CX295520

Overview
NameCX295520
Unique NameCX295520
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14941 contig Ccv1_Contig14941:1245..2008. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295520 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 6.061e-61
Identity = 108/204 (52.94%), Postives = 146/204 (71.57%), Query Frame = 2
Query:    5 MLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLE 616
            +L+ L H NIV+FI AC+K  V+CI+TEY   G++R +L +++  ++ ++  ++ ALD++RGM Y+H  G IHRDLKS+NLL++ +  +K+ADFG + +E Q        GTYRWMAPEMI+ +PYT+KVDVYSFGIVLWEL T LLPFQ MT VQAAFAV  K  RP +P  C P L+ ++ RCW  NP  RP F+ IV +LE
Sbjct:  138 LLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCREAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSENPSKRPDFSNIVAVLE 341          
BLAST of CX295520 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.829e-42
Identity = 87/203 (42.86%), Postives = 130/203 (64.04%), Query Frame = 2
Query:    5 MLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRML 613
            +L+ L+H NIV  + AC      C +TEY  GGS+   L  ++ + + ++L  K A+ +A+GM Y+H  G IHRD+KS NLL+    ++KI DFG+++++ ++  MT   G+  WM+PE++    YT+KVDVY+FGI+LWEL TG LP+  + +VQ A AV  K +RP IPN     LS ++  CW  +P  RP FTEI+ +L
Sbjct:  711 ILSRLRHPNIVLLMAACTAPPNLCFITEYLPGGSLYDALHSKKIK-MNMQLYKKLAIQIAQGMNYLHLSGVIHRDIKSLNLLLDEHMNVKICDFGLSKLKSKSTEMTKSIGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGELPYSGLDSVQLALAVTTKSLRPPIPNAWPYQLSHLIQACWHQDPLKRPSFTEILNLL 912          
BLAST of CX295520 vs. ExPASy Swiss-Prot
Match: MLTK_MOUSE (Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.517e-39
Identity = 81/212 (38.21%), Postives = 131/212 (61.79%), Query Frame = 2
Query:    5 MLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVH---GLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETE 631
            +L+ L H NI++F G   +   + IVTEYA  GS+  ++   ++  + ++  +  A DVA+GM Y+H    +  IHRDLKS N++I+AD  +KI DFG +R    T  M+   GT+ WMAPE+IQ  P ++  D YS+G+VLWE++T  +PF+ +  +Q A+ VV K  R  IP+ C    +E++ +CW+ + + RP F +I+ +LE+   +
Sbjct:   56 ILSVLSHRNIIQFYGVILEPPNYGIVTEYASLGSLYDYINSNRSEEMDMEHIMTWATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNHTTHMSL-VGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQCWEADAKKRPSFKQIISILESMSND 266          
BLAST of CX295520 vs. ExPASy Swiss-Prot
Match: MLTK_HUMAN (Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=MLTK PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.112e-38
Identity = 85/231 (36.80%), Postives = 136/231 (58.87%), Query Frame = 2
Query:    5 MLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVH---GLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMTTVR-------KARFRC 667
            +L+ L H NI++F G   +   + IVTEYA  GS+  ++   ++  + +   +  A DVA+GM Y+H    +  IHRDLKS N++I+AD  +KI DFG +R    T  M+   GT+ WMAPE+IQ  P ++  D YS+G+VLWE++T  +PF+ +  +Q A+ VV K  R  IP+ C    +E++ +CW+ + + RP F +I+ +LE+   +     +       KA +RC
Sbjct:   56 ILSVLSHRNIIQFYGVILEPPNYGIVTEYASLGSLYDYINSNRSEEMDMDHIMTWATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNHTTHMSL-VGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQCWEADAKKRPSFKQIISILESMSNDTSLPDKCNSFLHNKAEWRC 285          
BLAST of CX295520 vs. ExPASy Swiss-Prot
Match: PYK2_DICDI (Dual specificity protein kinase pyk2 OS=Dictyostelium discoideum GN=splB PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.237e-38
Identity = 85/206 (41.26%), Postives = 124/206 (60.19%), Query Frame = 2
Query:   23 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLK----LAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY---RWMAPEMIQHRP-YTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLE 616
            H NIV FIGAC K    CI+TEY  GGS+   L    +    +K    L +K A D+A G+ ++H +  +HRDL S N+L+    +IKI+DFG++R + +   MT   G     RW  PE+ ++   Y++KVDVY F +V+WE++TG +PF ++   QA+  V   G+RP IP  C P L  ++T+CW+ +P  RPPFT IV  L+
Sbjct:  907 HQNIVMFIGACYKPA--CIITEYMAGGSLYNILHNPNSSTPKVKYSFPLVLKMATDMALGLLHLHSITIVHRDLTSQNILLDELGNIKISDFGLSREKSREGSMTMTNGGICNPRWRPPELTKNLGHYSEKVDVYCFSLVVWEILTGEIPFSDLDGSQASAQVAYAGLRPPIPEYCDPELKLLLTQCWEADPNDRPPFTYIVNKLK 1110          
BLAST of CX295520 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.237e-38
Identity = 86/211 (40.76%), Postives = 126/211 (59.72%), Query Frame = 2
Query:    5 MLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG--FIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETE 631
            +L  L+H NIV F+GAC +    CIVTEY   GS+   L   ++  +   L ++   D ARGM Y+H      IHRDLK+DNLL+     +K+ADFG+A ++  T   T   GT  W+APE++    YT+K DVYS+ IVLWEL+T L+P+     +Q   + +++G R  +P  C P  + +M RCW+T+P  RP F EI+ ++E   +E
Sbjct:  899 LLCKLRHPNIVLFMGACTEPSSPCIVTEYLSRGSLANILLD-ESIEMDWGLRLQLGFDCARGMTYLHSRNPIIIHRDLKTDNLLVDDSWQVKVADFGLATVKSHTFAKTM-CGTTGWVAPEVLAEEGYTEKADVYSYAIVLWELLTRLIPYAGKNTMQVVRS-IDRGERLPMPAWCPPKYAALMNRCWETDPTHRPSFPEILPIMEGMISE 1106          
BLAST of CX295520 vs. ExPASy Swiss-Prot
Match: M3K12_MOUSE (Mitogen-activated protein kinase kinase kinase 12 OS=Mus musculus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.740e-37
Identity = 77/219 (35.16%), Postives = 129/219 (58.90%), Query Frame = 2
Query:    8 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMTTVRKARFR 664
            L  LKH NI+ F G C +   +CI+ E+   G + + L  R  R V   L V  ++ +A GM Y+H    IHRDLKS N+LI+ D  +KI+DFG ++            GT  WMAPE+I++ P ++KVD++SFG+VLWEL+TG +P++++ +    + V +  +   +P+ C      ++ +CW++ P  RP F +I+  L+ A  ++++T ++  F+
Sbjct:  198 LRKLKHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVL--RAGRPVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNSKPRNRPSFRQILLHLDIASADVLSTPQETYFK 414          
BLAST of CX295520 vs. ExPASy Swiss-Prot
Match: M3K12_HUMAN (Mitogen-activated protein kinase kinase kinase 12 OS=Homo sapiens GN=MAP3K12 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.740e-37
Identity = 77/219 (35.16%), Postives = 129/219 (58.90%), Query Frame = 2
Query:    8 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMTTVRKARFR 664
            L  LKH NI+ F G C +   +CI+ E+   G + + L  R  R V   L V  ++ +A GM Y+H    IHRDLKS N+LI+ D  +KI+DFG ++            GT  WMAPE+I++ P ++KVD++SFG+VLWEL+TG +P++++ +    + V +  +   +P+ C      ++ +CW++ P  RP F +I+  L+ A  ++++T ++  F+
Sbjct:  165 LRKLKHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVL--RAGRPVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNSKPRNRPSFRQILLHLDIASADVLSTPQETYFK 381          
BLAST of CX295520 vs. ExPASy Swiss-Prot
Match: M3K12_RAT (Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.674e-37
Identity = 77/219 (35.16%), Postives = 128/219 (58.45%), Query Frame = 2
Query:    8 LATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMTTVRKARFR 664
            L  LKH NI+ F G C +   +CI+ E+   G + + L  R  R V   L V  ++ +A GM Y+H    IHRDLKS N+LI+ D  +KI+DFG ++            GT  WMAPE+I++ P ++KVD++SFG+VLWEL+TG +P++++ +    + V +  +   +P+ C      ++ +CW+  P  RP F +I+  L+ A  ++++T ++  F+
Sbjct:  198 LRKLKHPNIITFKGVCTQAPCYCILMEFCAQGQLYEVL--RAGRPVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNRKPRNRPSFRQILLHLDIASADVLSTPQETYFK 414          
BLAST of CX295520 vs. ExPASy Swiss-Prot
Match: M3K9_HUMAN (Mitogen-activated protein kinase kinase kinase 9 OS=Homo sapiens GN=MAP3K9 PE=1 SV=3)

HSP 1 Score: 152.91 bits (385), Expect = 1.776e-36
Identity = 85/232 (36.64%), Postives = 132/232 (56.90%), Query Frame = 2
Query:    5 MLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHG---LGFIHRDLKSDNLLIS--------ADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMTTVRKARFRC 667
            + A LKH NI+   G C K    C+V E+A+GG + + L+ ++   +P  + V  A+ +ARGM Y+H    +  IHRDLKS N+LI         ++K +KI DFG+AR   +T  M+   GTY WMAPE+I+   +++  DV+S+G++LWEL+TG +PF+ +  +  A+ V    +   IP+ C    +++M  CW+ +P  RP FT I+  L   E      + K  F C
Sbjct:  194 LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGTYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTIEESGFFEMPKDSFHC 421          
The following BLAST results are available for this feature:
BLAST of CX295520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HT1_ARATH6.061e-6152.94Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
Y9955_DICDI2.829e-4242.86Probable serine/threonine-protein kinase DDB_G0267... [more]
MLTK_MOUSE8.517e-3938.21Mitogen-activated protein kinase kinase kinase MLT... [more]
MLTK_HUMAN1.112e-3836.80Mitogen-activated protein kinase kinase kinase MLT... [more]
PYK2_DICDI3.237e-3841.26Dual specificity protein kinase pyk2 OS=Dictyostel... [more]
DRKD_DICDI3.237e-3840.76Probable serine/threonine-protein kinase drkD OS=D... [more]
M3K12_MOUSE2.740e-3735.16Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_HUMAN2.740e-3735.16Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_RAT4.674e-3735.16Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K9_HUMAN1.776e-3636.64Mitogen-activated protein kinase kinase kinase 9 O... [more]

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Properties
Property NameValue
Genbank descriptionC05073A11SK DroRLeaf1 Citrus clementina cDNA clone C05073A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295520 ID=CX295520; Name=CX295520; organism=Citrus clementina; type=EST; length=764bp
CATGATGCTTGCTACATTGAAGCATCTAAACATTGTGCGGTTCATAGGAG
CATGTCGGAAAAGGATGGTTTGGTGCATTGTGACGGAGTATGCAAAAGGA
GGGTCAGTTAGGCAGTTTCTGACAAGGAGGCAGAATAGGGCTGTGCCGCT
AAAATTGGCGGTTAAGCAGGCACTGGATGTGGCAAGGGGGATGGCATATG
TGCATGGTCTTGGGTTTATCCACAGGGATCTAAAGTCAGATAACCTTCTA
ATCTCTGCAGATAAATCTATCAAAATTGCTGATTTTGGTGTAGCAAGAAT
TGAAGTGCAGACGGAGGGGATGACCCCAGAGACAGGGACGTATCGTTGGA
TGGCTCCAGAGATGATTCAACATAGGCCTTACACACAAAAAGTGGATGTC
TATAGCTTTGGGATTGTCCTTTGGGAGCTAATAACAGGTTTGCTTCCGTT
CCAAAACATGACAGCAGTGCAGGCAGCATTTGCTGTGGTGAATAAAGGTG
TAAGGCCAGTGATCCCAAATGACTGTCTCCCTGTGCTTAGCGAGATCATG
ACTCGCTGCTGGGACACCAACCCGGAAGTTCGTCCACCCTTCACTGAGAT
CGTGAGAATGCTAGAGAATGCTGAAACTGAGATCATGACAACTGTGCGTA
AGGCTCGCTTCAGGTGTTGCATGACTCAACCAATGACAGTTGACTGATCC
ATATTAGAAGGCCCAGGACAGATGATAAAGAGGATATAAATGATTTTGGA
AAGTGACAGAAGCA
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