CX295564

Overview
NameCX295564
Unique NameCX295564
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length259
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295564 vs. ExPASy Swiss-Prot
Match: AMPN_CAUCR (Aminopeptidase N OS=Caulobacter crescentus GN=pepN PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 5.098e-23
Identity = 53/85 (62.35%), Postives = 62/85 (72.94%), Query Frame = 3
Query:    3 ALRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGV 257
            ALR++       + A+A+ SLK AMKWDE+ FG EYDLDLF IVAV DFN GAMENK LNIFNS L+LA P+TA+D DY  I  V
Sbjct:  212 ALRVFVDPGQASRAAYALDSLKRAMKWDEEAFGREYDLDLFMIVAVRDFNFGAMENKGLNIFNSSLLLADPQTATDLDYERIEAV 296          
BLAST of CX295564 vs. ExPASy Swiss-Prot
Match: AMPN_HAEIN (Aminopeptidase N OS=Haemophilus influenzae GN=pepN PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.695e-23
Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 3
Query:    3 ALRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGV 257
            AL ++    +L +   AM SLK AMKWDED F LEYDLD++ IVAV  FNMGAMENK LNIFNSK VLA+P+TA+D DY AI  V
Sbjct:  211 ALELYVDRGNLNRATWAMESLKKAMKWDEDRFNLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKFVLANPQTATDDDYLAIESV 295          
BLAST of CX295564 vs. ExPASy Swiss-Prot
Match: AMPN_ECOLI (Aminopeptidase N OS=Escherichia coli (strain K12) GN=pepN PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.388e-20
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 3
Query:    3 ALRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAI 248
            AL ++    +L +   AM SLK +MKWDE+ FGLEYDLD++ IVAV  FNMGAMENK LNIFNSK VLA  +TA+D DY  I
Sbjct:  210 ALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDI 291          
BLAST of CX295564 vs. ExPASy Swiss-Prot
Match: AMP1_PLAFQ (M1 family aminopeptidase OS=Plasmodium falciparum (isolate FcB1 / Columbia) PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 6.036e-16
Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 3
Query:    6 LRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGV 257
            L +++  + + K   A+  LK +M +DED FGLEYDL   N+VAV DFN+GAMENK LNIFN+  +LAS + + D  YA IL V
Sbjct:  410 LYVFSEEKYVSKLQWALECLKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTV 493          
The following BLAST results are available for this feature:
BLAST of CX295564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
AMPN_CAUCR5.098e-2362.35Aminopeptidase N OS=Caulobacter crescentus GN=pepN... [more]
AMPN_HAEIN8.695e-2363.53Aminopeptidase N OS=Haemophilus influenzae GN=pepN... [more]
AMPN_ECOLI1.388e-2060.98Aminopeptidase N OS=Escherichia coli (strain K12) ... [more]
AMP1_PLAFQ6.036e-1651.19M1 family aminopeptidase OS=Plasmodium falciparum ... [more]
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Properties
Property NameValue
Genbank descriptionC05073E09SK DroRLeaf1 Citrus clementina cDNA clone C05073E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295564 ID=CX295564; Name=CX295564; organism=Citrus clementina; type=EST; length=259bp
AGGCTCTAAGGATCTGGACCCCAGCACAAGACCTACCGAAGACTGCACAT
GCCATGTATTCGCTTAAGGCAGCAATGAAGTGGGATGAAGATGTTTTTGG
TCTTGAATATGACCTAGATCTTTTCAATATTGTGGCTGTTCCTGACTTTA
ACATGGGAGCAATGGAAAACAAGAGTTTGAATATTTTCAATTCAAAGCTT
GTCCTGGCATCTCCAGAAACTGCTAGTGATGCAGATTATGCTGCAATTTT
GGGAGTCAT
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