CX295542

Overview
NameCX295542
Unique NameCX295542
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295542 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21
Identity = 65/174 (37.36%), Postives = 79/174 (45.40%), Query Frame = 1
Query:   91 MLEKLWDDVVAGPQPDRGLGRLRKITTTPLVVKEGGEAESSSGKFQRSLSMXXXXXXXXXXXXXXXXXXXRKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDCNQIKAKRKEENVALCLMGALK*ILSYS*SWIKIRSYSS*GCWICLLCGR*LKWLYSGETRSKHH 612
            +L+KLWDD+VAGPQP+RGLG LRK+   PL +K+ GE+           S                    RKDNVWRSVFHPGSNL+++ +G +VFD P  PNSPTVYD                                                     W+YSGETRSKHH
Sbjct:    3 LLDKLWDDIVAGPQPERGLGMLRKVPQ-PLNLKDEGES-----------SKITMPTTPTTPVTPTTPISARKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYD-----------------------------------------------------WMYSGETRSKHH 110          
The following BLAST results are available for this feature:
BLAST of CX295542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN4.226e-2137.36Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionC05073C11SK DroRLeaf1 Citrus clementina cDNA clone C05073C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295542 ID=CX295542; Name=CX295542; organism=Citrus clementina; type=EST; length=722bp
TCTATATAAACAAACAATAGAGGAAGTATCTAAATCACTGAAGGATTGGT
TAAGGATTTAGAAACTAGCAGCTAAATTTTAAATTTAAAGATGCTAGAGA
AGCTTTGGGACGATGTTGTGGCAGGGCCTCAGCCTGATCGTGGCCTTGGC
AGGCTGAGGAAAATCACCACAACACCCTTAGTAGTCAAAGAGGGTGGTGA
GGCGGAGTCGTCGTCGGGCAAGTTCCAGAGGTCTCTGTCAATGCCAGCGA
GTCCAGGGGCACCGTCGACGCCAGTGACGCCGACGACTCCGCTGTCGGCG
CGTAAGGACAACGTGTGGAGGAGCGTGTTTCACCCCGGTAGCAACCTTGC
TACTAGGGGTATCGGTGCAGAGGTCTTTGACAAGCCCACACATCCTAACT
CTCCCACTGTTTATGACTGCAACCAAATAAAGGCTAAGAGGAAGGAGGAA
AACGTGGCACTCTGTCTCATGGGCGCGTTGAAATAGATCTTGTCTTATTC
ATGATCATGGATAAAGATTAGATCGTACTCTAGCTAGGGCTGTTGGATCT
GTTTACTTTGCGGTAGATGATTAAAGTGGCTTTACAGTGGGGAGACTAGG
AGCAAGCATCATCACTGAGTGGATGATACGCTCCAGCGATGTAAATGAAT
GTGATGGGTCACCAACTCACCGGATGAGTTGCCTGCAGTCTGTAGATAGT
GTCGTTTCGTTTTGGATTTCGC
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