CX295560

Overview
NameCX295560
Unique NameCX295560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig656 contig Ccv1_Contig656:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295560 vs. ExPASy Swiss-Prot
Match: MPPA_SOLTU (Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 7.035e-66
Identity = 121/158 (76.58%), Postives = 145/158 (91.77%), Query Frame = 2
Query:    2 SAGGPGKGMHSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 475
            SAGGPGKGM+SRLY RVLN++PQ+ +FSAFS+IYN++G+FGIQGTT SDF  +A+D+A +ELI+VA P EVDQVQL+RAKQ+TKSAILMNLESRMV SEDIGRQ+LTYGER PVEHFLK ++ V+AKDIASV QKL+SSPLTMASYGDV+++PSYDAV
Sbjct:  340 SAGGPGKGMYSRLYLRVLNQYPQIHAFSAFSSIYNNTGLFGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAKQATKSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLISSPLTMASYGDVLSLPSYDAV 497          
BLAST of CX295560 vs. ExPASy Swiss-Prot
Match: MPPA1_ARATH (Probable mitochondrial-processing peptidase subunit alpha-1 OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.595e-52
Identity = 101/158 (63.92%), Postives = 129/158 (81.65%), Query Frame = 2
Query:    2 SAGGPGKGMHSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 475
            SAGGPGKGMHS LYRRVLNE+ +VQS +AF++I+N +G+FGI G +   F +KAI+LAA+EL  VA  G+V+Q  LDRAK +TKSA+LMNLESRM+ +EDIGRQ+LTYGERKPV+ FLK+V+ +T KDIA    K++S PLTM S+GDV+ VPSYD +
Sbjct:  342 SAGGPGKGMHSWLYRRVLNEYQEVQSCTAFTSIFNDTGLFGIYGCSSPQFAAKAIELAAKELKDVAG-GKVNQAHLDRAKAATKSAVLMNLESRMIAAEDIGRQILTYGERKPVDQFLKSVDQLTLKDIADFTSKVISKPLTMGSFGDVLAVPSYDTI 498          
BLAST of CX295560 vs. ExPASy Swiss-Prot
Match: MPPA2_ARATH (Probable mitochondrial-processing peptidase subunit alpha-2 OS=Arabidopsis thaliana GN=At3g16480 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.349e-51
Identity = 98/158 (62.03%), Postives = 129/158 (81.65%), Query Frame = 2
Query:    2 SAGGPGKGMHSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 475
            SAGGPGKGMHS LY R+LN+  Q QS +AF++++N++G+FGI G T  +F S+ I+L A E+ +VA  G+V+Q  LDRAK +TKSAILMNLESRM+ +EDIGRQ+LTYGERKPV+ FLKTV+ +T KDIA    K+++ PLTMA++GDV+NVPSYD+V
Sbjct:  338 SAGGPGKGMHSWLYLRLLNQHQQFQSCTAFTSVFNNTGLFGIYGCTSPEFASQGIELVASEMNAVAD-GKVNQKHLDRAKAATKSAILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSKVITKPLTMATFGDVLNVPSYDSV 494          
BLAST of CX295560 vs. ExPASy Swiss-Prot
Match: MPPA_NEUCR (Mitochondrial-processing peptidase subunit alpha OS=Neurospora crassa GN=mpp PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23
Identity = 59/150 (39.33%), Postives = 89/150 (59.33%), Query Frame = 2
Query:    2 SAGGPGKGMHSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATP---GEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 442
            SAGGPGKGM+SRLY  VLN+   V+S  AF++ Y  SG+FGI  +         + +  REL ++ T      + ++++ RAK   +S++LMNLESRMV  ED+GRQV  +G + PV    + +  +T KD+  VA++++      A  G
Sbjct:  390 SAGGPGKGMYSRLYTNVLNQHGWVESCVAFNHSYTDSGLFGIAASCYPGRTLPMLQVMCRELHALTTDHGYSALGELEVSRAKNQLRSSLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRVAKRVVGGMANNAGQG 539          
BLAST of CX295560 vs. ExPASy Swiss-Prot
Match: MPPA_PONAB (Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii GN=PMPCA PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23
Identity = 58/158 (36.71%), Postives = 92/158 (58.23%), Query Frame = 2
Query:    2 SAGGPGKGMHSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 475
            SAGGPGKGM SRLY  VLN    + + +++ + Y  +G+  I  +     V + +++  +E I ++  G VD V+L+RAK    S ++MNLESR V+ ED+GRQVL    RK        +  V  +D+  VA K+L     +A+ GD+ ++P+Y+ +
Sbjct:  351 SAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMS--GTVDAVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHI 506          
BLAST of CX295560 vs. ExPASy Swiss-Prot
Match: MPPA_HUMAN (Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens GN=PMPCA PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.318e-23
Identity = 58/158 (36.71%), Postives = 91/158 (57.59%), Query Frame = 2
Query:    2 SAGGPGKGMHSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 475
            SAGGPGKGM SRLY  VLN    + + +++ + Y  +G+  I  +     V + +++  +E I +   G VD V+L+RAK    S ++MNLESR V+ ED+GRQVL    RK        +  V  +D+  VA K+L     +A+ GD+ ++P+Y+ +
Sbjct:  351 SAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMG--GTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHI 506          
BLAST of CX295560 vs. ExPASy Swiss-Prot
Match: MPPA_BLAEM (Mitochondrial-processing peptidase subunit alpha OS=Blastocladiella emersonii PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.318e-23
Identity = 57/148 (38.51%), Postives = 88/148 (59.46%), Query Frame = 2
Query:    2 SAGGPGKGMHSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGD 445
            SAGGPGKGM+SRLY  VLN +  ++S +AF + Y+ + +FGI  +    F     ++ A E + +A    +   ++ RAK   KS++LMNLES+++  EDIGRQVL   +R      +  +  VT  D+  VA+ L++ P TM + G+
Sbjct:  293 SAGGPGKGMYSRLYTNVLNRYRWMESCAAFQHAYSSTSLFGISASCVPSFNPHLCNVLAGEFVHMAR--NLSDEEVARAKNQLKSSLLMNLESQVITVEDIGRQVLAQNQRLEPLELVNNISAVTRDDLVRVAEALVAKPPTMVAVGE 438          
BLAST of CX295560 vs. ExPASy Swiss-Prot
Match: MPPA_BOVIN (Mitochondrial-processing peptidase subunit alpha OS=Bos taurus GN=PMPCA PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.639e-23
Identity = 59/158 (37.34%), Postives = 91/158 (57.59%), Query Frame = 2
Query:    2 SAGGPGKGMHSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 475
            SAGGPGKGM +RLY  VLN    + + +++ + Y  +G+  I  +     V + +++  RE + +A  G VD V+L+RAK    S ++MNLE+R V+ ED+GRQVL    RK        +  V  +DI  VA K+L     +A+ GD+  +P+Y+ V
Sbjct:  351 SAGGPGKGMFTRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIVTREFVLMA--GTVDVVELERAKTQLTSMLMMNLEARPVIFEDVGRQVLATRSRKLPHELCALIRDVKPEDIKRVASKMLRGKPAVAALGDLSELPAYEHV 506          
BLAST of CX295560 vs. ExPASy Swiss-Prot
Match: MPPA_YEAST (Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces cerevisiae GN=MAS2 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.256e-22
Identity = 56/149 (37.58%), Postives = 94/149 (63.09%), Query Frame = 2
Query:    2 SAGGPGKGMHSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEV--DQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 442
            SAGGPGKGM+SRLY  VLN++  V++  AF++ Y+ SG+FGI  +       +A+++ A+++ +     ++   + ++ RAK   KS++LMNLES++V  ED+GRQVL +G + PV   +  +E +   DI+ VA+ + +  +  A  G
Sbjct:  290 SAGGPGKGMYSRLYTHVLNQYYFVENCVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNNAGNG 438          
BLAST of CX295560 vs. ExPASy Swiss-Prot
Match: MPPA_RAT (Mitochondrial-processing peptidase subunit alpha OS=Rattus norvegicus GN=Pmpca PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 58/158 (36.71%), Postives = 90/158 (56.96%), Query Frame = 2
Query:    2 SAGGPGKGMHSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 475
            SAGGPGKGM SRLY  VLN    + + +++ + Y  +G+  I  +     V + +++  +E I +     VD V+L+RAK    S ++MNLESR V+ ED+GRQVL    RK        +  V  +DI  VA K+L     +A+ GD+ ++P+Y+ +
Sbjct:  350 SAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRT--VDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHI 505          
The following BLAST results are available for this feature:
BLAST of CX295560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
MPPA_SOLTU7.035e-6676.58Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA1_ARATH2.595e-5263.92Probable mitochondrial-processing peptidase subuni... [more]
MPPA2_ARATH8.349e-5162.03Probable mitochondrial-processing peptidase subuni... [more]
MPPA_NEUCR1.938e-2339.33Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_PONAB3.306e-2336.71Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_HUMAN4.318e-2336.71Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_BLAEM4.318e-2338.51Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_BOVIN5.639e-2337.34Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_YEAST1.256e-2237.58Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_RAT2.799e-2236.71Mitochondrial-processing peptidase subunit alpha O... [more]

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Properties
Property NameValue
Genbank descriptionC05073E05SK DroRLeaf1 Citrus clementina cDNA clone C05073E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295560 ID=CX295560; Name=CX295560; organism=Citrus clementina; type=EST; length=702bp
CTCAGCTGGGGGCCCTGGAAAAGGAATGCACTCAAGGCTGTATCGTCGTG
TTTTGAATGAGTTCCCGCAAGTTCAGTCCTTTTCAGCATTCAGCAACATC
TACAATCATTCTGGCATGTTTGGAATCCAGGGTACAACTGGCTCTGATTT
CGTATCAAAAGCTATTGATTTAGCAGCGAGGGAGCTTATTTCTGTGGCAA
CTCCAGGAGAAGTTGATCAAGTACAGCTAGACCGCGCCAAACAGTCAACC
AAGTCAGCTATTTTGATGAATTTGGAATCAAGAATGGTTGTTTCCGAAGA
CATAGGTAGACAAGTTCTGACATATGGTGAGAGGAAACCCGTGGAGCATT
TCTTGAAGACTGTGGAAGGAGTTACAGCAAAGGATATTGCTTCCGTAGCA
CAGAAGCTTCTTTCATCTCCTCTCACAATGGCATCATATGGAGATGTCAT
CAATGTCCCAAGCTATGATGCAGTCAGCAGCAAGTTCAAGTCAAAAAAAA
ATTGATTTTTTTTCCTTTTTGGTATCAAACTGGGCAGGCTCCTTACCCGT
TGTCTATATTGTTGTGCATCTGCATTCCTTTGAAGCTCTTTTCCGGTCAA
CTGCAGTTCAAAATAAGAGATTTTCATGACACTCCCATTTTTATGAATAA
TTTGGGTTTTAAGCAAGCAGCAGTTTTAAATATGATGCTGTATTGACAAA
CT
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