCX295513
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15314 contig Ccv1_Contig15314:26..725. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295513 vs. ExPASy Swiss-Prot
Match: CHLY_HEVBR (Hevamine-A OS=Hevea brasiliensis PE=1 SV=2)

HSP 1 Score: 318.546 bits (815), Expect = 2.104e-86
Identity = 153/200 (76.50%), Postives = 167/200 (83.50%), Query Frame = 1
Query:   34 LLVTLSLIKASQ--GAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 627
            LL+ +SLI +S     GGIAIYWGQNGNEGTLT TC+T KY+YVNIAFLNKFGNGQTP+INLAGHCNPAAGGC +VS+ I+SCQ +GIKVM                DAKNVADYLWNNFLGG SSSRPLG AVLDGIDFDIE GSTL+WDDLAR+LSAYS +GKKVYLTAAPQCPFPDR+LG ALNTGLFDYVWVQFYN
Sbjct:   11 LLLAISLIMSSSHVDGGGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGIDFDIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYN 210          
BLAST of CX295513 vs. ExPASy Swiss-Prot
Match: CHIA_ARATH (Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 2.007e-81
Identity = 134/197 (68.02%), Postives = 151/197 (76.65%), Query Frame = 1
Query:   40 VTLSLIKASQGA-GGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 627
            ++ SL K S  + GGIAIYWGQNGNEG L++TCATG+YAYVN+AFL KFGNGQTPE+NLAGHCNPAA  C      +K CQSRGIKVM                DAK +ADYLWNNFLGG SSSRPLG AVLDGIDF+IE GS  HWDDLAR LS +S RG+K+YLT APQCPFPDR +G+ALNT  FDYVW+QFYN
Sbjct:   17 ISCSLSKPSDASRGGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYLWNNFLGGKSSSRPLGDAVLDGIDFNIELGSPQHWDDLARTLSKFSHRGRKIYLTGAPQCPFPDRLMGSALNTKRFDYVWIQFYN 213          

HSP 2 Score: 43.1282 bits (100), Expect = 2.007e-81
Identity = 16/24 (66.67%), Postives = 20/24 (83.33%), Query Frame = 3
Query:  627 HPPCQYSSGNTQNLISSFNRWASS 698
            +PPC YSSGNTQNL  S+N+W +S
Sbjct:  214 NPPCSYSSGNTQNLFDSWNKWTTS 237          
BLAST of CX295513 vs. ExPASy Swiss-Prot
Match: CHIT3_VITVI (Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.118e-79
Identity = 147/203 (72.41%), Postives = 160/203 (78.82%), Query Frame = 1
Query:   34 LLVTLSLIKASQG--AGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSA---YSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 627
            LL++LS++   Q   AGGIAIYWGQNGNEGTLT TC TGKY+YVNIAFLNKFGNGQTPEINLAGHCNPA+ GC  VS  I++CQ+RGIKVM                DA+NVA+YLWNNFLGG SSSRPLG AVLDGIDFDIE GSTLHWDDLAR LS       RG+KVYLTAAPQCPFPD+  G ALNTGLFDYVWVQFYN
Sbjct:   10 LLISLSVLALLQTSYAGGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTSVSTGIRNCQNRGIKVMLSIGGGAGSYSLSSSNDAQNVANYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGSTLHWDDLARALSRIEFQQERGRKVYLTAAPQCPFPDKVPGTALNTGLFDYVWVQFYN 212          
BLAST of CX295513 vs. ExPASy Swiss-Prot
Match: CHIA_TOBAC (Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 8.990e-70
Identity = 123/202 (60.89%), Postives = 148/202 (73.27%), Query Frame = 1
Query:   22 TFVSLLVTLSLIKASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 627
            +F+   + L L      AG I IYWGQNGNEG+L  TCAT  YA VNIAFL  FGNGQ P +NLAGHC+P AG C  +S+ I++CQ++GIKVM                DA+NVA+YLWNN+LGG S++RPLG AVLDGIDFDIE G+T HWD+LA+ LS +S + +KVYLTAAPQCPFPD +L  AL+TGLFDYVWVQFYN
Sbjct:    5 SFLLTALVLFLRALKLEAGDIVIYWGQNGNEGSLADTCATNNYAIVNIAFLVVFGNGQNPVLNLAGHCDPNAGACTGLSNDIRACQNQGIKVMLSLGGGAGSYFLSSADDARNVANYLWNNYLGGQSNTRPLGDAVLDGIDFDIEGGTTQHWDELAKTLSQFSQQ-RKVYLTAAPQCPFPDTWLNGALSTGLFDYVWVQFYN 205          

HSP 2 Score: 32.3426 bits (72), Expect = 8.990e-70
Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  627 HPPCQYSSGNTQNLISSFNRW 689
            +PPCQYS G+  NL + +N+W
Sbjct:  206 NPPCQYSGGSADNLKNYWNQW 226          
BLAST of CX295513 vs. ExPASy Swiss-Prot
Match: CHIA_CICAR (Acidic endochitinase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.372e-67
Identity = 114/197 (57.87%), Postives = 143/197 (72.59%), Query Frame = 1
Query:   37 LVTLSLIKASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 627
            L+ +SL+  S  A GIA+YWGQNGNEG+L   C T  Y +VNIAFL+ FGNGQ P+INLAGHC+P+  GC   S  I++CQ++GIKV+                +A  +A+YLWNNFLGGTS+SRPLG AVLDGIDFDIE G   H+D+LA+ L+ +S   +KVYL+AAPQCP+PD  L +A+ TGLFDYVWVQFYN
Sbjct:   11 LLLISLLIKSSNAAGIAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQINLAGHCDPSTNGCTKFSPEIQACQAKGIKVLLSLGGGAGSYSLNSAEEATTLANYLWNNFLGGTSTSRPLGDAVLDGIDFDIESGGQ-HYDELAKALNGFSQ--QKVYLSAAPQCPYPDAHLDSAIQTGLFDYVWVQFYN 204          

HSP 2 Score: 37.7354 bits (86), Expect = 2.372e-67
Identity = 13/24 (54.17%), Postives = 20/24 (83.33%), Query Frame = 3
Query:  627 HPPCQYSSGNTQNLISSFNRWASS 698
            +P CQYS+GN  NL++++N+W SS
Sbjct:  205 NPQCQYSNGNINNLVNAWNQWTSS 228          
BLAST of CX295513 vs. ExPASy Swiss-Prot
Match: CHIA_CUCSA (Acidic endochitinase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.887e-64
Identity = 117/204 (57.35%), Postives = 140/204 (68.63%), Query Frame = 1
Query:   16 IATFVSLLVTLSLIKASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 627
            I T +S+   LS I  S  A GIAIYWGQNGNEG+L STCATG Y +VNIAFL+ FG+GQ P +NLAGHCNP   GC  +SD I SC+S+ +KV+                DAK VA+++WN++LGG S SRPLGAAVLDG+DFDIE GS   WD LA+ L  +     +V L+AAPQCP PD  L AA+ TGLFD VWVQFYN
Sbjct:    6 ITTTLSIFFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSSFGSGQAPVLNLAGHCNPDNNGCAFLSDEINSCKSQNVKVLLSIGGGAGSYSLSSADDAKQVANFIWNSYLGGQSDSRPLGAAVLDGVDFDIESGSGQFWDVLAQELKNFG----QVILSAAPQCPIPDAHLDAAIKTGLFDSVWVQFYN 205          

HSP 2 Score: 28.4906 bits (62), Expect = 8.887e-64
Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  627 HPPCQYSSGNTQNLISSFNRWAS 695
            +PPC ++  N  NL+SS+N+W +
Sbjct:  206 NPPCMFAD-NADNLLSSWNQWTA 227          
BLAST of CX295513 vs. ExPASy Swiss-Prot
Match: CHIA_PHAAN (Acidic endochitinase OS=Phaseolus angularis PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.916e-63
Identity = 117/197 (59.39%), Postives = 137/197 (69.54%), Query Frame = 1
Query:   37 LVTLSLIKASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 627
            L+ +S  K S  AGGI++YWGQNGNEG+L   C TG Y YVNIAFL  FG GQTP++NLAGHCNP+   C V SD IK CQS+ IKV+                DA  VA+Y+WNNFLGG SSSRPLG A+LDG+DFDIE G+  HWDDLAR L  ++S   ++ LTAAPQCP PD  L  A+ TGLFD VWVQFYN
Sbjct:   18 LLFISFFKPSH-AGGISVYWGQNGNEGSLADACNTGNYKYVNIAFLFTFGGGQTPQLNLAGHCNPSINNCNVFSDQIKECQSKDIKVLLSLGGASGSYSLTSADDATQVANYIWNNFLGGQSSSRPLGDAILDGVDFDIESGTGEHWDDLARALKGFNS---QLLLTAAPQCPIPDAHLDTAIKTGLFDIVWVQFYN 210          
BLAST of CX295513 vs. ExPASy Swiss-Prot
Match: CHIB_TOBAC (Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.342e-61
Identity = 116/198 (58.59%), Postives = 139/198 (70.20%), Query Frame = 1
Query:   34 LLVTLSLIKASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 627
            L + L L+ +   AG I +YWGQ+  EG L  TC +G Y  VNIAFL+ FGN QTP++NLAGHC P++GGC+ ++ +I+ CQS GIK+M                DA+ VADYLWNNFLGG SS RPLG AVLDGIDFDIE G   H+  LAR LS +  +GKK+YLTAAPQCPFPD+ L  AL TGLFDYVWVQFYN
Sbjct:   11 LPIFLLLLTSKVKAGDIVVYWGQDVGEGKLIDTCNSGLYNIVNIAFLSSFGNFQTPKLNLAGHCEPSSGGCQQLTKSIRHCQSIGIKIMLSIGGGTPTYTLSSVDDARQVADYLWNNFLGGQSSFRPLGDAVLDGIDFDIELGQP-HYIALARRLSEHGQQGKKLYLTAAPQCPFPDKLLNGALQTGLFDYVWVQFYN 207          
BLAST of CX295513 vs. ExPASy Swiss-Prot
Match: CHIE_BETVU (Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 4.330e-60
Identity = 114/208 (54.81%), Postives = 138/208 (66.35%), Query Frame = 1
Query:   19 ATFVSLLVTLSLI-----KASQGAGGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 627
            A  VS+L  +SL+     ++S G+  I IYWGQNG+EG+L  TC +G Y  V +AF+  FGNGQTP +NLAGHC+PA   C  +S  IK+CQ  GIKV+                DA   ADYLWN +LGG SS+RPLG AVLDGIDFDIE G    WDDLAR L+ +++  K VYL+AAPQCP PD  L  A+ TGLFDYVWVQFYN
Sbjct:    3 AKIVSVLFLISLLIFASFESSHGSQ-IVIYWGQNGDEGSLADTCNSGNYGTVILAFVATFGNGQTPALNLAGHCDPATN-CNSLSSDIKTCQQAGIKVLLSIGGGAGGYSLSSTDDANTFADYLWNTYLGGQSSTRPLGDAVLDGIDFDIESGDGRFWDDLARALAGHNNGQKTVYLSAAPQCPLPDASLSTAIATGLFDYVWVQFYN 208          

HSP 2 Score: 30.0314 bits (66), Expect = 4.330e-60
Identity = 11/23 (47.83%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  627 HPPCQYSSGNTQNLISSFNRWAS 695
            +PPCQY + +  NL+SS+N+W +
Sbjct:  209 NPPCQYDT-SADNLLSSWNQWTT 230          
BLAST of CX295513 vs. ExPASy Swiss-Prot
Match: CHI1_RHINI (Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.749e-32
Identity = 81/211 (38.39%), Postives = 112/211 (53.08%), Query Frame = 1
Query:   28 VSLLVTLSLIKASQGAGGIAIYWGQNG-----NEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINLAGHC------NPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 627
            ++  +T +L   S     +  YWGQN       +G+L S C +G+   + ++FLNKF  G  PEINLA  C      N     C  V   IK+CQS G+KV+                + +  A+ +WN F GGTS +RP   AV+DGID DIE GS+  +   A F++A  S+G    + AAPQCPFPD  LG+ ++    D+V VQFYN
Sbjct:   11 IAAFITSTLAAYSSNGVNVMYYWGQNSAGGSNTQGSLVSYCQSGQVDVIILSFLNKFNMGGLPEINLASACEQTFFPNTNLLHCPTVGSDIKTCQSNGVKVLLSLGGAAGSYGFSSDSEGQTFAETIWNLFGGGTSDTRPFDDAVIDGIDLDIEGGSSTGY---AAFVTALRSKG-HFLIGAAPQCPFPDAILGSVIDAVGLDFVNVQFYN 217          
The following BLAST results are available for this feature:
BLAST of CX295513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CHLY_HEVBR2.104e-8676.50Hevamine-A OS=Hevea brasiliensis PE=1 SV=2[more]
CHIA_ARATH2.007e-8168.02Acidic endochitinase OS=Arabidopsis thaliana GN=CH... [more]
CHIT3_VITVI1.118e-7972.41Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE... [more]
CHIA_TOBAC8.990e-7060.89Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=... [more]
CHIA_CICAR2.372e-6757.87Acidic endochitinase OS=Cicer arietinum PE=2 SV=1[more]
CHIA_CUCSA8.887e-6457.35Acidic endochitinase OS=Cucumis sativus PE=1 SV=1[more]
CHIA_PHAAN1.916e-6359.39Acidic endochitinase OS=Phaseolus angularis PE=2 S... [more]
CHIB_TOBAC2.342e-6158.59Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1[more]
CHIE_BETVU4.330e-6054.81Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 P... [more]
CHI1_RHINI1.749e-3238.39Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05073A04SK DroRLeaf1 Citrus clementina cDNA clone C05073A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295513 ID=CX295513; Name=CX295513; organism=Citrus clementina; type=EST; length=699bp
AGAAACTCTCCAGCAATAGCAACATTCGTCTCCCTGCTGGTCACTCTGTC
ATTGATCAAAGCCTCTCAAGGCGCCGGCGGCATCGCAATCTATTGGGGCC
AAAACGGCAACGAGGGTACCCTCACTTCAACCTGTGCCACAGGCAAATAT
GCTTATGTCAACATAGCTTTCCTGAACAAGTTTGGCAACGGCCAGACCCC
TGAAATTAACCTTGCCGGCCACTGCAACCCTGCAGCCGGTGGCTGCAGAG
TCGTCAGCGACGCAATCAAGAGTTGTCAGAGCCGAGGCATCAAAGTTATG
CTTTCCCTCGGAGGTGGGGTTGGTAGCTACTCTTTGGCTTCTGTAGCTGA
TGCCAAGAATGTAGCTGATTACTTGTGGAACAATTTCTTGGGGGGAACAT
CAAGTTCAAGGCCATTAGGTGCTGCTGTGTTGGACGGTATTGATTTTGAT
ATTGAGCAAGGCTCAACTTTGCATTGGGATGACCTTGCAAGGTTTCTATC
AGCATATAGCAGCCGTGGCAAGAAAGTTTACTTAACAGCAGCTCCCCAGT
GCCCATTTCCTGATAGGTTTCTGGGTGCTGCTTTGAACACGGGGCTTTTT
GATTATGTATGGGTTCAGTTTTACAACACCCACCTTGTCAGTATAGTTCA
GGAAATACCCAGAATCTTATAAGTTCATTTAACAGATGGGCTTCATCAT
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