CX295538

Overview
NameCX295538
Unique NameCX295538
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length771
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15236 contig Ccv1_Contig15236:146..918. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295538 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.108e-86
Identity = 140/205 (68.29%), Postives = 170/205 (82.93%), Query Frame = 1
Query:   10 TADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 624
            T  GG QL   GFELAS A  +L V +PW GRFW R+ CS DSSGKF C+T DCGSGQ++CNG GA+PPASLVE T+A + GQDF+D+SLVDGFNLP+ +AP+GGSG  C ++SC AN+N VCP+EL+ KGSDG+VI CKSAC A N+PQYCCTGA+  P+TCPPT +SK+FK+QCPQAYSYAYDD++STF+C GGPNY+ITFCP
Sbjct:   41 TGGGGPQLLSTGFELASGASTSLTVQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSG-DCNSTSCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
BLAST of CX295538 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.225e-85
Identity = 144/205 (70.24%), Postives = 172/205 (83.90%), Query Frame = 1
Query:   10 TADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 624
            T D   QLS  GFELA+   +++D PSPW GRF+ RT+CS D+SGKFTCATADCGSGQV+CNGNGAAPPA+LVE TIA++ GQDF+D+SLVDGFNLP+SVAPQGG+G  C  S+C A++N VCP+ L VKGSDG+VIACKSAC AFN+P+YCCT   +KPETCPP  YSK+FK QCPQAYSYAYDD++STF+C+G P Y ITFCP
Sbjct:   43 TGDQKPQLSLTGFELATGISRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTG-KCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
BLAST of CX295538 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.090e-85
Identity = 143/205 (69.76%), Postives = 169/205 (82.44%), Query Frame = 1
Query:   10 TADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 624
            T D   QLS  GFELASKA +++D PSPW GRFW RT+CS D++GKFTC TADCGSGQV CNG GA PPA+LVE TIAA+ GQD++D+SLVDGFNLP+SVAPQGG+G  C  SSC ANVN VCP+ L VK +DG+VI+CKSAC AF + +YCCT   N PETCPPT+YS+IF+ QCPQAYSYAYDD+ STF+C+GGP+Y ITFCP
Sbjct:   43 TGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
BLAST of CX295538 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.310e-84
Identity = 144/205 (70.24%), Postives = 169/205 (82.44%), Query Frame = 1
Query:   10 TADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 624
            T+D   QL   GF LASKA  TL V +PWKGRFWART+C+ +S GKFTC TADC +GQV CNGNGA PPASLVE  IAA++G DF+D+SLVDG+NLP+SVA +GG+G  C  +SC+ANVNAVCP+EL VKGSD +V+ACKSAC AFN+PQYCCTGAF+   TCP TKYS+IFK QCPQAYSYAYDD TSTF+C+G P+Y ITFCP
Sbjct:   41 TSDQKPQLPNTGFVLASKASLTLGVQAPWKGRFWARTRCTTNS-GKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTG-DCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of CX295538 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 3.017e-84
Identity = 144/205 (70.24%), Postives = 159/205 (77.56%), Query Frame = 1
Query:   10 TADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 624
            T+D   QLS  GFELAS+A   LD P PW GRFWART CS D+SGKF CATADC SGQV CNGNGA PPA+L EF I A  GQDF+D+SLVDGFNLP+SV PQGG+G  C T+SC ANVNAVCPSEL  KGSDG+V+AC SAC  F  PQYCCT   N PETCPPT YS+IF + CP AYSYAYDD+  TF+C GGPNY ITFCP
Sbjct:   42 TSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-DCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of CX295538 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.956e-83
Identity = 139/205 (67.80%), Postives = 168/205 (81.95%), Query Frame = 1
Query:   10 TADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 624
            T D   QLS   FELASKA +++D PSPW GRFW RT+CS D++GKF+C TADCGSGQV CNG GA PPA+LVE TIAA+ GQD++D+SLVDGFNLP+SVAPQGG+G  C  SSC ANVN  CP++L VK +DG+VI+CKSAC AF + +YCCT   + PETCPPT+YS+IF+ QCPQAYSYAYDD+ STF+C+GGP+Y ITFCP
Sbjct:    9 TGDQKPQLSLTAFELASKASQSVDAPSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
BLAST of CX295538 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 4.985e-79
Identity = 136/206 (66.02%), Postives = 153/206 (74.27%), Query Frame = 1
Query:    7 PTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 624
            P + G  QLS  GFELAS+A   LD P PW GRFWART+CS D+SGKF C TADC SGQ+ CNG    PPA+L EFTIAA  GQDF+D+SLVDGFNLP+SV PQGG+G TC   SC ANVN VCPSEL   GSDG+V+AC SAC  F EPQYCCT      E CPPT YS+IF +QCP AYSYA+DD    F+C+GGPNY ITFCP
Sbjct:   38 PASFGNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-TCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242          
BLAST of CX295538 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.530e-64
Identity = 116/207 (56.04%), Postives = 142/207 (68.60%), Query Frame = 1
Query:    4 GPTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 624
            G  A  G +L + GFEL   A + L  P+ W GRFWART C+ D+SG   C T DCG   + CNG G  PP +L EFT+  D G+DF+D+SLVDG+N+ L + P GGSG  C  + C +++NA CP  L V   + NV+ACKSAC  FN  QYCC GA +KPETCPPT YS+IFK+ CP AYSYAYDD TSTF+CTG  NY+ITFCP
Sbjct:   39 GTLAGQGPKLGDGGFELTPGASRQLTAPAGWSGRFWARTGCNFDASGNGRCVTGDCGG--LRCNGGGV-PPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSG-DCKYAGCVSDLNAACPDMLKVMDQN-NVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTGA-NYEITFCP 239          
BLAST of CX295538 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 2.253e-55
Identity = 103/199 (51.76%), Postives = 136/199 (68.34%), Query Frame = 1
Query:   31 LSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGN-VIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 624
            L+  GF+L +    +L +P  W GRFW R  C+ D SG+  CAT DCG G ++CNG G  PPA+L E T+  +   DF+D+SLVDG+NL +S+ P  GSG  C+ + C +++N +CP  L V+  +G  V+ACKSAC+AFN PQYCCTG F  P++C PT YSKIFK  CP+AYSYAYDD TS  +C+   NY +TFCP
Sbjct:   46 LAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCG-GSLSCNGAGGEPPATLAEITLGPEL--DFYDVSLVDGYNLAMSIMPVKGSGQ-CSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKA-NYIVTFCP 239          
BLAST of CX295538 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.021e-49
Identity = 96/195 (49.23%), Postives = 121/195 (62.05%), Query Frame = 1
Query:   43 GFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAAD-KGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 624
            GF L +  +  L+VP+ W GR W R  CS DS G+ +CAT DCG G + CNG   A PA++VE T+        F+D+SLVDGFN P+S+A  GG G  C T++C A+VN  CPS L V+  +G V  C+SAC A    +YCCTG +  P  C PT +S +FK  CP+AYSYAYDD TS   C     Y ITFCP
Sbjct:   58 GFHLGAGEEAALEVPAGWSGRVWPRRGCSFDSRGRGSCATGDCG-GVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGG-GVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC-HAKRYLITFCP 249          
The following BLAST results are available for this feature:
BLAST of CX295538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
TLP1_PYRPY1.108e-8668.29Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TLP1_PRUPE1.225e-8570.24Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TP1A_MALDO2.090e-8569.76Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP1_CASSA2.310e-8470.24Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP_PRUAV3.017e-8470.24Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TP1B_MALDO1.956e-8367.80Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLP2_PRUPE4.985e-7966.02Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
PR5_ARATH4.530e-6456.04Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLPH_ARATH2.253e-5551.76Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TLPH_ORYSJ7.021e-4949.23Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]

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Properties
Property NameValue
Genbank descriptionC05073C07SK DroRLeaf1 Citrus clementina cDNA clone C05073C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295538 ID=CX295538; Name=CX295538; organism=Citrus clementina; type=EST; length=771bp
GAGGGCCCTACCGCAGATGGAGGTGCTCAGCTGTCAGAAAATGGGTTCGA
GTTAGCATCCAAAGCAAAAAAGACTCTCGATGTTCCTTCCCCTTGGAAAG
GCCGTTTCTGGGCTCGAACACAGTGCTCTAGAGATTCCTCCGGCAAGTTC
ACTTGCGCCACTGCAGATTGTGGCTCAGGCCAAGTCACATGCAACGGTAA
TGGTGCAGCCCCACCGGCATCTCTCGTGGAATTCACAATTGCTGCAGACA
AAGGACAAGATTTCTTCGATCTTAGCCTCGTTGATGGCTTTAACTTGCCT
CTTTCAGTTGCCCCACAAGGCGGTTCTGGTGCTACTTGCACGACATCTAG
CTGTAAAGCCAACGTGAATGCTGTTTGTCCATCAGAGCTAGCAGTCAAAG
GATCCGATGGGAATGTTATTGCTTGCAAGAGTGCATGTGCAGCTTTTAAT
GAACCACAATATTGTTGCACTGGGGCATTCAATAAACCTGAGACTTGCCC
ACCGACTAAATATTCTAAGATTTTCAAAGACCAGTGCCCTCAAGCTTATA
GCTATGCTTATGATGATCGCACTAGCACATTTTCTTGCACTGGTGGTCCT
AATTACGATATTACTTTCTGTCCCTGAGAGATATTAGTAAGTAACGGAGG
TTGCCTAAAACTTTCAGCTTAAAATTTTAACATAATTTTAAGGTAATGAT
ATCATGCAATATTTAATAGTAGATGATGAAAATAAAGATAATTTTTTGTG
GTATCAAATTCATCATCATCT
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