CX295636

Overview
NameCX295636
Unique NameCX295636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length759
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX295636_ssr740 microsatellite CX295636_ssr740:740..753. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig11476 contig Ccv1_Contig11476:656..1414. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C24_ARATH (Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.293e-71
Identity = 137/211 (64.93%), Postives = 153/211 (72.51%), Query Frame = 1
Query:   25 KWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALAR 657
            +WK TM+ SF +MDKEV  W  S   +NC+C+LQTP CD+VGS        P K++V+NCGDSRAVLCRNG  VPLS DHKPDRPDEL RIE AGGRVIYWD PRVLGVLAMSRAIGDNYLKPYV  EPEVT+T+R  +D+CLILASDGLWDVVSNETACSV R C R                        SDKAC +AS+LLTKLALAR
Sbjct:  149 EWKTTMERSFTRMDKEVVSWGDSVVTANCKCDLQTPACDSVGSTAVVSVITPDKIVVANCGDSRAVLCRNGKPVPLSTDHKPDRPDELDRIEGAGGRVIYWDCPRVLGVLAMSRAIGDNYLKPYVSCEPEVTITDR-RDDDCLILASDGLWDVVSNETACSVARMCLRG-----------GGRRQDNEDPAISDKACTEASVLLTKLALAR 347          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.880e-71
Identity = 140/222 (63.06%), Postives = 158/222 (71.17%), Query Frame = 1
Query:   19 SVKWKQTMQASFGKMDKEVQ--------DWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALARR 660
            S +W +TM  SF KMDKEV         + +  S  ++CRCELQ+PQCDAVGS        P K+IVSNCGDSRAVLCRNGVA+PLS DHKPDRPDEL+RI+ AGGRVIYWDG RVLGVLAMSRAIGDNYLKPYVI +PEVTVT+RT EDECLILASDGLWDVV NETAC V R C R                       ++  AC DA++LLTKLALAR+
Sbjct:  170 SDEWTETMVKSFQKMDKEVSQRECNLVVNGATRSMKNSCRCELQSPQCDAVGSTAVVSVVTPEKIIVSNCGDSRAVLCRNGVAIPLSVDHKPDRPDELIRIQQAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVIPDPEVTVTDRTDEDECLILASDGLWDVVPNETACGVARMCLRG--------------AGAGDDSDAAHNACSDAALLLTKLALARQ 377          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.912e-71
Identity = 137/229 (59.83%), Postives = 159/229 (69.43%), Query Frame = 1
Query:   25 KWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCF------------------RAQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALAR 657
            +WK+ M+ SF +MDKEV  W  +   +NCRCELQTP CDAVGS        P K+IV+NCGDSRAVLCRNG AVPLS DHKPDRPDEL RI+ AGGRVIYWDG RVLGVLAMSRAIGDNYLKPYV SEPEVTVT+RT EDE LILA+DGLWDVV+NE AC++VR C                   R+++                   + +DKAC +AS+LLTKLALA+
Sbjct:  192 EWKKMMERSFTRMDKEVVRWGETVMSANCRCELQTPDCDAVGSTAVVSVITPEKIIVANCGDSRAVLCRNGKAVPLSTDHKPDRPDELDRIQEAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVTSEPEVTVTDRTEEDEFLILATDGLWDVVTNEAACTMVRMCLNRKSGRGRRRGETQTPGRRSEEEGKEEEEKVVGSRKNGKRGEITDKACTEASVLLTKLALAK 420          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C78_ARATH (Probable protein phosphatase 2C 78 OS=Arabidopsis thaliana GN=At5g59220 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.303e-67
Identity = 134/217 (61.75%), Postives = 152/217 (70.05%), Query Frame = 1
Query:   28 WKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQ------KXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALARR 660
            W+++M  SF +MD EV   +     + CRCELQ P CDAVGS        P K+IV+NCGDSRAVLCRNG A+ LS+DHKPDRPDEL RI+AAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVIS PEVTVT+R   D+ LILASDGLWDVVSNETACSVVR C R +                             DKAC +AS+LLT+LALAR+
Sbjct:  182 WEKSMARSFTRMDMEVVALNADGA-AKCRCELQRPDCDAVGSTAVVSVLTPEKIIVANCGDSRAVLCRNGKAIALSSDHKPDRPDELDRIQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISRPEVTVTDRANGDDFLILASDGLWDVVSNETACSVVRMCLRGKVNGQVSSSPEREMTGVGAGNVVVGGGDLPDKACEEASLLLTRLALARQ 397          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C49_ORYSJ (Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.027e-65
Identity = 134/230 (58.26%), Postives = 149/230 (64.78%), Query Frame = 1
Query:   28 WKQTMQASFGKMDKEVQDWSVSSKISN--CRCELQTP-QCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQS----------------SDKACLDASILLTKLALARR 660
            WK  M+  F +MD E   W+ S       CRCELQTP +CD VGS        P +++V+N GDSRAVLCR GV VPLS DHKPDRPDEL RI+AAGGRVIYWDG RVLGVLAMSRAIGD YLKPYV SEPEVTVTER  +DECLILASDGLWDVV+NE AC VVR CFR+                      S                SDKAC DA++LL KLA+ARR
Sbjct:  170 WKDVMEKGFARMDDEATIWAKSRTGGEPACRCELQTPARCDHVGSTAVVAVVGPNRVVVANSGDSRAVLCRAGVPVPLSVDHKPDRPDELERIKAAGGRVIYWDGARVLGVLAMSRAIGDGYLKPYVTSEPEVTVTERADDDECLILASDGLWDVVTNEMACEVVRACFRSNGPPSPPGCSRPKAVLPPPAGASGGGGGDAVVKGVDKAESDKACADAALLLAKLAIARR 399          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.901e-60
Identity = 130/233 (55.79%), Postives = 148/233 (63.52%), Query Frame = 1
Query:   16 ESVKWKQTMQASFGKMDKEVQDWSVSSKISN--CRCELQTP-QCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFR---------------AQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALARR 660
            E   W+  M+ SF +MD EV + + +       C CE QTP + D  GS        P +++V+N GDSRAV+ R GV V LS DHKPDRPDEL RIEAAGGRVIYWDG RVLGVLAMSRAIGD YLKPYV SEPEVTVTERT +DECLILASDGLWDVV+NE AC VVR CF                +                     +SSDKAC DA++LLTKLALARR
Sbjct:  166 EVAPWRDVMEKSFARMDGEVGNRASTRSDDEPACPCEQQTPSRRDHAGSTAVVAVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGDGYLKPYVTSEPEVTVTERTDDDECLILASDGLWDVVTNEMACEVVRACFHNNGPPAPAARPSGVPSSAEAAETENGGAASVKGISKAESSDKACSDAAMLLTKLALARR 398          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C30_ORYSJ (Probable protein phosphatase 2C 30 OS=Oryza sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.528e-59
Identity = 126/243 (51.85%), Postives = 146/243 (60.08%), Query Frame = 1
Query:   16 ESVKWKQTMQASFGKMDKEVQDWSVSS--KISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTER-TAEDECLILASDGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQS-------------------------SDKACLDASILLTKLALARR 660
            E  +W+  M+ SF +MD E    S  S      CRCE+Q P+CD VGS        P  ++V+NCGDSRAVLCR G A+PLS DHKPDRPDEL RI AAGGRVI+WDG RV G+LAMSRAIGD+YLKPYVI +PEV V ER   EDE LILASDGLWDVVSNE AC+VVR C R+                      S                          DKAC +A++LLTKLALAR+
Sbjct:  145 EEARWRGVMERSFARMDAEAVASSRGSVAPAPTCRCEMQLPKCDHVGSTAVVAVLGPRHVVVANCGDSRAVLCRGGAAIPLSCDHKPDRPDELERIHAAGGRVIFWDGARVFGMLAMSRAIGDSYLKPYVICDPEVRVMERKDGEDEFLILASDGLWDVVSNEVACNVVRACLRSSGRRERNRSSPTSNLSPRQSSSSGDEAPNDGAPSAAAGSESDEESAAEEDKACAEAAVLLTKLALARQ 387          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.367e-57
Identity = 119/216 (55.09%), Postives = 143/216 (66.20%), Query Frame = 1
Query:   13 RESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALARR 660
            RE   W +TM+ SF +MD EV      ++  +CRCE Q  +CD VGS          +++V+NCGDSRAVLCR G  V LS+DHKPDRPDEL RIEAAGGRVI+W+G RVLGVLAMSR+IGD YLKPYV + PEVTVT R+  DECLILASDGLWDVVSNE AC V ++C R                      +   + C +A+ +LTKLALARR
Sbjct:  150 REPASWTETMERSFARMDAEVIA-GCRAESGSCRCEGQ--KCDHVGSTAVVAVVEESRVVVANCGDSRAVLCRGGAPVQLSSDHKPDRPDELERIEAAGGRVIFWEGARVLGVLAMSRSIGDAYLKPYVTAVPEVTVTGRSDFDECLILASDGLWDVVSNEAACEVAQSCLR----------------------RGRQRWCAEAAAVLTKLALARR 340          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C08_ORYSJ (Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.177e-48
Identity = 106/218 (48.62%), Postives = 133/218 (61.01%), Query Frame = 1
Query:    4 IRPRESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALAR 657
            +   +  +WK+ M A F ++D EV              E  T +   VGS        P +++V+NCGDSRAVL R GVAVPLS+DHKPDRPDE+ R+EAAGGRVI W+G R+LGVLA SR+IGD YLKPYVI+EPEVTV +RT +DE LILASDGLWDVVSN+ AC + R C   +                      S     DA+ LL +LA++R
Sbjct:  182 VEDEDRARWKEAMAACFTRVDGEVGGAE----------EADTGE-QTVGSTAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDHKPDRPDEMERVEAAGGRVINWNGYRILGVLATSRSIGDYYLKPYVIAEPEVTVMDRTDKDEFLILASDGLWDVVSNDVACKIARNCLSGR-------------AASKYPESVSGSTAADAAALLVELAISR 375          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.631e-48
Identity = 109/213 (51.17%), Postives = 132/213 (61.97%), Query Frame = 1
Query:   22 VKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQ-CDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALAR 657
            V+WK+ M ASF +MD EV     S   +  R +   P     VGS          +++V+NCGDSRAVL R GVA+PLS DHKPDRPDEL R+EAAGGRVI W+G RVLGVLA SR+IGD YLKP+V +EPEV V ERT +DE LILASDGLWDVVSNE AC + R C   +                      S  +  DA+ LL +LA++R
Sbjct:  164 VRWKEAMLASFARMDGEVVG---SVAAAAPRVDGTEPSGFRTVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIGDYYLKPFVSAEPEVRVVERTDKDEFLILASDGLWDVVSNEVACKIARNCLNGR-------------AASMFPESVSGSSAADAAALLAELAVSR 360          
The following BLAST results are available for this feature:
BLAST of CX295636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
P2C24_ARATH1.293e-7164.93Probable protein phosphatase 2C 24 OS=Arabidopsis ... [more]
P2C37_ARATH2.880e-7163.06Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]
P2C03_ARATH4.912e-7159.83Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
P2C78_ARATH4.303e-6761.75Probable protein phosphatase 2C 78 OS=Arabidopsis ... [more]
P2C49_ORYSJ4.027e-6558.26Probable protein phosphatase 2C 49 OS=Oryza sativa... [more]
P2C09_ORYSJ3.901e-6055.79Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
P2C30_ORYSJ2.528e-5951.85Probable protein phosphatase 2C 30 OS=Oryza sativa... [more]
P2C68_ORYSJ2.367e-5755.09Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]
P2C08_ORYSJ1.177e-4848.62Probable protein phosphatase 2C 8 OS=Oryza sativa ... [more]
P2C51_ORYSJ7.631e-4851.17Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC05074C09SK DroRLeaf1 Citrus clementina cDNA clone C05074C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295636 ID=CX295636; Name=CX295636; organism=Citrus clementina; type=EST; length=759bp
AGGATTCGGCCGAGGGAATCCGTGAAGTGGAAGCAGACAATGCAGGCGAG
CTTTGGGAAGATGGATAAGGAGGTGCAAGATTGGAGTGTGAGTTCCAAGA
TCTCTAACTGCCGCTGCGAGTTACAGACTCCGCAGTGCGACGCCGTTGGA
TCTACCGCCGTCGTTGCTGTCGTCACTCCTGGAAAGCTTATCGTCTCTAA
CTGCGGCGACTCTCGTGCTGTGCTCTGCCGAAACGGCGTCGCGGTTCCTC
TGTCCAACGATCATAAACCTGATCGCCCGGATGAGTTGCTTAGAATCGAA
GCCGCCGGCGGCCGTGTGATTTACTGGGACGGTCCGAGAGTGCTTGGCGT
TCTCGCGATGTCGAGAGCGATCGGAGACAATTACTTAAAGCCGTATGTGA
TATCGGAGCCGGAGGTGACCGTGACTGAGCGTACGGCGGAGGATGAGTGT
TTGATTCTGGCGAGCGATGGGTTATGGGACGTGGTGTCGAACGAGACGGC
GTGCAGCGTGGTGCGCACGTGTTTCCGAGCTCAGAAGGCGGCGGCTGCAG
CTTCACCACCCGGATCGCCGGGGAGCGAGGTGGCAGTGTCTGGTCAAAGC
TCTGACAAAGCTTGCTTGGACGCATCAATTTTGTTGACCAAGCTGGCCTT
GGCTAGGCGGAGTTCGGATAATGTCAGCGTTGTGGTGGTCGATTTAGGAG
GAATCAAGTCAAAGCAGGGATTAGTAGTAATTAAATGAGTATATATATAT
ATACGCAAT
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