CX295537

Overview
NameCX295537
Unique NameCX295537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295537 vs. ExPASy Swiss-Prot
Match: DLDH_SYNY3 (Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=lpdA PE=1 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 3.301e-47
Identity = 94/162 (58.02%), Postives = 122/162 (75.31%), Query Frame = 3
Query:    6 ALLAVSGRMRELQSEHHMKALGLQVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDN---IVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG 482
            ALLA SGR+RE+  + H++ LG+Q++   + R+ +A HAN+L +KI+++LTNS+  L VD + G G + GPQ+V    DN   I+ AK+I++  GSVPFVP GIE+D KTV TSD A+KLE +P WIAI+GSGYIGLEFSDVYTALG EVT IEAL  LMPG
Sbjct:   54 ALLAASGRVREMSDQDHLQQLGIQINGVTFTREAIAAHANDLVSKIQSDLTNSLTRLKVDTIRGWGKVSGPQEVTVIGDNETRILKAKEIMLCPGSVPFVPPGIEIDHKTVFTSDEAVKLETLPQWIAIIGSGYIGLEFSDVYTALGCEVTMIEALPDLMPG 215          
BLAST of CX295537 vs. ExPASy Swiss-Prot
Match: DLDH_RHOCA (Dihydrolipoyl dehydrogenase OS=Rhodobacter capsulatus GN=lpd PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.368e-18
Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 3
Query:  180 VDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGL 485
            V  L G G+I  P +VK G D + TAK+I+IATGS      GIE+D +TV+TS  AL L  VP  + ++G+G IGLE   VY  LG+EVT +E LD + PG+
Sbjct:  100 VTYLRGWGSIPAPGQVKVG-DEVHTAKNIVIATGSESSGLPGIEIDEQTVVTSTGALSLAKVPKSMVVIGAGVIGLELGSVYARLGAEVTVVEYLDAITPGM 200          
BLAST of CX295537 vs. ExPASy Swiss-Prot
Match: DLDH2_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=bfmBC PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.649e-17
Identity = 56/166 (33.73%), Postives = 88/166 (53.01%), Query Frame = 3
Query:   69 GLQVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQ---------KVKFGT---DNIVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGLILNWKLAQESHYPRK 530
            G++      + + V      +  K+   + + MK   +D+ TG G ILGP           V+ G    ++++  K +IIATGS P +  G+EVDGK+V+TSD AL++E +P  I IVG G IG+E++ +    G +VT IE  D+++P   L      ES   +K
Sbjct:   70 GVETAGVSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSPLPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEVDGKSVLTSDEALQMEELPQSIIIVGGGVIGIEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKK 235          
BLAST of CX295537 vs. ExPASy Swiss-Prot
Match: DLDH2_HALMA (Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marismortui GN=lpdA2 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.353e-16
Identity = 46/135 (34.07%), Postives = 78/135 (57.78%), Query Frame = 3
Query:   96 DRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTIL--GPQKVKFGTDN----IVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG 482
            D  G+ +  + + T++   + +  K  GV+++ G    +  G  +V  G +      ++ +  I+ATGS P    G E DG+ +++S  AL LE VP+ + +VG+GYIG+E S V+  LG+EVT +E LD ++PG
Sbjct:   83 DMAGMTEWKDGVVTRLTRGVESLCKNAGVNLVEGTAEFVDDGTVRVAHGGEGQGSESLSFEHAIVATGSRPMAVPGFEFDGEHILSSKDALALESVPEKLLVVGAGYIGMELSTVFAKLGAEVTVVEMLDDVLPG 217          
BLAST of CX295537 vs. ExPASy Swiss-Prot
Match: DLDH_ZYMMO (Dihydrolipoyl dehydrogenase OS=Zymomonas mobilis GN=lpd PE=3 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 1.767e-16
Identity = 49/157 (31.21%), Postives = 85/157 (54.14%), Query Frame = 3
Query:   30 MRELQSEHHMK---ALGLQVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF----GTDNIVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP 479
            +R  +  H M+   A GL      +D   +   +  +AT++ + +   ++   V++++GVG + G Q++      G + I+ AKDIIIATG+       +  DGK + T  HALK   +P  + ++GSG IG+EF+  Y   G+EV+ +E   Q++P
Sbjct:   54 LRSAEVYHEMQNAEAYGLTSFKPDFDLDKIIARSREVATRLASGVKTLLRKNKVEVISGVGQLTGNQQMLVETTEGEEKILEAKDIIIATGARARQLPNVHSDGKHIWTYHHALKPPAMPKKLLVIGSGAIGIEFASFYADFGAEVSIVEHAPQILP 210          
BLAST of CX295537 vs. ExPASy Swiss-Prot
Match: DLDH_CHLTE (Dihydrolipoyl dehydrogenase OS=Chlorobium tepidum GN=lpd PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.014e-16
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 3
Query:   60 KALGLQVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF----GTDNIVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMP 479
            +  G+ V    +D       + N+A K    +   +K   V++L G   + G   V      G+  ++ AK+II+ATGS P V  G+E DGK +ITS  AL L+ VP  + +VG G IG+E +  Y   GS+VT +E + +++P
Sbjct:   73 ETFGVNVGNVSFDLAQAVKRSRNVALKSSKGVAYLLKKAAVEVLAGEAVLTGGAGVMVTMPDGSVRMLGAKNIIVATGSTPRVIPGLEPDGKKIITSREALILKEVPKSMIVVGGGAIGVEMAWFYAKAGSKVTIVELMPRMLP 216          
BLAST of CX295537 vs. ExPASy Swiss-Prot
Match: DLDH3_PSEPU (Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putida GN=lpd3 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15
Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 3
Query:  144 RNNLTNSMKALGVDILTGVGTILGPQKVKFGTDNIVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPG 482
            R N  + +K  G   L GVG ++   K + G++  + AKDI+IATGS P    G+ +D + +I S  AL L  VP  + ++G+G IGLE   V+  LGS+VT IE LD++ PG
Sbjct:  104 RKNKVDWIKGWGR--LDGVGKVV--VKAEDGSETALQAKDIVIATGSEPTPLPGVTIDNQRIIDSTGALSLPQVPKHLVVIGAGVIGLELGSVWRRLGSQVTVIEYLDRICPG 212          
BLAST of CX295537 vs. ExPASy Swiss-Prot
Match: DLDH_MANSE (Dihydrolipoyl dehydrogenase OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.683e-15
Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 3
Query:   45 SEHHMKALGLQVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKFGTDN---IVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQL 473
            ++H  K  G++     ++ + + D+  N    +   +    +   V ++ G GTI+ P KV+   +     V  K+I+IATGS      G+  D K +ITS  AL LE VP  + ++G+G IGLE   VY  LG++VT IE L  +
Sbjct:   90 AKHDFKHRGIETGEVKFNFKAMMDYKVNAVKALTGGIAMLFQKNKVKLVRGAGTIVAPNKVEVKGEKGVETVNTKNILIATGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQRLGADVTAIEFLGSI 235          
BLAST of CX295537 vs. ExPASy Swiss-Prot
Match: DLDH_CHLPN (Dihydrolipoyl dehydrogenase OS=Chlamydia pneumoniae GN=lpdA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.683e-15
Identity = 48/143 (33.57%), Postives = 78/143 (54.55%), Query Frame = 3
Query:   54 HMKALGLQVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVK-FGTDN-IVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLM 476
            H +  G+ V     D   +A   N +   IR  L   +++  + +L G G+++   +VK  G D  I+ A  II+ATGS P    G+    + +++S   L+LE +P  +AI+G G IG EF+ ++  LG E+T IEALD ++
Sbjct:   65 HAEQFGIHVDGYTIDYPAMAKRKNTVVQGIRQGLEGLIRSNKITVLKGTGSLVSSTEVKVIGQDTTIIKANHIILATGSEPRPFPGVPFSSR-ILSSTGILELEVLPKKLAIIGGGVIGCEFASLFHTLGVEITVIEALDHIL 206          
BLAST of CX295537 vs. ExPASy Swiss-Prot
Match: DLDH1_ARATH (Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15
Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = 3
Query:   42 QSEHHMKALGLQVHAAGYDRQGVADHANNLATKIRNNLTNSMKALGVDILTGVGTILGPQKVKF----GTDNIVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGL 485
            +++H     G++V +   D   +    +N    +   +    K   V  + G G  + P +V      G + IV  K II+ATGS      GI +D K +++S  AL L  VP  + ++G+GYIGLE   V+  LGSEVT +E    ++P +
Sbjct:  102 EAKHSFANHGIKVSSVEVDLPAMLAQKDNAVKNLTRGIEGLFKKNKVTYVKGYGKFISPNEVSVETIDGGNTIVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLSEVPKKLIVIGAGYIGLEMGSVWGRLGSEVTVVEFAGDIVPSM 253          
The following BLAST results are available for this feature:
BLAST of CX295537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
DLDH_SYNY33.301e-4758.02Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (... [more]
DLDH_RHOCA9.368e-1849.02Dihydrolipoyl dehydrogenase OS=Rhodobacter capsula... [more]
DLDH2_BACSU4.649e-1733.73Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH2_HALMA1.353e-1634.07Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marism... [more]
DLDH_ZYMMO1.767e-1631.21Dihydrolipoyl dehydrogenase OS=Zymomonas mobilis G... [more]
DLDH_CHLTE3.014e-1634.03Dihydrolipoyl dehydrogenase OS=Chlorobium tepidum ... [more]
DLDH3_PSEPU3.332e-1541.59Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putid... [more]
DLDH_MANSE5.683e-1532.88Dihydrolipoyl dehydrogenase OS=Manduca sexta PE=2 ... [more]
DLDH_CHLPN5.683e-1533.57Dihydrolipoyl dehydrogenase OS=Chlamydia pneumonia... [more]
DLDH1_ARATH7.423e-1530.92Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC05073C06SK DroRLeaf1 Citrus clementina cDNA clone C05073C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295537 ID=CX295537; Name=CX295537; organism=Citrus clementina; type=EST; length=616bp
TCTAGGCTCTCCTGGCAGTAAGTGGTCGAATGCGTGAACTTCAGAGTGAG
CATCATATGAAGGCTTTAGGTCTGCAGGTCCATGCTGCTGGGTATGATAG
ACAGGGAGTGGCTGATCATGCAAATAACTTAGCCACAAAAATTCGTAATA
ATTTGACAAATTCAATGAAAGCACTTGGTGTGGACATATTGACAGGTGTT
GGGACAATTTTGGGTCCACAAAAAGTGAAATTTGGGACTGACAACATAGT
AACTGCAAAAGATATCATCATTGCCACTGGTTCTGTCCCGTTTGTTCCTA
AGGGCATTGAAGTTGATGGGAAGACTGTAATTACAAGTGACCATGCACTC
AAATTGGAGTTTGTTCCTGACTGGATTGCAATTGTAGGAAGTGGTTATAT
TGGTCTTGAATTCAGTGATGTATACACTGCCCTTGGAAGTGAGGTTACTT
TCATTGAAGCTTTAGATCAGCTTATGCCTGGATTGATCCTGAATTGGAAA
CTGGCTCAAGAGTCTCATTATCCTCGGAAATTGATTATCACCTGGATGTT
GCACCAGATCACTCCTGCAAGGATGGGAACAGCACATGACTATGATGCTA
ACAGAACAAATACTAA
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