CX295582

Overview
NameCX295582
Unique NameCX295582
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9346 contig Ccv1_Contig9346:380..1092. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295582 vs. ExPASy Swiss-Prot
Match: DHGY_CUCSA (Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-A PE=2 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 6.204e-110
Identity = 193/234 (82.48%), Postives = 208/234 (88.89%), Query Frame = 3
Query:   12 KYGIAAGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKQEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLAEMKNAIVVPHIASASKWTREGMGTLAALNV 713
            KYG+A GNTPGV                 RRIVEADEFMRAG YDGWLPNLFVGNLLKGQT+GVIGAGRIGSAYARMMVEGFKMNLIY+DLYQ+TRLEKFVTAYG+FLKANGE PVTW+RASSMDEVLREADVISLHPVLDKTT+HL+NKE L  MK++AIL+NCSRGPVIDE ALV+HL+ NPMFRVGLDVFEDEPYMKPGLA+MKNAI+VPHIASASKWTREGM TLAALNV
Sbjct:  107 KYGVAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGRYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVTAYGEFLKANGEAPVTWRRASSMDEVLREADVISLHPVLDKTTFHLVNKESLKAMKKDAILINCSRGPVIDEAALVDHLRDNPMFRVGLDVFEDEPYMKPGLADMKNAIIVPHIASASKWTREGMATLAALNV 340          
BLAST of CX295582 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.359e-39
Identity = 98/239 (41.00%), Postives = 133/239 (55.65%), Query Frame = 3
Query:   12 KYGIAAGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA-YGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKQEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLAEMKNAIVVPHIASASKWTREGMGTLAALNV 713
            K GI   NTPGV                 RRIVEAD F+R+G +     GW P +F+G  LKG+T+G++G GRIG A A+   +GF M +IYY   +    E+ + A Y  F                 + +L+E+D ISLH  L K TYH+I ++ L  MK  AIL+N SRG V+D  AL++ LK+  +   GLDVFE+EPY    L ++KN ++ PHI SA+   REGM  L A N+
Sbjct:   88 KRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKR-AKGFGMKIIYYSRTRKPEAEEEIGAEYVDF-----------------ETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPYYNEELFKLKNVVLAPHIGSATHEAREGMAELVAKNL 308          
BLAST of CX295582 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36
Identity = 92/238 (38.66%), Postives = 128/238 (53.78%), Query Frame = 3
Query:   12 KYGIAAGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKQEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLAEMKNAIVVPHIASASKWTREGMGTLAALNV 713
            K GI   NTPGV                 R +V+ D+F R+G +      W P  F+G  + G+TIG+IG GRIG A A+    GF M ++YY   +   +EK + A                    +DE+LRE+D + L   L+K TYH+IN+ERL  MK+ AIL+N +RG VID  AL++ LK+  +   GLDV+E+EPY    L  + N ++ PHI SA+   REGM  L A N+
Sbjct:   89 KRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKR-ARGFDMRILYYSRTRKPEVEKELNA----------------EFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENL 309          
BLAST of CX295582 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 92/238 (38.66%), Postives = 132/238 (55.46%), Query Frame = 3
Query:   12 KYGIAAGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKQEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLAEMKNAIVVPHIASASKWTREGMGTLAALNV 713
            K G+   NTP V                 RR++EAD+F+R+G +      W P +F+G  + G+TIG++G GRIG A AR   +GF M ++Y    +   +EK + A  +F+               +DE+L+E+D + L   L K TYH+IN+ERL  MK  AILVN +RG V+D  ALV+ L++  +   GLDVFE+EPY    L  + N ++ PHI SA+   REGM  L A N+
Sbjct:   88 KMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARR-AKGFGMRILYNSRTRKPEVEKELGA--EFMP--------------LDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEPYYHEELFSLDNVVLAPHIGSATYGAREGMAELVARNL 308          
BLAST of CX295582 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.011e-35
Identity = 90/238 (37.82%), Postives = 128/238 (53.78%), Query Frame = 3
Query:   12 KYGIAAGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKQEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLAEMKNAIVVPHIASASKWTREGMGTLAALNV 713
            K GI   NTP V                 R +V+ D F+R+G +      W P  F+G  + G+TIG+IG GRIG A A+   +GF M ++YY   +   +E+ + A                    ++++LRE+D + L   L + TYHLIN+ERL  MK+ AIL+N +RG V+D  ALV+ LK+  +   GLDVFE+EPY    L ++ N ++ PHI SAS   REGM  L A N+
Sbjct:   88 KRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKR-AKGFNMRILYYSRTRKEEVERELNA----------------EFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNL 308          
BLAST of CX295582 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.555e-35
Identity = 90/236 (38.14%), Postives = 125/236 (52.97%), Query Frame = 3
Query:   18 GIAAGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKQEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLAEMKNAIVVPHIASASKWTREGMGTLAALNV 713
            GI   NTP V                 RR++EAD F R+G +      W P +F+G+ + G+TIG+IG GRIG A AR   +GF M ++YY   +    E+ + A                    ++E+L+E+D + L   L K TYH+I +  L  MK  AILVN +RG V+D  AL++ LK+  +   GLDVFE+EPY    L  +KN I+ PHI SA+   REGM  L A N+
Sbjct:   90 GIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGKTIGIIGFGRIGQAVARR-AKGFGMRILYYSRTRKPEAEEELKA----------------EFKPLEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPYYNEELFSLKNVILAPHIGSATFGAREGMAELVARNL 308          
BLAST of CX295582 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.555e-35
Identity = 90/236 (38.14%), Postives = 126/236 (53.39%), Query Frame = 3
Query:   18 GIAAGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKQEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLAEMKNAIVVPHIASASKWTREGMGTLAALNV 713
            GI   NTP V                 RR++EAD F R+G +      W P  F+G  + G+TIG++G GRIG A AR    GF M ++YY   +    EK + A                   S++++LRE+D + L   L K T ++IN+ERL  MK+ AILVN +RG V+D  AL++ LK+  +   GLDV+E+EPY    L  +KN ++ PHI SA+   REGM  L A N+
Sbjct:   90 GIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARR-ARGFGMRILYYSRSRKPEAEKELGA----------------EFRSLEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEPYYNEELFSLKNVVLAPHIGSATYGAREGMAELVARNL 308          
BLAST of CX295582 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.562e-35
Identity = 91/237 (38.40%), Postives = 130/237 (54.85%), Query Frame = 3
Query:   12 KYGIAAGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDG-WLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKQEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPG--LAEMKNAIVVPHIASASKWTREGMGTLAALNV 713
            K GI   +TPGV                 RRIVEAD+ +R G +D  W P    G  LKG+TIG++G GRIG A A+ +   F + ++YYD+ +   +E  +                    + +D +L ++D++S+H  L K TYHLIN+ERL  MK+ A L+N +RGPV+D  ALV+ LK+  +    LDVFE EP + P   L +  N ++ PHIASA+   R+ M  LAA N+
Sbjct:   90 KRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRL-SSFDVKILYYDIERRWDVETVIPNM---------------EFTDLDTLLEKSDIVSIHVPLTKETYHLINEERLRKMKKTAYLINTARGPVVDTEALVKALKEGWIAGAALDVFEQEP-LPPNHPLTKFDNVVLAPHIASATIEARQRMAELAARNL 309          
BLAST of CX295582 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.248e-34
Identity = 90/236 (38.14%), Postives = 131/236 (55.51%), Query Frame = 3
Query:   12 KYGIAAGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD-GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKQEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPG-LAEMKNAIVVPHIASASKWTREGMGTLAALNV 713
            K GI   NTPGV                 RR+VEAD ++R G +   W P + +G  + G+T+G++G GRIG+A AR   +GF M ++YYD  +    EK +          G + V       ++++L E+D +SLH  L + TYH+I +E+L  MK+ AILVN SRG V+D+ AL + LK+  +   GLDVFE EP      L +++N ++ PH ASAS  TR  M  + A N+
Sbjct:   88 KRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVARR-AKGFGMRILYYDSIRREDFEKEL----------GVEYVP------LEKLLEESDFVSLHVPLTEETYHMIGEEQLRRMKRTAILVNTSRGKVVDQKALYKALKEGWIAGAGLDVFEQEPIPPDDPLLKLENVVLAPHAASASHETRSRMAEMVAENL 306          
BLAST of CX295582 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.236e-33
Identity = 88/236 (37.29%), Postives = 125/236 (52.97%), Query Frame = 3
Query:   18 GIAAGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKQEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLAEMKNAIVVPHIASASKWTREGMGTLAALNV 713
            GI   NTP V                 R +V+ D+F+R+G +      W P  F+G  L G+TIG++G GRIG A AR   +GF M ++YY   + ++ EK + A                    ++EVL+E+D + L   L K T ++IN+ERL  MK  AILVN +RG V+D  AL++ LK+  +   GLDVFE+EPY    L  + N ++ PHI SA+   RE M  L A N+
Sbjct:   90 GIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARR-AKGFNMRILYYSRTRKSQAEKELGA----------------EYRPLEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPYYNEELFSLDNVVLTPHIGSATFEAREAMAELVARNL 308          
The following BLAST results are available for this feature:
BLAST of CX295582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
DHGY_CUCSA6.204e-11082.48Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-... [more]
GYAR_THELI3.359e-3941.00Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_PYRAB1.195e-3638.66Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_THEON7.744e-3638.66Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_PYRHO1.011e-3537.82Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_THEGJ6.555e-3538.14Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_PYRKO6.555e-3538.14Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_THEPD8.562e-3538.40Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_KORCO7.248e-3438.14Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]
GYAR_PYRFU1.236e-3337.29Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]

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Properties
Property NameValue
Genbank descriptionC05073G03SK DroRLeaf1 Citrus clementina cDNA clone C05073G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295582 ID=CX295582; Name=CX295582; organism=Citrus clementina; type=EST; length=713bp
AATGCTGCTAAAAATATGGTATTGCTGCTGGAAACACTCCTGGAGTACTT
ACAGAAACAACAGCAGAGTTAGCAGCTTCGCTCTCTCTAGCGGCTGCAAG
AAGAATTGTTGAAGCAGATGAGTTTATGAGAGCTGGCTTATACGATGGAT
GGCTTCCAAATCTGTTCGTTGGGAACTTGCTCAAGGGACAGACTATTGGT
GTGATTGGAGCTGGTCGTATAGGATCTGCCTATGCTAGAATGATGGTTGA
AGGGTTCAAAATGAACCTCATTTACTATGATCTTTACCAAGCTACACGCT
TGGAAAAGTTTGTCACAGCTTATGGTCAGTTTCTAAAAGCCAATGGTGAA
CAACCTGTCACTTGGAAAAGAGCCTCGTCCATGGATGAGGTGCTTCGAGA
AGCAGATGTGATAAGTCTTCATCCAGTCTTGGATAAAACCACTTACCATT
TGATCAACAAAGAAAGGCTTGCAACGATGAAGCAGGAAGCGATTCTTGTC
AACTGCAGTAGGGGTCCCGTGATTGATGAAGTAGCTCTGGTGGAGCATTT
GAAACAAAATCCAATGTTTCGTGTCGGTCTTGATGTCTTTGAGGATGAGC
CTTACATGAAGCCTGGCCTCGCTGAAATGAAGAACGCCATCGTGGTACCT
CACATTGCTTCCGCATCCAAGTGGACTCGTGAAGGAATGGGCACCCTTGC
TGCTCTGAATGTC
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