CX295595

Overview
NameCX295595
Unique NameCX295595
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX295595_ssr124 microsatellite CX295595_ssr124:124..135. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig6450 contig Ccv1_Contig6450:4..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295595 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.039e-68
Identity = 120/151 (79.47%), Postives = 132/151 (87.42%), Query Frame = 3
Query:  219 DDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAY 671
            DD YADLDWDNLGF + PADYMY MKCSK   F QG+LS Y NI+LSPSA VLNYGQ +YEGTKAYR E+G++LLFRPD NA RMK+GAERM MPSPSVDQFV+AVKQ ALANKRWVPP GKGTLYIRPLL+GSGP+LGLGPAPEYTF+ Y
Sbjct:   50 DDVYADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVY 200          
BLAST of CX295595 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.901e-58
Identity = 114/201 (56.72%), Postives = 144/201 (71.64%), Query Frame = 3
Query:   93 LRNLIHLFRPPSSSLTSKLGAC------YFCTSHVASLQQPGKPSVFSDD--EYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAY 671
            L +L  L   PSSSL  ++  C       F  S V+  ++    S  + D  E A++DWD + F +KP DYMY MKCS+   F QGQL  + NI+++P+A VLNYGQG++EG KAYR +DG ILLFRP+ NA RM+ GAERMCMPSP+V+QFV+AVK   LANKRW+PPPGKG+LYIRPLL+G+G VLGL PAPEYTFL +
Sbjct:   28 LHSLSSLRNFPSSSL--RIRHCPSPISSNFIVSEVSRNRRCDAVSSSTTDVTELAEIDWDKIDFGLKPTDYMYAMKCSRDGEFSQGQLQPFGNIDINPAAGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTVLANKRWIPPPGKGSLYIRPLLMGTGAVLGLAPAPEYTFLIF 226          
BLAST of CX295595 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.789e-58
Identity = 102/150 (68.00%), Postives = 125/150 (83.33%), Query Frame = 3
Query:  225 EYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGR-ILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAY 671
            E AD+DWD +GF +KPADYMY MKC+    F +G+L R+ NIE+SPSA VLNYGQG++EG KAYR +DG  ILLFRP+ NA RM+ GAERMCMP+P+V+QFV+AV +  LANKRWVPPPGKG+LY+RPLL+G+G VLGL PAPEYTF+ Y
Sbjct:   75 ELADIDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFEGLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPPGKGSLYVRPLLMGTGAVLGLAPAPEYTFIIY 224          
BLAST of CX295595 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 3.789e-58
Identity = 112/194 (57.73%), Postives = 139/194 (71.65%), Query Frame = 3
Query:   93 LRNLIHLFRPPSSSLTSKLGACYFCTSHVASL-QQPGKPSVFSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAY 671
            LR  +  +   SS L+   G     T   AS+ ++    +   D+EYAD+DWDNLGFS+   D+M+  K  +  NF+QG LSRY NIEL+P+A +LNYGQG+ EG KAYR EDGR+LLFRP+LNA RMKIGAERMCM SPSV QF++ VKQ  LAN+RWVPPPGKG+LY+RPLL GSG  LG+  A EYTFL +
Sbjct:    3 LRRCLPQYSTTSSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDNLGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGKGSLYLRPLLFGSGASLGVAAASEYTFLVF 196          
BLAST of CX295595 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.032e-55
Identity = 97/165 (58.79%), Postives = 128/165 (77.58%), Query Frame = 3
Query:  177 VASLQQPGKPSVFSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAY 671
            +A    P + +  +D++YA++ W+ LGF++ P DYMY  KC + E+F QG++  Y +I +SP + +LNYGQG++EG KAYRTED RI +FRPD NA RM+ GAER+CM  P+++QFV+AVKQ  LANK+WVPPPGKGTLYIRPLL+GSG  LG+ PAPEYTFL Y
Sbjct:    1 MAPSSSPLRTTSETDEKYANVKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLLGSGATLGVAPAPEYTFLIY 165          
BLAST of CX295595 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.921e-55
Identity = 96/152 (63.16%), Postives = 120/152 (78.95%), Query Frame = 3
Query:  216 SDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAY 671
            +D++YA++ WD LGF++ P DYMY  KC + E+F  G++  Y +I +SP A +LNYGQG++EG KAYRTEDGRI LFRPD NA RM+ GA+R+CM  PS +QFV+AVKQ  LAN +WVPPPGKG LYIRPLLIG+G VLG+  APEYTFL Y
Sbjct:   17 ADEKYANVKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANNKWVPPPGKGALYIRPLLIGTGAVLGVASAPEYTFLIY 168          
BLAST of CX295595 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.542e-54
Identity = 95/156 (60.90%), Postives = 123/156 (78.85%), Query Frame = 3
Query:  204 PSVFSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAY 671
            P   SD++YA++ W+ L F     DYMY  KC+  E+F++G++  +A+++L+P AAVL YGQG+YEG KAYRTEDGRILLFRPD N  R++ GA+R+ MP PSVDQFV A+KQ+ALANK+W+PPPGKGTLYIRP+L GSGP+LG  P PE TF A+
Sbjct:    9 PVSVSDEKYANVKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQYGQGLYEGLKAYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALANKKWIPPPGKGTLYIRPILFGSGPILGSFPIPETTFTAF 164          
BLAST of CX295595 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.518e-27
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 3
Query:  234 DLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKG-TLYIRPLLIGSGPVLGLGPAPEYTFLAY 671
            DLDW+NLGFS    DY +     K   + +G+L+  + + +   +  L+YGQ  +EG KAYR +DG I LFRP  NA RM+  A+R+ MP    + FV A K++  AN+ W+ P G G TLY+RP LIG G  +G+  APE+ F  +
Sbjct:    3 DLDWNNLGFSYIKTDYRFIAHW-KDGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKAYRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKANQDWLGPYGSGATLYLRPFLIGVGENIGVKTAPEFIFSVF 148          
BLAST of CX295595 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26
Identity = 61/147 (41.50%), Postives = 93/147 (63.27%), Query Frame = 3
Query:  234 DLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKG-TLYIRPLLIGSGPVLGLGPAPEYTFLAY 671
            +LDW NLGFS    D+ + +   K+ ++ QG+L     ++LS  + VL+YGQ  +EG KAYR++ G+ LLFRP  NA R++   ER+ MP  S + F+ A  ++  AN++W+ P   G +LY+RP +IG G  LG+ PA EY F+ +
Sbjct:    6 NLDWKNLGFSYIKTDFRF-IATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPASEYLFIVF 151          
BLAST of CX295595 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.995e-26
Identity = 61/147 (41.50%), Postives = 92/147 (62.59%), Query Frame = 3
Query:  234 DLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKG-TLYIRPLLIGSGPVLGLGPAPEYTFLAY 671
            +LDW NLGFS    D+ + +   K+ ++ QG L     ++LS  + VL+YGQ  +EG KAYR++ G+ LLFRP  NA R++   ER+ MP  S + F+ A  ++  AN++W+ P   G +LY+RP +IG G  LG+ PA EY F+ +
Sbjct:    6 NLDWKNLGFSYIKTDFRF-IATYKNGSWSQGGLVSENMLQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPANEYLFIVF 151          
The following BLAST results are available for this feature:
BLAST of CX295595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
BCAT2_ARATH4.039e-6879.47Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT5_ARATH2.901e-5856.72Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT3_ARATH3.789e-5868.00Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT1_ARATH3.789e-5857.73Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT6_ARATH1.032e-5558.79Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT7_ARATH3.921e-5563.16Putative branched-chain-amino-acid aminotransferas... [more]
BCAT4_ARATH2.542e-5460.90Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_HAEIN4.518e-2742.86Branched-chain-amino-acid aminotransferase OS=Haem... [more]
ILVE_HELPJ1.315e-2641.50Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HELPY4.995e-2641.50Branched-chain-amino-acid aminotransferase OS=Heli... [more]

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Properties
Property NameValue
Genbank descriptionC05073H04SK DroRLeaf1 Citrus clementina cDNA clone C05073H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295595 ID=CX295595; Name=CX295595; organism=Citrus clementina; type=EST; length=672bp
AGGCTTCTCGGTTATTAACTCTGCCAAAAGTCGTGAACACTGTTGCAAAT
AACAACACAAGAATCATGATTCTAAAGGATGGTGCTGCATGCCTCCGCAA
TTTGATCCACTTATTTCGACCTCCTTCTTCTTCTTTGACGTCCAAGCTTG
GAGCTTGCTATTTCTGTACATCTCATGTTGCCTCTCTGCAACAACCGGGC
AAACCCTCTGTTTTCAGTGATGATGAGTACGCTGATTTGGACTGGGATAA
TCTTGGATTTAGTATCAAGCCAGCTGATTATATGTACACCATGAAATGTT
CTAAACACGAAAATTTCAAACAAGGACAGCTTAGTCGGTACGCAAACATT
GAGCTAAGCCCTTCAGCAGCAGTCTTAAATTATGGACAGGGAGTGTACGA
AGGAACAAAAGCATACAGGACAGAAGATGGGCGTATTCTTCTCTTCCGGC
CAGATCTAAATGCTTCCCGTATGAAGATAGGTGCCGAGAGGATGTGCATG
CCGTCACCCTCCGTTGATCAGTTTGTCGACGCTGTGAAACAAATAGCTCT
TGCTAACAAGCGTTGGGTTCCTCCTCCAGGAAAAGGCACACTGTACATCA
GGCCATTGCTCATAGGAAGCGGCCCTGTGTTGGGTTTGGGTCCAGCACCT
GAATACACTTTCCTCGCATATG
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