CX295600

Overview
NameCX295600
Unique NameCX295600
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9480 contig Ccv1_Contig9480:44..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295600 vs. ExPASy Swiss-Prot
Match: E134_MAIZE (Endo-1,3;1,4-beta-D-glucanase OS=Zea mays PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.631e-35
Identity = 82/194 (42.27%), Postives = 116/194 (59.79%), Query Frame = 1
Query:   49 SQCFENPPKLSPGSG--CGAGTVQQ--LGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEIL 618
            SQC +NPP  S        AG V     GGL  YV+G+    S  A++L SDVFGYEAPL R++ DKVA AG+ VV PDF  GD + D  N       W + H+  K   DAK + AALK +G S +   G+CWGG ++ ++  + D++A  + HP ++T DD+ E+K P+ ILGA+ D  +PP+++ RF  +L
Sbjct:   27 SQCLDNPPDRSIHGRQLAEAGEVVHDLPGGLRAYVSGAA--SSSRAVVLASDVFGYEAPLLRQIVDKVAKAGYFVVVPDFLKGDYLDDKKN----FTEWLEAHSPVKAAEDAKPLFAALKKEGKS-VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVL 213          
BLAST of CX295600 vs. ExPASy Swiss-Prot
Match: CMBL_MOUSE (Carboxymethylenebutenolidase homolog OS=Mus musculus GN=Cmbl PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19
Identity = 64/200 (32.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query:   97 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCL----VKIYPRVSHGW 678
            G G   Q+  +  YVT S P D+  A++++ D+FG++ P  R +AD +A  G+  + PDFF G    D         AW K  N  K   +  +V+  L+ +     IG  GFCWGGVV  ++ +++ DI+A V ++      +D+  +K P   + AE D V P E +      L+ KLK  C+    VK +   +HG+
Sbjct:   20 GMGHEVQVEHIKAYVTRS-PVDAGKAVIVVQDIFGWQLPNTRYMADMIARNGYTTIVPDFFVGQEPWDPAGDWSTFPAWLKSRNARKVNREVDAVLRYLRQQCHAQKIGIVGFCWGGVVVHQVMTAYPDIRAGVSVYGIIRDSEDVYNLKNPTLFIFAENDTVIPLEQV----STLTQKLKEHCIVNYQVKTFSGQTHGF 214          
BLAST of CX295600 vs. ExPASy Swiss-Prot
Match: CMBL_PONAB (Carboxymethylenebutenolidase homolog OS=Pongo abelii GN=CMBL PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18
Identity = 62/200 (31.00%), Postives = 98/200 (49.00%), Query Frame = 1
Query:   97 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLV----KIYPRVSHGW 678
            G G   Q+  +  YVT S P D+  A+++I D+FG++ P  R +AD ++G G+  + PDFF G    D +        W K  N  K   +  +++  LK +     IG  GFCWGG+    L   + + +A V ++      +DI  +K P   + AE D V P +D+     +L+ KLK  C V    K +   +HG+
Sbjct:   20 GLGREVQVEHIKAYVTKS-PVDAGKAVIVIQDIFGWQLPNTRYMADMISGNGYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHAQKIGIVGFCWGGIAVHHLMMKYSEFRAGVSVYGIVKDSEDIYNLKNPTLFIFAENDVVIPLKDV----SLLTQKLKEHCKVEYQIKTFSGQTHGF 214          
BLAST of CX295600 vs. ExPASy Swiss-Prot
Match: CMBL_RAT (Carboxymethylenebutenolidase homolog OS=Rattus norvegicus GN=Cmbl PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18
Identity = 62/200 (31.00%), Postives = 99/200 (49.50%), Query Frame = 1
Query:   97 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCL----VKIYPRVSHGW 678
            G G   Q+  +  YVT S P D+  A++++ D+FG++    R +AD +AG G+  + PDFF G    D          W K  N  K   +  +V+  LK +     IG  GFCWGG+V   + +++ +++A V ++      +D+  +K P   + AE D V P E +     IL  KLK  C+    VK +   +HG+
Sbjct:   20 GMGQEVQVEHIKAYVTRS-PVDAGKAVIVVQDIFGWQLSNTRYMADMIAGNGYTTIVPDFFVGQEPWDPAGDWSTFPEWLKSRNARKINREVDAVLRYLKQQCHAQKIGIVGFCWGGIVVHHVMTTYPEVRAGVSVYGIIRDSEDVYNLKNPTLFIFAENDAVIPLEQV----SILIQKLKEHCIVNYQVKTFSGQTHGF 214          
BLAST of CX295600 vs. ExPASy Swiss-Prot
Match: CMBL_XENTR (Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18
Identity = 58/194 (29.90%), Postives = 94/194 (48.45%), Query Frame = 1
Query:  103 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGW 678
            G   Q+  +  YV+       K A++++ D+FG++ P  R +AD +   G++ + PDFF G      +N +     W +     K   +   V+  LK +  V  IG  GFCWGGVV   L   + +++A V  +     V+D   +  P   + AE+DHV P E +    E L    K D  VK++P+ +HG+
Sbjct:   22 GQEVQIEHIKAYVSKPHSSTDK-AVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFFVGQEPWKPSNDRSTFTEWLQTRQATKVEKEINVVLKYLKEQCHVKKIGVIGFCWGGVVTHHLMLKYPELKAGVSFYGIIRDVEDRYNLLNPTLFIFAEMDHVIPLEQVSLLEEKLKVHSKVDFQVKVFPKQTHGF 214          
BLAST of CX295600 vs. ExPASy Swiss-Prot
Match: CMBL_HUMAN (Carboxymethylenebutenolidase homolog OS=Homo sapiens GN=CMBL PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.309e-18
Identity = 62/200 (31.00%), Postives = 97/200 (48.50%), Query Frame = 1
Query:   97 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLV----KIYPRVSHGW 678
            G G   Q+  +  YVT S P D+  A+++I D+FG++ P  R +AD ++G G+  + PDFF G    D +        W K  N  K   +  +++  LK +     IG  GFCWGG     L   + + +A V ++      +DI  +K P   + AE D V P +D+     +L+ KLK  C V    K +   +HG+
Sbjct:   20 GLGREVQVEHIKAYVTKS-PVDAGKAVIVIQDIFGWQLPNTRYIADMISGNGYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHAQKIGIVGFCWGGTAVHHLMMKYSEFRAGVSVYGIVKDSEDIYNLKNPTLFIFAENDVVIPLKDV----SLLTQKLKEHCKVEYQIKTFSGQTHGF 214          
BLAST of CX295600 vs. ExPASy Swiss-Prot
Match: CMBL_XENLA (Carboxymethylenebutenolidase homolog OS=Xenopus laevis GN=cmbl PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.143e-18
Identity = 56/190 (29.47%), Postives = 92/190 (48.42%), Query Frame = 1
Query:  115 QLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGW 678
            Q+  +  YV+       K A++++ D+FG++ P  R +AD +   G++ + PDFF G      +N       W +     K   +   V+  LK +  V  IG  GFCWGGVV   L   + +++A V  +     V+D   +  P   + AEIDHV P E +    + L    K D  +K++P+ +HG+
Sbjct:   26 QIEHIKAYVSKPHSSTDK-AVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFFVGQESWKPSNDWSTFTEWLQTRQATKVEKEMNVVLKYLKEQCHVKKIGVIGFCWGGVVTHHLMLKYPELKAGVSFYGIIRDVEDRYNLLNPTLFIFAEIDHVIPLEQVSLLEQKLKVHSKVDFQIKVFPKQTHGF 214          
BLAST of CX295600 vs. ExPASy Swiss-Prot
Match: AIM2_YEAST (Protein AIM2 OS=Saccharomyces cerevisiae GN=AIM2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17
Identity = 67/223 (30.04%), Postives = 107/223 (47.98%), Query Frame = 1
Query:   37 NMSGSQCFENPPKLSPGSGCGAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTD--KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHD--IQAAVVLHPGAITVDDINEI--KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKND---CLVKIYPRVSHGW 678
            N  G  CFE         G   G  +++ GL+TY  GS  P  K  I++++DV+G +       ADK A AG++V  PD  +GD I   ++   DR+AW + H+ +  K  VD    +  L+      IG  G+C+G   A +  S       AA + HP  +++++I  I  K P+ I  AE DH+ P         +   KLK++     + ++  V+HG+
Sbjct:    4 NQPGKCCFEGVCH----DGTPKGRREEIFGLDTYAAGSTSPKEK-VIVILTDVYGNKFNNVLLTADKFASAGYMVFVPDILFGDAI--SSDKPIDRDAWFQRHSPEVTKKIVDGFMKLLKLE-YDPKFIGVVGYCFGAKFAVQHISGDGGLANAAAIAHPSFVSIEEIEAIDSKKPILISAAEEDHIFP----ANLRHLTEEKLKDNHATYQLDLFSGVAHGF 214          
The following BLAST results are available for this feature:
BLAST of CX295600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
E134_MAIZE4.631e-3542.27Endo-1,3;1,4-beta-D-glucanase OS=Zea mays PE=1 SV=... [more]
CMBL_MOUSE1.599e-1932.00Carboxymethylenebutenolidase homolog OS=Mus muscul... [more]
CMBL_PONAB1.036e-1831.00Carboxymethylenebutenolidase homolog OS=Pongo abel... [more]
CMBL_RAT1.354e-1831.00Carboxymethylenebutenolidase homolog OS=Rattus nor... [more]
CMBL_XENTR1.768e-1829.90Carboxymethylenebutenolidase homolog OS=Xenopus tr... [more]
CMBL_HUMAN2.309e-1831.00Carboxymethylenebutenolidase homolog OS=Homo sapie... [more]
CMBL_XENLA5.143e-1829.47Carboxymethylenebutenolidase homolog OS=Xenopus la... [more]
AIM2_YEAST7.427e-1730.04Protein AIM2 OS=Saccharomyces cerevisiae GN=AIM2 P... [more]
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Properties
Property NameValue
Genbank descriptionC05073H09SK DroRLeaf1 Citrus clementina cDNA clone C05073H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295600 ID=CX295600; Name=CX295600; organism=Citrus clementina; type=EST; length=679bp
GTAATACAGTTAATTCCATTATCGAATTTGGGTTTGAATATGTCAGGCTC
ACAGTGCTTTGAGAACCCACCAAAGCTGAGCCCGGGTTCGGGTTGTGGAG
CTGGGACTGTACAGCAACTCGGTGGCCTCAACACTTATGTGACCGGGTCT
GGTCCTCCAGATTCCAAGTCTGCTATTCTTCTCATTTCTGACGTTTTTGG
GTATGAAGCTCCTCTTTTCAGGAAACTTGCCGACAAAGTTGCCGGTGCTG
GATTCTTAGTTGTGGCTCCTGATTTCTTTTATGGCGACCCTATTGTTGAT
CTGAACAACCCTCAGTTTGATCGAGAGGCCTGGAGAAAAATTCATAACAC
GGACAAAGGTTATGTAGATGCCAAATCAGTAATTGCTGCTTTGAAAAGTA
AAGGTGTATCTGCCATAGGGGCAGCAGGTTTTTGCTGGGGAGGCGTTGTA
GCTGCAAAATTGGCAAGTTCTCATGATATTCAGGCTGCTGTTGTGTTGCA
TCCTGGTGCCATCACAGTCGATGATATAAATGAGATTAAAGTTCCAGTTG
CTATTTTGGGAGCTGAGATTGATCACGTTTCCCCACCAGAAGATCTGAAA
CGTTTTGGAGAAATATTATCTGCAAAACTGAAGAATGACTGCCTTGTGAA
AATATACCCTCGTGTATCTCATGGATGGA
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