CX295586
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295586 vs. ExPASy Swiss-Prot
Match: AROK_ARATH (Shikimate kinase, chloroplastic OS=Arabidopsis thaliana GN=At2g21940 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 2.001e-11 Identity = 44/141 (31.21%), Postives = 70/141 (49.65%), Query Frame = 1 Query: 1 SAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARM-------------DHSGFPESELF----ALYKEMRDGYATADATVSLQKVASQLGYDDLDAVTTEDMTLEVLRR 372 S A+ F E ++ ET+ LK+LSS ++VV G GAV N + GIS+W+DVP +A D SG S F A++ E + Y A+A VSL+ +A++ GY ++ +T ++ +E + Sbjct: 145 SVAEIFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQ 285
BLAST of CX295586 vs. ExPASy Swiss-Prot
Match: AROK_SYNP6 (Shikimate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=aroK PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.604e-11 Identity = 36/107 (33.64%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 1 SAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMD--------HSGFPESELFALYKEMRDGYATADATVSLQ 294 S + F E G++Q ET+VL++++S RLVV G G V N + L+ G+ +W+DVP P ++ R++ + P + L AL+++ RD YA AD ++++ Sbjct: 51 SIPEIFASDGEAGFRQIETQVLEEVASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLEGDQNRPLLQTEAPATTLQALWEQRRDRYAQADLRIAIE 157
BLAST of CX295586 vs. ExPASy Swiss-Prot
Match: AROK_SYNE7 (Shikimate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=aroK PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.604e-11 Identity = 36/107 (33.64%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 1 SAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARMD--------HSGFPESELFALYKEMRDGYATADATVSLQ 294 S + F E G++Q ET+VL++++S RLVV G G V N + L+ G+ +W+DVP P ++ R++ + P + L AL+++ RD YA AD ++++ Sbjct: 51 SIPEIFASDGEAGFRQIETQVLEEVASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLEGDQNRPLLQTEAPATTLQALWEQRRDRYAQADLRIAIE 157 The following BLAST results are available for this feature:
BLAST of CX295586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295586 ID=CX295586; Name=CX295586; organism=Citrus clementina; type=EST; length=377bpback to top |