CX295555

Overview
NameCX295555
Unique NameCX295555
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13371 contig Ccv1_Contig13371:87..788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: MECR_ARATH (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Arabidopsis thaliana GN=At3g45770 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.151e-74
Identity = 133/184 (72.28%), Postives = 149/184 (80.98%), Query Frame = 3
Query:  108 FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            FS +MSPPSKA+VYE  G PDSV +++ LPPVEVKENDVCVKM+AAPINPSDINRIEGVYPVRP VP                     +PGDWVIPSPPSSGTWQ+YVVK++SVWHKI K+ PMEYAATI VNPLTALRMLEDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +IN+IRDR
Sbjct:   37 FSTIMSPPSKAIVYEEHGSPDSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIEGVYPVRPPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHKIDKECPMEYAATITVNPLTALRMLEDFVNLNSGDSVVQNGATSIVGQCVIQLARLRGISTINLIRDR 220          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: MECR_RAT (Trans-2-enoyl-CoA reductase, mitochondrial OS=Rattus norvegicus GN=Mecr PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.586e-36
Identity = 87/198 (43.94%), Postives = 116/198 (58.59%), Query Frame = 3
Query:  108 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR--VR*S*GKLKDL 692
            +SA   P   +A+VY   G P  VI++  L    V+ +DV VKMLAAPINPSDIN I+G Y + PK+P                  + L PGDWVIP+    GTW++  V  +     + KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN+IRDR  ++    +LKDL
Sbjct:   34 YSAFSEPSHVRALVYGNHGDPAKVIQLKNLELTAVEGSDVHVKMLAAPINPSDINMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSGLKPGDWVIPANAGLGTWRTEAVFSEEALIGVPKDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALGLKTINVIRDRPDIKKLTDRLKDL 231          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: MECR_HUMAN (Trans-2-enoyl-CoA reductase, mitochondrial OS=Homo sapiens GN=MECR PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.765e-35
Identity = 80/185 (43.24%), Postives = 109/185 (58.92%), Query Frame = 3
Query:  108 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            +SA   P   +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPSDIN I+G Y + P++P                  T L PGDWVIP+    GTW++  V  +    ++  D P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN++RDR
Sbjct:   34 YSASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR 218          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: MECR_MOUSE (Trans-2-enoyl-CoA reductase, mitochondrial OS=Mus musculus GN=Mecr PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 4.917e-35
Identity = 85/198 (42.93%), Postives = 116/198 (58.59%), Query Frame = 3
Query:  108 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR--VR*S*GKLKDL 692
            +SAL  P   +A+VY   G P  V+++  L    V+ +DV V+MLAAPINPSDIN I+G Y + PK+P                  + L PGDWVIP+    GTW++  V  +     I KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA    + +IN++RDR  ++    +LKDL
Sbjct:   34 YSALSEPSRVRALVYGNHGDPAKVVQLKNLELTAVEGSDVHVRMLAAPINPSDINMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSALKPGDWVIPANAGLGTWRTEAVFSEEALIGIPKDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALRLKTINVVRDRPDIKKLTDRLKDL 231          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: MECR_BOVIN (Trans-2-enoyl-CoA reductase, mitochondrial OS=Bos taurus GN=MECR PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33
Identity = 80/184 (43.48%), Postives = 106/184 (57.61%), Query Frame = 3
Query:  108 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 656
            FSA   P   +A+VY   G P  V+++  L    V  + V VKMLAAPINPSDIN I+G Y + P++P                  T + PGDWVIP+ P  GTW++  V  +     +  D P++ AAT+ VNP TA RML DF  L   DSI+QN + S VGQ +IQIA  RG+ +IN++RD
Sbjct:   34 FSASAEPSRVRALVYGHHGDPAKVVELKNLELAAVGGSHVHVKMLAAPINPSDINMIQGNYGLLPQLPAVGGNEGVGQVVAVGSGVTGVKPGDWVIPANPGLGTWRTEAVFGEEELITVPSDIPLQSAATLGVNPCTAYRMLVDFERLRPRDSIIQNASNSGVGQAVIQIAAARGLRTINVLRD 217          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: MECR_DANRE (Trans-2-enoyl-CoA reductase, mitochondrial OS=Danio rerio GN=mecr PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.698e-33
Identity = 75/174 (43.10%), Postives = 100/174 (57.47%), Query Frame = 3
Query:  138 AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            A++Y   G P  V+++  L   +V    V VKMLAAPINPSD+N ++G Y + P++P                    L  GDWVIP     GTW++  V        + KD P+  AAT+ VNP TA RML DF  L +GD+++QN A S VGQ +IQIA  +GIH+IN+IRDR
Sbjct:   47 ALLYRNHGEPSQVVQLESLDLPQVGAECVLVKMLAAPINPSDLNMLQGTYAILPELPAVGGNEGVAQVMEVGDKVKTLKVGDWVIPKDAGIGTWRTAAVLKADDLVTLPKDIPVLSAATLGVNPCTAYRMLTDFEELKAGDTVIQNAANSGVGQAVIQIAAAKGIHTINVIRDR 220          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: MECR_DROME (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Drosophila melanogaster GN=CG16935 PE=3 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.680e-32
Identity = 75/184 (40.76%), Postives = 104/184 (56.52%), Query Frame = 3
Query:  108 FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            +S  MS  +K++ Y + G P  V++++E    + K+N V VK+LAAPINP+DIN I+G YPV+PK P                       G  VIP     GTW ++ V  +     +SK   +  AAT  VNP TA RML+DF  L  GD+++QNGA S VGQ + Q+ R  GI+S+ I+RDR
Sbjct:   15 WSRQMSVVAKSLKYTQHGEPQEVLQLVEDKLPDPKDNQVLVKILAAPINPADINTIQGKYPVKPKFPAVGGNECVAEVICVGDKVKGFEAGQHVIPLASGLGTWTTHAVYKEDQLLIVSKKVGLAEAATSTVNPTTAYRMLKDFVQLCPGDTVIQNGANSAVGQAVHQLCRAWGINSVGIVRDR 198          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: MECR1_CAEEL (Probable trans-2-enoyl-CoA reductase 1, mitochondrial OS=Caenorhabditis elegans GN=W09H1.5 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27
Identity = 68/177 (38.42%), Postives = 98/177 (55.37%), Query Frame = 3
Query:  132 SKAVVYEREGPPDSVIKMIELPPVEVKEND-VCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            ++ +VYE    P   I++  +   +    D V V+ +AAPINP+D+N+I+GVYPV+P +P                  + +  GD VIP     GTW+   +  ++    I     MEYAAT  VNP TA RML+DF  L  GD++ QNGA S VG+ +IQI R  GI ++N++R R
Sbjct:   17 TRQLVYEGYRNPPEAIQLKTVTIADKPSADQVLVQWIAAPINPADLNQIQGVYPVKPALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWRELGLHQENDLFPIDNTLSMEYAATFQVNPPTAYRMLKDFIDLKKGDTVAQNGANSAVGKHVIQICRILGIKTVNVVRSR 193          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: MECR_DICDI (Trans-2-enoyl-CoA reductase, mitochondrial OS=Dictyostelium discoideum GN=mecr PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24
Identity = 66/177 (37.29%), Postives = 94/177 (53.11%), Query Frame = 3
Query:  132 SKAVVYEREGPPDSVIKMI-ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSS-GTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 656
            S++V     G P + +K+  E    ++   DV V+ML APINP+D+N I+G Y    +V                   T L   D V+PS     G+W+S  V  +    K+  D P EY +TI +NP TA  +L DF  L  GD I+QN + S+VG  +IQ+A+ RGI +IN+IRD
Sbjct:   17 SRSVKIASHGSPSTALKIENENITDKISNKDVLVEMLHAPINPADLNIIQGTYGTNVQVGGVAGMEGVGVVKKVGSGVTGLKENDLVVPSMKQHFGSWRSKGVWSEQQLFKVPSDIPTEYLSTISINPTTAYLLLNDFVKLQQGDVIIQNASNSMVGLSVIQLAKARGIKTINVIRD 193          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: ETR1_YARLI (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Yarrowia lipolytica GN=ETR1 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23
Identity = 70/192 (36.46%), Postives = 97/192 (50.52%), Query Frame = 3
Query:  108 FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP-VRPK------VPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKI-SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            F    +   +A V+ + G P  VI+++E P  +  EN V +K L   INP+DIN++EGVYP V PK                          + L  GDWV+P     GTW+S+ + +     KI + D     A T+ VNP TA  ML+D   L  GD  +QNG  S VG+  IQI   RG+ SI+++RDR
Sbjct:   20 FGLRFNSVGRAFVFSQTGEPKDVIQVLEYPIEKPLENQVLLKSLGFTINPADINQLEGVYPSVPPKSVQINNEDAAIGGNEGLFQVLDPGAKSGLKKGDWVLPRKTCFGTWRSHALVEADTVVKIDNTDLTKVQATTVSVNPSTAYEMLKD---LKEGDWFIQNGGNSGVGRAAIQIGHIRGLKSISVVRDR 208          
The following BLAST results are available for this feature:
BLAST of CX295555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
MECR_ARATH3.151e-7472.28Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
MECR_RAT7.586e-3643.94Trans-2-enoyl-CoA reductase, mitochondrial OS=Ratt... [more]
MECR_HUMAN3.765e-3543.24Trans-2-enoyl-CoA reductase, mitochondrial OS=Homo... [more]
MECR_MOUSE4.917e-3542.93Trans-2-enoyl-CoA reductase, mitochondrial OS=Mus ... [more]
MECR_BOVIN1.582e-3343.48Trans-2-enoyl-CoA reductase, mitochondrial OS=Bos ... [more]
MECR_DANRE2.698e-3343.10Trans-2-enoyl-CoA reductase, mitochondrial OS=Dani... [more]
MECR_DROME8.680e-3240.76Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
MECR1_CAEEL1.297e-2738.42Probable trans-2-enoyl-CoA reductase 1, mitochondr... [more]
MECR_DICDI2.990e-2437.29Trans-2-enoyl-CoA reductase, mitochondrial OS=Dict... [more]
ETR1_YARLI3.306e-2336.46Probable trans-2-enoyl-CoA reductase, mitochondria... [more]

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Properties
Property NameValue
Genbank descriptionC05073D12SK DroRLeaf1 Citrus clementina cDNA clone C05073D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295555 ID=CX295555; Name=CX295555; organism=Citrus clementina; type=EST; length=702bp
TGGCATTGGCAAGATCAGTGGCGCTAAAACTGATAAACAGATCAATTTCA
GCAGCAAGTATCGAATGGGCCCGTGCTCGTCGGGTCCAAGCCCAACGAGT
TCGGGCCTTCTCGGCTCTAATGTCGCCGCCGTCAAAGGCTGTCGTCTACG
AGCGGGAGGGCCCGCCCGACTCAGTCATCAAAATGATAGAGTTACCGCCG
GTGGAAGTGAAAGAGAATGACGTGTGCGTTAAAATGTTAGCTGCTCCTAT
CAACCCTTCTGATATCAATCGCATTGAAGGGGTGTACCCGGTGAGGCCAA
AAGTGCCAGCAGTTGGAGGGTATGAGGGTGTTGGAGAGGTGTATTCTGTC
GGCTCTGCAGTTACGAGACTGGCCCCCGGTGATTGGGTCATCCCCTCTCC
ACCCTCATCAGGAACATGGCAGAGTTATGTTGTGAAAGATCAGAGTGTCT
GGCACAAAATTAGTAAAGATTCACCTATGGAGTATGCTGCTACCATTATT
GTTAATCCTTTGACTGCTTTAAGAATGCTTGAAGACTTCACAACTCTAAA
TTCAGGAGATTCTATCGTCCAAAATGGTGCAACAAGCATTGTGGGGCAGT
GCATAATTCAGATTGCAAGACATCGTGGCATCCATAGCATTAATATTATA
AGGGATAGGGTCAGATGAAGCTAAGGAAAGCTTAAGGACTTGGTGCAGAT
GA
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