CX295549

Overview
NameCX295549
Unique NameCX295549
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig860 contig Ccv1_Contig860:95..829. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295549 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.827e-27
Identity = 66/170 (38.82%), Postives = 101/170 (59.41%), Query Frame = 1
Query:   55 DVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGR-SFEDGVRRLVL 555
            D  G+++++ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC  LC+++GR S +DG  RL L
Sbjct:   33 DTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG--YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CX295549 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 1.770e-22
Identity = 60/178 (33.71%), Postives = 91/178 (51.12%), Query Frame = 1
Query:   55 DVHGNKVESTLKYYIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFEDGVRRLVLVRDDEPAF 579
            D+ G K+ +   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +   RR + + D   AF
Sbjct:   38 DIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212          
BLAST of CX295549 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.455e-18
Identity = 63/174 (36.21%), Postives = 87/174 (50.00%), Query Frame = 1
Query:   55 DVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXY-CPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFED-GVRRLVLVRD 564
            D+ G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P  YK   CPS   + +  CNNV   F+   +RRL+L  D
Sbjct:    8 DIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CX295549 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13
Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 1
Query:   55 DVHGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLS-PYNNSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCNNVGRSFEDGVRRLVLVRDDEPAFPVVLI 594
            D+ G  V    +YYIVSAI                 CP+ +IQ  SD+Q G+ +  S P  +   +   T+L + F      +  C E   W +      SG+  +  GG + HP  E +  +FK+EK+G+    YK+V CP   +S    C+++G ++E G R LVL   D+  F VV +
Sbjct:    8 DIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVE----KPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLGSL--AYKLVFCP---KSSSGSCSDIGINYE-GRRSLVLKSSDDSPFRVVFV 175          
The following BLAST results are available for this feature:
BLAST of CX295549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASP_THECC1.827e-2738.8221 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.770e-2233.71Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA3.455e-1836.21Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE2.562e-1330.94Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
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Properties
Property NameValue
Genbank descriptionC05073D06SK DroRLeaf1 Citrus clementina cDNA clone C05073D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295549 ID=CX295549; Name=CX295549; organism=Citrus clementina; type=EST; length=734bp
GGCCTCAACTCTTTGTTGGTCTTGGGCTCCTCATCAGTTCCTGAACCTCT
CCTTGATGTCCACGGAAACAAGGTCGAATCCACCCTTAAGTACTACATAG
TCTCAGCCATCTGGGGAGCTGGCGGTGGTGGAGTTAGCCTACACGGTGGC
AGAAACGGATATTGTCCGCTGGACGTTATCCAGTTACCTTCTGATATGCA
AAATGGAATCGAATTAACACTGTCACCGTATAACAATTCTACAATTGTCC
GAGAATCCACTGATCTCAACTTGAGATTCTCAGTGTTGCTATCTGGACGT
GACTATTGTAACGAACAACCGTTGTGGAAAGTTGATAATTATGACGCGGC
ATCAGGCAAATGGTTTATAACAACCGGGGGACTTGATGGTCACCCTGGAG
CTGAAACTTTGCTAAATTGGTTTAAGCTTGAGAAAATTGGAAATTTTCCA
GGTATATACAAAATCGTTCATTGTCCCTCCGTTTGCGAGTCTTGTGTCAA
ACTCTGCAACAACGTTGGCCGTTCGTTTGAGGATGGCGTTCGACGTCTGG
TTCTGGTTCGTGATGATGAGCCGGCATTTCCTGTTGTGTTAATTCCCGCT
ACAGAAAGATCAACGTCTGTGTAATCAATGTACCCTAACCAGCTAGCGGT
ATTATTATTCTAAATAACGGACCAGGCTAGCTGCTCTTTAATCTCTAGGA
TTAAATTATGAAATAGTACCCTGTGATCCTTTCG
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