CX295528

Overview
NameCX295528
Unique NameCX295528
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.405e-48
Identity = 93/153 (60.78%), Postives = 113/153 (73.86%), Query Frame = 3
Query:  267 MGACCSNRIKAETPSHTDVNXXXXXXXXXXXXXXXXXXXXXXLPQTPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            MG C SNRIK +  S T ++                          PR+EGEILQ++N+KNFS S+LK+ATRNFRPDSV+GEGGFG VFKGW+DE SL  ++PGTG++IAVKRLNQEGFQGH+EWL EINYLGQL HPNLVK++GYCLE++HR
Sbjct:    1 MGGCFSNRIKTDIASSTWLSSKFLSRDGSKGSSTAS------FSYMPRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHR 147          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.315e-46
Identity = 87/153 (56.86%), Postives = 113/153 (73.86%), Query Frame = 3
Query:  267 MGACCSNRIKAETPSHTDVNXXXXXXXXXXXXXXXXXXXXXXLPQTPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            MG C S +IKA +P  +                         +   PR+EGEILQS N+K+F++++LK ATRNFRPDSVLGEGGFGSVFKGW+DE +LT+++PGTG++IAVK+LNQ+G+QGH+EWL E+NYLGQ  HPNLVK++GYCLED+HR
Sbjct:    1 MGICLSAQIKAVSPGASP-----KYMSSEANDSLGSKSSSVSIRTNPRTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHR 148          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.899e-45
Identity = 79/108 (73.15%), Postives = 101/108 (93.52%), Query Frame = 3
Query:  402 TPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            +PR+EGEILQS N+K+FS+++LK+ATRNFRPDSVLGEGGFG VFKGW+DE SLT++RPGTG++IAVK+LNQ+G+QGH+EWL E+NYLGQ  H +LVK++GYCLED+HR
Sbjct:   40 SPRTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHR 147          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.480e-45
Identity = 79/106 (74.53%), Postives = 99/106 (93.40%), Query Frame = 3
Query:  408 RSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            ++EGEIL S+ +K+F++++LK ATRNFRPDSV+GEGGFG VFKGW+DE +LT T+PGTG++IAVK+LNQEGFQGH+EWLTEINYLGQL HPNLVK++GYCLED+HR
Sbjct:   41 KTEGEILSSTPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHR 146          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.351e-42
Identity = 74/108 (68.52%), Postives = 97/108 (89.81%), Query Frame = 3
Query:  402 TPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            TPR+EGEIL S N+K F++++LK ATRNFRPDS+LGEGGFG VFKGW+D  +LT+++PG+G+++AVK+L  EG+QGHKEWLTE+NYLGQL HPNLVK+VGYC+E ++R
Sbjct:   55 TPRTEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENR 162          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.078e-40
Identity = 73/106 (68.87%), Postives = 94/106 (88.68%), Query Frame = 3
Query:  408 RSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            ++EGEIL S+ +K+FS+++LK ATRNFR DSV+GEGGFG VF+GW+DE +LT T+  +G++IAVKRLN +GFQGH+EWLTEINYLGQL HPNLVK++GYCLED+ R
Sbjct:   35 KTEGEILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQR 140          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.988e-40
Identity = 72/108 (66.67%), Postives = 94/108 (87.04%), Query Frame = 3
Query:  402 TPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            T R+EGEIL S N+K F++++LK AT+NFR D++LGEGGFG VFKGW+D+ SLT++RPG+G+++AVK+L  EGFQGHKEWLTE+NYLGQL HPNLV +VGYC E ++R
Sbjct:   58 TLRTEGEILSSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENR 165          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.476e-31
Identity = 57/100 (57.00%), Postives = 81/100 (81.00%), Query Frame = 3
Query:  417 GEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLED 716
            G++L+S N+K +++ DLKTAT+NF+PDS+LG+GGFG V++GWVD  +L  +R G+GM++A+KRLN E  QG  EW +E+N+LG L H NLVK++GYC ED
Sbjct:   63 GKLLESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCRED 162          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20
Identity = 47/107 (43.93%), Postives = 74/107 (69.16%), Query Frame = 3
Query:  402 TPRSEGEIL--QSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLED 716
            +PRS  ++   +  N++ FSY +L  AT  F    V+GEGGFG V+KG +  +  +S  P   +++A+K+LN++G QGHK+WL E+ +LG ++HPN+VK++GYC ED
Sbjct:   56 SPRSIKDLYTEREQNLRVFSYEELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPP---LVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGYCSED 159          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.052e-19
Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 3
Query:  450 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            F++ +L  AT NF PD+ LGEGGFG V+KG +D          TG ++AVK+L++ G QG++E+L E+  L  LHHPNLV ++GYC + D R
Sbjct:   74 FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDS---------TGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR 156          
The following BLAST results are available for this feature:
BLAST of CX295528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
NAK_ARATH1.405e-4860.78Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK1B_ARATH1.315e-4656.86Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK1A_ARATH1.899e-4573.15Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
BIK1_ARATH2.480e-4574.53Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK2B_ARATH3.351e-4268.52Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y3545_ARATH1.078e-4068.87Probable receptor-like protein kinase At3g55450 OS... [more]
APK2A_ARATH6.988e-4066.67Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
CX32_ARATH3.476e-3157.00Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5707_ARATH1.239e-2043.93Probable receptor-like protein kinase At5g47070 OS... [more]
PBS1_ARATH3.052e-1947.83Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC05073B08SK DroRLeaf1 Citrus clementina cDNA clone C05073B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295528 ID=CX295528; Name=CX295528; organism=Citrus clementina; type=EST; length=727bp
GGGGAAAAGAAACAAGTAATCAACAATAGCAAAGACCTTTTTTTTTTTTT
TTAACTTCTCATTTGGGTGCTTCTTAATCCAGAATTGAACCCAAATCCCA
CCCTAAAAGTGAAAAAGATCACACCCAAAATCTATTTGTGATCATTTGTT
GAGTTGGAGTTCTGGGTTCTGTTTGTTTCATTGAGGATAGAAAGAGAGAG
TACAAAACAAAACCATAAAGGAAAAAAATTTCTTTAAATAAGATCTGGGT
ATTTTGTTTTGTCTGGATGGGAGCTTGCTGTAGCAACAGGATTAAGGCTG
AGACTCCTTCTCATACTGATGTGAATTCAAAATATTCTAGCAGAGATGTA
AAGAGTTTAAGCAGTTCCAGTGGTAAGGCCTCTTCATTTTCCCTGCCTCA
AACACCACGGAGTGAGGGTGAGATCTTGCAGTCATCAAATATAAAGAATT
TCAGCTACAGCGACCTTAAGACAGCTACCAGAAACTTCCGCCCTGATAGT
GTTTTGGGAGAAGGCGGCTTTGGTTCTGTCTTCAAAGGATGGGTTGACGA
GCATTCACTTACTTCTACAAGGCCTGGTACTGGCATGTTAATTGCTGTGA
AGAGGCTTAACCAAGAAGGTTTCCAGGGTCACAAGGAATGGCTAACAGAA
ATTAACTATCTTGGGCAGTTGCATCATCCTAATCTTGTGAAAGTGGTTGG
TTACTGTTTAGAGGATGATCACCGGCT
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