CX295569

Overview
NameCX295569
Unique NameCX295569
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig657 contig Ccv1_Contig657:1..717. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295569 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.064e-67
Identity = 92/146 (63.01%), Postives = 100/146 (68.49%), Query Frame = 2
Query:    2 YE*RSFIGGQVASFVGKHGNHIEISLHIFFGCCNNLFRLTKKVGADENLLMKDHTHKFVNKGGEIGELDFRFPIGAPLHGIRAFLSTNQLK-----------------------------------ISFSDWFLSKGGTWMSIQRI 334
            YE R FIGG+V SFV K GNHIE+ LH+FFGC NNLFRL KKVGADENLL+KDHTH FVN+GGEIGELDFR P+GAPLHGIRAFL+TNQLK                                   ISFSDWFLSKGGT MSIQR+
Sbjct:   93 YESRQFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADENLLVKDHTHTFVNRGGEIGELDFRLPMGAPLHGIRAFLTTNQLKPYDKARNAVALALSPVVRALIDPNGAMQDIRNLDNISFSDWFLSKGGTRMSIQRM 238          

HSP 2 Score: 101.293 bits (251), Expect = 1.064e-67
Identity = 44/54 (81.48%), Postives = 51/54 (94.44%), Query Frame = 1
Query:  334 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREMHYDKSANGETFVKGLAMSKA 495
            MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCRE+ YD+ +NG+T++ G+AMSKA
Sbjct:  277 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDELSNGDTYITGIAMSKA 330          

HSP 3 Score: 129.798 bits (325), Expect = 1.426e-29
Identity = 64/81 (79.01%), Postives = 68/81 (83.95%), Query Frame = 2
Query:  473 KDLPCLRQLRQAVGLDNLLYTPDADFSCFADLALTSPEYYYREGQGSFLQCVLTPGDPYMPLPNDEIIRRVAKQVLALIPS 715
            +DL   RQLR AVGLDNLLYTPDADFSCF+DLAL+SPE YY EGQGS +Q VLTPGDPYMPLPND II RV KQVL L PS
Sbjct:  390 QDLEKSRQLRAAVGLDNLLYTPDADFSCFSDLALSSPEDYYIEGQGSLIQAVLTPGDPYMPLPNDAIIERVRKQVLDLFPS 470          
BLAST of CX295569 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.265e-65
Identity = 86/146 (58.90%), Postives = 100/146 (68.49%), Query Frame = 2
Query:    2 YE*RSFIGGQVASFVGKHGNHIEISLHIFFGCCNNLFRLTKKVGADENLLMKDHTHKFVNKGGEIGELDFRFPIGAPLHGIRAFLSTNQLK-----------------------------------ISFSDWFLSKGGTWMSIQRI 334
            YE R+FIGG+V SFV K GNHIE+ LH+FFGC NNLFRL KKVGA++NLL+KDHTH FVN+GGE+GELDFRFP+GAPLHGI AFL+TNQLK                                   ISFS+WF+SKGGT  SIQR+
Sbjct:  111 YESRTFIGGKVGSFVDKQGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLLVKDHTHTFVNRGGELGELDFRFPVGAPLHGINAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGAMTQIRNLDNISFSEWFMSKGGTRTSIQRM 256          

HSP 2 Score: 101.293 bits (251), Expect = 1.265e-65
Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 1
Query:  334 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREMHYDKSANGETFVKGLAMSKAIE 501
            MLKGSPDVYLSGPIR YI +KGGRFHLRWGCRE+ Y+KSANGET+V GLAMSKA +
Sbjct:  295 MLKGSPDVYLSGPIRDYIIEKGGRFHLRWGCREILYEKSANGETYVTGLAMSKATQ 350          

HSP 3 Score: 137.887 bits (346), Expect = 5.236e-32
Identity = 67/81 (82.72%), Postives = 71/81 (87.65%), Query Frame = 2
Query:  473 KDLPCLRQLRQAVGLDNLLYTPDADFSCFADLALTSPEYYYREGQGSFLQCVLTPGDPYMPLPNDEIIRRVAKQVLALIPS 715
            +D+   RQLRQA GLDNLLYTPDADFSCFADLAL SPE YY EGQGS LQCVLTPGDPYMPLPN+EII RV+KQVLAL PS
Sbjct:  408 QDVERSRQLRQAAGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVSKQVLALFPS 488          
BLAST of CX295569 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.797e-64
Identity = 88/146 (60.27%), Postives = 100/146 (68.49%), Query Frame = 2
Query:    2 YE*RSFIGGQVASFVGKHGNHIEISLHIFFGCCNNLFRLTKKVGADENLLMKDHTHKFVNKGGEIGELDFRFPIGAPLHGIRAFLSTNQLK-----------------------------------ISFSDWFLSKGGTWMSIQRI 334
            YE R+FIGG+V SFV K GNHIE+ LH+FFGC NNLFRL KKVGA++NLL+K+HTH FVNKGGEIGELDFRFP+GAPLHGI AFLSTNQLK                                   +SFSDWF+SKGGT  SIQR+
Sbjct:  108 YESRTFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLLVKEHTHTFVNKGGEIGELDFRFPVGAPLHGINAFLSTNQLKTYDKARNAVALALSPVVRALVDPDGALQQIRDLDSVSFSDWFMSKGGTRASIQRM 253          

HSP 2 Score: 94.7449 bits (234), Expect = 1.797e-64
Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 1
Query:  334 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREMHYDKSANGETFVKGLAMSKAIE 501
            MLKGSPDVYLSGPI+KYI DKGGRFHLRWGCRE+ Y+ S++G  +V GLAMSKA +
Sbjct:  292 MLKGSPDVYLSGPIKKYIIDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKATQ 347          

HSP 3 Score: 136.346 bits (342), Expect = 1.524e-31
Identity = 66/81 (81.48%), Postives = 71/81 (87.65%), Query Frame = 2
Query:  473 KDLPCLRQLRQAVGLDNLLYTPDADFSCFADLALTSPEYYYREGQGSFLQCVLTPGDPYMPLPNDEIIRRVAKQVLALIPS 715
            +DL   RQ ++A GLDNLLYTPDADFSCFADLAL SPE YY EGQGS LQCVLTPGDPYMPLPN+EIIRRV+KQVLAL PS
Sbjct:  405 QDLERSRQSKRATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIRRVSKQVLALFPS 485          
BLAST of CX295569 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.196e-64
Identity = 88/146 (60.27%), Postives = 100/146 (68.49%), Query Frame = 2
Query:    2 YE*RSFIGGQVASFVGKHGNHIEISLHIFFGCCNNLFRLTKKVGADENLLMKDHTHKFVNKGGEIGELDFRFPIGAPLHGIRAFLSTNQLKI-----------------------------------SFSDWFLSKGGTWMSIQRI 334
            YE R+FIGG+V SFV + GNHIE+ LH+FFGC NNLFRL KKVGA++NLL+K+HTH FVNKGGEIGELDFRFP+GAPLHGI AFLSTNQLKI                                   SFS+WFLSKGGT  SIQR+
Sbjct:  108 YESRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLLVKEHTHTFVNKGGEIGELDFRFPVGAPLHGINAFLSTNQLKIYDKARNAVALALSPVVRALVDPDGALQQIRDLDNVSFSEWFLSKGGTRASIQRM 253          

HSP 2 Score: 94.7449 bits (234), Expect = 5.196e-64
Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 1
Query:  334 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREMHYDKSANGETFVKGLAMSKAIE 501
            MLKGSPDVYLSGPI+KYI DKGGRFHLRWGCRE+ Y+ S++G  +V GLAMSKA +
Sbjct:  292 MLKGSPDVYLSGPIKKYIMDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKATQ 347          

HSP 3 Score: 134.42 bits (337), Expect = 5.789e-31
Identity = 65/81 (80.25%), Postives = 70/81 (86.42%), Query Frame = 2
Query:  473 KDLPCLRQLRQAVGLDNLLYTPDADFSCFADLALTSPEYYYREGQGSFLQCVLTPGDPYMPLPNDEIIRRVAKQVLALIPS 715
            +DL   RQL++A GLDNLLYTPDADFSCFADLAL SP+ YY EGQGS LQCVLTPGDPYMPL NDEII+RV KQVLAL PS
Sbjct:  405 QDLERSRQLKRAAGLDNLLYTPDADFSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQVLALFPS 485          
BLAST of CX295569 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 6.778e-64
Identity = 85/146 (58.22%), Postives = 98/146 (67.12%), Query Frame = 2
Query:    2 YE*RSFIGGQVASFVGKHGNHIEISLHIFFGCCNNLFRLTKKVGADENLLMKDHTHKFVNKGGEIGELDFRFPIGAPLHGIRAFLSTNQLK-----------------------------------ISFSDWFLSKGGTWMSIQRI 334
            Y+ R+FIGG+V SFV + GNHIE+ LH+FFGC NNLFRL KKVGA++NLL+KDHTH F+NK G IGELDFRFP+GAP+HGIRAFL TNQLK                                   ISFSDWFLSKGGT  SIQR+
Sbjct:   85 YDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLLVKDHTHTFINKDGTIGELDFRFPVGAPIHGIRAFLVTNQLKPYDKLRNSLALALSPVVKALVDPDGAMRDIRNLDSISFSDWFLSKGGTRASIQRM 230          

HSP 2 Score: 98.9821 bits (245), Expect = 6.778e-64
Identity = 44/54 (81.48%), Postives = 51/54 (94.44%), Query Frame = 1
Query:  334 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREMHYDKSANGETFVKGLAMSKA 495
            MLKGSPDVYLSGPI++YITD+GGR HLRWGCRE+ YDKSA+GET+V GLA+SKA
Sbjct:  269 MLKGSPDVYLSGPIKQYITDRGGRIHLRWGCREILYDKSADGETYVTGLAISKA 322          

HSP 3 Score: 124.79 bits (312), Expect = 4.587e-28
Identity = 59/81 (72.84%), Postives = 67/81 (82.72%), Query Frame = 2
Query:  473 KDLPCLRQLRQAVGLDNLLYTPDADFSCFADLALTSPEYYYREGQGSFLQCVLTPGDPYMPLPNDEIIRRVAKQVLALIPS 715
            +D+   RQL++AVGLDNLLYTPDADFSCFADLAL SP  YY EGQG+ LQCVLTPGDPYM +PND+II +VA QV  L PS
Sbjct:  382 QDIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPS 462          
BLAST of CX295569 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.343e-63
Identity = 85/146 (58.22%), Postives = 96/146 (65.75%), Query Frame = 2
Query:    2 YE*RSFIGGQVASFVGKHGNHIEISLHIFFGCCNNLFRLTKKVGADENLLMKDHTHKFVNKGGEIGELDFRFPIGAPLHGIRAFLSTNQLK-----------------------------------ISFSDWFLSKGGTWMSIQRI 334
            YE R FIGG+V SFV + GNHIE+ LH+FFGC +NLFRL KKVGAD NLL+K+HTH FVNKGG IGELDFRFP+GAPLHGI+AFL TNQLK                                   ISFSDWF+SKGGT  SI R+
Sbjct:   93 YESRPFIGGKVGSFVDRQGNHIEMGLHVFFGCYSNLFRLMKKVGADNNLLVKEHTHTFVNKGGTIGELDFRFPVGAPLHGIQAFLRTNQLKVYDKARNAVALALSPVVRALVDPDGALQQVRDLDDISFSDWFMSKGGTRESITRM 238          

HSP 2 Score: 98.9821 bits (245), Expect = 4.343e-63
Identity = 43/54 (79.63%), Postives = 51/54 (94.44%), Query Frame = 1
Query:  334 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREMHYDKSANGETFVKGLAMSKA 495
            MLKGSPDVYLSGPI+KYITD+GGRFHLRWGCRE+ Y+KS +GET+VKGL ++KA
Sbjct:  277 MLKGSPDVYLSGPIKKYITDRGGRFHLRWGCREVLYEKSPDGETYVKGLLLTKA 330          

HSP 3 Score: 122.094 bits (305), Expect = 2.973e-27
Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 2
Query:  473 KDLPCLRQLRQAVGLDNLLYTPDADFSCFADLALTSPEYYYREGQGSFLQCVLTPGDPYMPLPNDEIIRRVAKQVLALIPS 715
            +DL   RQL++AVGLDNLLYT DADFSCF+DLAL+SP  YY EGQGS +Q VLTPGDPYMPLPN+EII +V KQV+ L PS
Sbjct:  390 QDLEKSRQLQRAVGLDNLLYTADADFSCFSDLALSSPADYYIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQVVELFPS 470          
BLAST of CX295569 vs. ExPASy Swiss-Prot
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803) GN=crtQ PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.606e-37
Identity = 69/146 (47.26%), Postives = 90/146 (61.64%), Query Frame = 2
Query:    2 YE*RSFIGGQVASFVGKHGNHIEISLHIFFGCCNNLFRLTKKVGADENLLMKDHTHKFVNKGGEIGELDFRFPIGAPLHGIRAFLSTNQL-----------------------------------KISFSDWFLSKGGTWMSIQRI 334
            YE RSFIGG+V S+V   GNHIE+ LH+FFGC  NLF L +KVGA +NL +K+HTH FVN+GG IGELDFRF  GAP +G++AF +T+QL                                   +ISF++WFLSKGG   S++++
Sbjct:   29 YEARSFIGGKVGSWVDGDGNHIEMGLHVFFGCYYNLFNLMEKVGAKQNLRLKEHTHTFVNQGGRIGELDFRFLTGAPFNGLKAFFTTSQLDTKDKIANSIALATSPIVRGLVDFDGAMKTIRDLDRISFAEWFLSKGGNEGSLKKM 174          

HSP 2 Score: 43.5134 bits (101), Expect = 2.606e-37
Identity = 22/56 (39.29%), Postives = 35/56 (62.50%), Query Frame = 1
Query:  334 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREMHYDKSANGETFVKGLAMSKAIE 501
            ML+GSP  YL  PI++Y+  +G +F+ R   +E+   K  +GET V GL ++  +E
Sbjct:  213 MLEGSPQEYLHKPIQEYLEQRGTKFYTRHKVKEIK-TKVTDGETRVTGLIINDGVE 267          

HSP 3 Score: 106.301 bits (264), Expect = 1.688e-22
Identity = 53/75 (70.67%), Postives = 58/75 (77.33%), Query Frame = 2
Query:  491 RQLRQAVGLDNLLYTPDADFSCFADLALTSPEYYYREGQGSFLQCVLTPGDPYMPLPNDEIIRRVAKQVLALIPS 715
            +QL QA GLDNLLYT DA+FSCFADLALTSP  YYR G+GS LQ VLTPGDP+M   N+ I  RV KQV AL PS
Sbjct:  332 KQLEQAFGLDNLLYTSDAEFSCFADLALTSPADYYRPGEGSLLQLVLTPGDPFMKESNEAIAYRVLKQVKALFPS 406          
BLAST of CX295569 vs. ExPASy Swiss-Prot
Match: ZDS_ANASP (Zeta-carotene desaturase OS=Anabaena sp. (strain PCC 7120) GN=crtQ PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.927e-26
Identity = 63/146 (43.15%), Postives = 83/146 (56.85%), Query Frame = 2
Query:    2 YE*RSFIGGQVASFVGKHGNHIEISLHIFFGCCNNLFRLTKKVGADENLLMKDHTHKFVNKGGEIGELDFRFPIGAPLHGIRAFLSTNQL-----------------------------------KISFSDWFLSKGGTWMSIQRI 334
            +E R F+GG+V S++   GNH+E+ LH+FFGC   LF L  KVGA  +L +K+HTH FVNKGG  G LDFRF  GAP +G++AF +T+QL                                   KISF+DWF S GG+  SI+R+
Sbjct:   29 FESRPFVGGKVGSWIDGDGNHVEMGLHVFFGCYYQLFELMNKVGAFSHLRLKEHTHTFVNKGGRTGALDFRFFTGAPFNGLKAFFTTSQLSLQDKLQNAIALGTSPIVRGLVDFEGAMKTIRNLDKISFADWFRSHGGSNGSIKRM 174          

HSP 2 Score: 106.686 bits (265), Expect = 1.293e-22
Identity = 51/75 (68.00%), Postives = 59/75 (78.67%), Query Frame = 2
Query:  491 RQLRQAVGLDNLLYTPDADFSCFADLALTSPEYYYREGQGSFLQCVLTPGDPYMPLPNDEIIRRVAKQVLALIPS 715
            +QL++A GLDNLLYT DADFSCFADLALTSP  YYR+GQGS LQ VLTPGDP++   N+ I + V KQV  L PS
Sbjct:  331 KQLKEAAGLDNLLYTADADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPS 405          
The following BLAST results are available for this feature:
BLAST of CX295569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
ZDS_NARPS1.064e-6763.01Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_TARER1.265e-6558.90Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_CAPAN1.797e-6460.27Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SOLLC5.196e-6460.27Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ARATH6.778e-6458.22Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_MAIZE4.343e-6358.22Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SYNY32.606e-3747.26Zeta-carotene desaturase OS=Synechocystis sp. (str... [more]
ZDS_ANASP1.927e-2643.15Zeta-carotene desaturase OS=Anabaena sp. (strain P... [more]
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Properties
Property NameValue
Genbank descriptionC05073F02SK DroRLeaf1 Citrus clementina cDNA clone C05073F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295569 ID=CX295569; Name=CX295569; organism=Citrus clementina; type=EST; length=717bp
ATATGAGTAGAGGTCTTTTATTGGTGGTCAAGTGGCTTCATTTGTCGGTA
AACATGGAAACCATATTGAAATCAGCCTGCACATTTTCTTTGGATGCTGC
AATAATCTGTTCCGATTGACAAAAAAGGTCGGTGCGGACGAAAATTTACT
CATGAAGGATCATACTCATAAATTTGTAAATAAGGGTGGTGAAATTGGTG
AACTTGATTTCCGGTTTCCGATTGGAGCTCCATTACATGGGATTCGTGCA
TTTTTGTCTACAAATCAGCTTAAGATAAGCTTCTCTGATTGGTTTTTGTC
CAAGGGTGGTACATGGATGAGTATCCAAAGAATATGCTCAAGGGTTCTCC
GGATGTTTATTTGAGTGGGCCAATAAGAAAATATATCACAGATAAAGGGG
GCAGGTTCCATCTTAGGTGGGGATGCAGAGAGATGCATTATGATAAATCT
GCTAACGGGGAAACATTTGTCAAAGGACTTGCCATGTCTAAGGCAATTGA
GGCAAGCTGTGGGGTTAGATAACCTTTTATATACTCCAGATGCAGATTTC
TCTTGCTTTGCAGATCTAGCACTCACTTCACCAGAATACTACTACAGAGA
AGGGCAAGGTTCATTTCTCCAATGCGTTTTGACGCCTGGAGATCCTTATA
TGCCCTTACCAAATGATGAAATCATAAGGAGAGTGGCAAAGCAGGTTTTA
GCTCTAATTCCATCATC
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