CX295579

Overview
NameCX295579
Unique NameCX295579
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14984 contig Ccv1_Contig14984:265..988. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.297e-51
Identity = 106/228 (46.49%), Postives = 144/228 (63.16%), Query Frame = 2
Query:   20 LARILRLLTSYGVF----SEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 691
            L RILRLL +Y V     +   + G ER Y L  + K L  +A+G+S AP +L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF+G+K +VDVGG  G  L MI+ K+P I +GINF+LP VV +APS  GV H+GGDMF S+P  DAIFMKW+   W+DD C+ +++NCY+ALP  GK+I  E VLP+
Sbjct:   64 LDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTI-KGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPE 289          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.684e-51
Identity = 105/228 (46.05%), Postives = 139/228 (60.96%), Query Frame = 2
Query:   20 LARILRLLTSYGVFSEHREF----GGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 691
            L RILRLLTSY +     +     G ER Y L  + K L  + +G+S AP  L +    LM +W  + +AV+D  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF G+K +VDVGG  G  L MI+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E VLP+
Sbjct:   75 LDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPE 300          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.140e-50
Identity = 106/230 (46.09%), Postives = 139/230 (60.43%), Query Frame = 2
Query:   26 RILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSTRV 706
            R+LRLL SY V     E ++   ER+YS   +GK L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + M   SV     +L+ Y GF+GV  LVDVGG  G  L  I   HP I +GINFDLP V++EAP  PGV H+GGDMFKS+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++  V
Sbjct:   79 RMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQI-KGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAV 306          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.945e-50
Identity = 107/233 (45.92%), Postives = 146/233 (62.66%), Query Frame = 2
Query:   20 LARILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD--DST 700
            L RILRLL SY V +    +  + G ER YSL  + K L  + +G+S A  +L +    LM +W  + +AVL+  I PF K +G  A+ Y+GK P  N +  + MS  S   M  +L+ Y GF+G+K +VDVGG  G  L MI+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P  DAIFMKW+   W+D  C   ++NC++ALP  GK+I  E +LP+  DST
Sbjct:   77 LDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGI-PFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSI-KGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDST 307          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.317e-50
Identity = 105/228 (46.05%), Postives = 138/228 (60.53%), Query Frame = 2
Query:   20 LARILRLLTSYGVFSEHREF----GGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 691
            L RILRLLTSY +     +     G +R Y L  + K L  + +G+S AP  L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF G+K +VDVGG  G  L MI+ K+P I +GINFDLP VV +APS PGV H+GGDMF S+P  DAIFMKW+   W+D  C   ++ CY+ALP  GK+I  E VLP+
Sbjct:   75 LDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSI-KGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENGKVILAECVLPE 300          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.646e-49
Identity = 102/228 (44.74%), Postives = 142/228 (62.28%), Query Frame = 2
Query:   20 LARILRLLTSYGVFS-EHREFGG---ERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 691
            L RILRLLTSY V +  +R+  G   ER Y L  + K L  + +G+S A   L +    LM +W  + +A+LD  I PF K +G  A+ Y+G  P  N +    MS  S   M  +L+ Y GF+G+  LVDVGG  G  L+MI+ K+P + +GINFDLP V+ +APS PG+ H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY++LP  GK+I  E +LP+
Sbjct:   75 LDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGI-PFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNL-KGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPE 300          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.646e-49
Identity = 104/238 (43.70%), Postives = 142/238 (59.66%), Query Frame = 2
Query:   20 LARILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDSTRVRG 712
            L RI RLL SY V +    +  E   ER Y L  + K LV + +G+S AP  L       + +W  + +A+L+  I PF K HG  A+ Y G  P  N +  +AMS  S   M  +L+ Y+GF+G+K +VDVGG  G  L MI+ K+P I +GINFDLP V+ +APS PGV H+GGDMF +IP  DA+FMKW+   W+D+ C  +++NCY ALP  G++I  E   P  PD S   +G
Sbjct:   59 LDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGI-PFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKG 294          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.150e-49
Identity = 105/240 (43.75%), Postives = 142/240 (59.17%), Query Frame = 2
Query:   20 LARILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDSTRVRGRV 718
            L RILRLL SY + +    +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+LD  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P ADA+FMKW+   W+D  C   ++NCY ALP  GK+I  E   PV PD S   +G V
Sbjct:   77 LDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVV 314          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.150e-49
Identity = 105/240 (43.75%), Postives = 144/240 (60.00%), Query Frame = 2
Query:   20 LARILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDSTRVRGRV 718
            L R+LRLL  Y + +      ++   +R Y L  + K LV + +G+S +   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+K LVDVGG  G  +  I+ K+P I +GINFDLP V+ +APS PGV H+GGDMF SIP ADA+FMKW+   W+D+ C   ++NCY+ALP  GK+I  E   PV PD S   +G V
Sbjct:   77 LDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVV 314          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.668e-49
Identity = 103/224 (45.98%), Postives = 133/224 (59.38%), Query Frame = 2
Query:   26 RILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 688
            R+LRLL SY V     E R+   ER+YS   + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G     N +  + M   SV     +LD Y GF+GV  LVDVGG  G  L  I  +HP I  G+NFDLP V++EAP  PGV H+GGDMF S+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP
Sbjct:   81 RMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHI-SGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLP 302          
The following BLAST results are available for this feature:
BLAST of CX295579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
COMT1_COFCA2.297e-5146.49Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_OCIBA6.684e-5146.05Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_SACOF1.140e-5046.09Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_CATRO1.945e-5045.92Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT2_OCIBA3.317e-5046.05Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
OMT1_ARATH1.646e-4944.74Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_EUCGL1.646e-4943.70Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_POPTM2.150e-4943.75Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_MEDSA2.150e-4943.75Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_MAIZE3.668e-4945.98Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]

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Properties
Property NameValue
Genbank descriptionC05073F12SK DroRLeaf1 Citrus clementina cDNA clone C05073F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295579 ID=CX295579; Name=CX295579; organism=Citrus clementina; type=EST; length=723bp
TTCGGCCGAGGGCCGAGAACTTGCACGTATCCTCCGCTTGCTCACCAGCT
ACGGCGTGTTCTCGGAGCATCGCGAGTTTGGAGGCGAAAGGAAGTACAGC
CTCACCGAGATCGGGAAATCCCTCGTTACTGATGCCGAGGGTCTATCGTA
CGCGCCCTACGTGCTCCAGCATCACCAGGACGCGCTTATGAGCGCGTGGC
CTTTGGTGCACGAGGCCGTTCTGGACCCAACTATTGAGCCATTTGTGAAA
GTCCATGGCGAGCCGGCATATAGTTATTATGGGAAGAAGCCTGAAATGAA
CGGCTTGATGCGAAAAGCCATGTCGGGAGTGTCCGTGCCGTTCATGACGT
CCGTTTTGGACGGTTACGATGGGTTCAAAGGTGTGAAGCGATTGGTTGAT
GTGGGTGGGAGTGCAGGTGATTGCCTGAGGATGATATTACAGAAACATCC
TTTTATATGTGAAGGGATCAATTTTGATTTGCCTGAGGTTGTTGCCGAAG
CTCCAAGTATCCCTGGAGTGACCCATATTGGTGGGGACATGTTTAAGTCC
ATTCCTGCCGCTGATGCTATCTTTATGAAGTGGGTTTTAACTACATGGAC
TGACGATGAATGCAAGCTGATAATGGAGAACTGTTACAAGGCTCTTCCGG
CAGGAGGAAAACTGATTGCTTGTGAGCCCGTGCTGCCTGATGATTCAACG
AGAGTCAGAGGACGCGTGCTCTC
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