CX295571

Overview
NameCX295571
Unique NameCX295571
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295571 vs. ExPASy Swiss-Prot
Match: Y1821_SYNY3 (Putative zinc metalloprotease slr1821 OS=Synechocystis sp. (strain PCC 6803) GN=slr1821 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.132e-32
Identity = 73/139 (52.52%), Postives = 91/139 (65.47%), Query Frame = 1
Query:  313 SVLEAAGVLTAIIIVHESGHFLAAYLQGIHVSKFAVGFGPILAKFSANNVEYSIRAFPLGGFVGFPDNDPESGIPVDDENLLKNRPILDRVIVISXXXXXXXXXXXXXXXTQVLSVGLPVQDAFPGGLVPEVEPFSCSR 729
            + L A GVL  +I VHE GHF AA LQGIHV++FA+GFGP L K+     EYSIRA PLGG+V FPD+DP+S IP DD NLLKNRPILDR IVIS                QV ++G   Q+  PG ++P+V+  S ++
Sbjct:    5 AALAAIGVLAVLIAVHELGHFAAARLQGIHVTRFALGFGPPLLKYQGAETEYSIRAIPLGGYVAFPDDDPDSEIPADDPNLLKNRPILDRAIVISAGVIANLVFAYFLLIGQVSTIGF--QNIQPGLVIPQVDSASAAQ 141          
BLAST of CX295571 vs. ExPASy Swiss-Prot
Match: Y3971_ANASP (Putative zinc metalloprotease all3971 OS=Anabaena sp. (strain PCC 7120) GN=all3971 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.634e-31
Identity = 71/134 (52.99%), Postives = 90/134 (67.16%), Query Frame = 1
Query:  313 SVLEAAGVLTAIIIVHESGHFLAAYLQGIHVSKFAVGFGPILAKFSANNVEYSIRAFPLGGFVGFPDNDPESGIPVDDENLLKNRPILDRVIVISXXXXXXXXXXXXXXXTQVLSVGLPVQDAFPGGLVPEVEP 714
            SVL A  VL  +I+VHE GHF+AA  QGIHV++F++GFGP+L K+     EY+IRAFPLGGFVGFPD+DP+S IP +D NLL+NRPILDR IVIS                QV  VG+  Q + PG  + ++ P
Sbjct:    2 SVLAAIAVLAVLILVHELGHFVAARSQGIHVNRFSLGFGPVLWKYQGAETEYAIRAFPLGGFVGFPDDDPDSDIPPNDPNLLRNRPILDRAIVISAGVIANLIFAYMLLLAQVGFVGIG-QASQPGVSIQQLAP 134          
BLAST of CX295571 vs. ExPASy Swiss-Prot
Match: Y1693_CLOPE (Putative zinc metalloprotease CPE1693 OS=Clostridium perfringens GN=CPE1693 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.878e-11
Identity = 42/139 (30.22%), Postives = 66/139 (47.48%), Query Frame = 1
Query:  316 VLEAAGVLTAIIIVHESGHFLAAYLQGIHVSKFAVGFGPILAKFSANNVEYSIRAFPLGGFVGFPDNDPESGIPVDDENLLKNRPILDRVIVISXXXXXXXXXXXXXXXTQVLSVGLPVQDAFPGGLVPEVEPFSCSRD 732
            ++ A    +A+I+VHE GHF+ A L GI+V +FA+G GP L        EY++R  P GGFV     + ES    DD   L  +  + R++V+                  ++ +GL +   F    V  V P S +++
Sbjct:    3 IIFALLAFSALILVHELGHFIVAKLNGIYVEEFAIGMGPKLFGVKVGETEYNLRILPFGGFVKMLGEEDES----DDSRSLNAKTPIQRILVMG------AGAFMNYVLALIIFIGLAMSSGFAENKVASVVPNSPAQE 131          
The following BLAST results are available for this feature:
BLAST of CX295571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y1821_SYNY31.132e-3252.52Putative zinc metalloprotease slr1821 OS=Synechocy... [more]
Y3971_ANASP1.634e-3152.99Putative zinc metalloprotease all3971 OS=Anabaena ... [more]
Y1693_CLOPE1.878e-1130.22Putative zinc metalloprotease CPE1693 OS=Clostridi... [more]
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Properties
Property NameValue
Genbank descriptionC05073F04SK DroRLeaf1 Citrus clementina cDNA clone C05073F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295571 ID=CX295571; Name=CX295571; organism=Citrus clementina; type=EST; length=742bp
AGGATATCTTCGCTTACCTCTCATCCTTTTCTTCTTCAAAAAACAGATAC
CATGCTAATAAATTTCTCAACCTCCCCTCCATCTTCTTATTCTCTTATCA
AAATTTCCAATTCGAAGTTGCCCATCTCAGAATTCCCTCTCAAACCCAAA
ATCCATCTCTCAAAATCTCATTTTTCTTGTGCTTGTTCTTCGTCAAGCCT
CAGTTTTTATTGCAAGAACCAATTATTTTATGAAAAGAGCAAGTACCCAT
TTCGGAAAAGACTTAATTTCAGGACGTGTGCTGTTTCGGGATTTGATTTG
GGGAGTTTTGAATCTGTTCTGGAGGCAGCTGGAGTGTTGACAGCTATTAT
CATTGTTCATGAAAGTGGTCACTTTCTTGCTGCCTATCTTCAAGGAATTC
ATGTAAGTAAATTTGCAGTTGGTTTTGGTCCAATTTTAGCTAAATTCAGT
GCAAACAATGTAGAGTACTCTATTAGAGCTTTTCCTTTAGGTGGATTTGT
TGGGTTTCCTGATAATGATCCAGAGAGTGGCATTCCTGTTGATGATGAAA
ATTTACTTAAGAATCGGCCAATATTAGATAGGGTCATTGTGATATCAGCT
GGTGTAGTAGCAAATATAGTCTTTGCATTTGTGATAATCTTTACTCAGGT
ATTATCAGTTGGTTTGCCTGTTCAAGATGCCTTTCCCGGGGGTCTTGTGC
CTGAAGTCGAGCCTTTCAGCTGCTCTCGAGATGGATGTTTCC
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