CX295639
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295639 vs. ExPASy Swiss-Prot
Match: ROS1_ARATH (Protein ROS1 OS=Arabidopsis thaliana GN=ROS1 PE=1 SV=2) HSP 1 Score: 320.087 bits (819), Expect = 6.447e-87 Identity = 152/217 (70.05%), Postives = 171/217 (78.80%), Query Frame = 3 Query: 9 EQNDFDWDSLRRQVEANGGKKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVSDHGSVDLEWLRDVPPDKAKEYLLSFRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVXXXXXXXXXXXXXXXXXXVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECMHXXXXXXXXRLALP 659 E+ FDWD LRR+ +A G +E+ T D++DW+A+R ADV ++A TIK RGMN+ LA RI+ FL+RLV+DHGS+DLEWLRDVPPDKAKEYLLSF GLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWV +LESIQKYLWPRLCKLDQ+TLYELHYQMITFGKVFCTKSKPNCNACPM+GEC H RLALP Sbjct: 853 EKKAFDWDCLRREAQARAGIREKTRSTMDTVDWKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVNDHGSIDLEWLRDVPPDKAKEYLLSFNGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYPMLESIQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMKGECRHFASAFASARLALP 1069
BLAST of CX295639 vs. ExPASy Swiss-Prot
Match: DME_ARATH (Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME PE=1 SV=2) HSP 1 Score: 310.457 bits (794), Expect = 5.108e-84 Identity = 148/218 (67.89%), Postives = 171/218 (78.44%), Query Frame = 3 Query: 6 GEQNDFDWDSLRRQVEANGGKKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVSDHGSVDLEWLRDVPPDKAKEYLLSFRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVXXXXXXXXXXXXXXXXXXVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECMHXXXXXXXXRLALP 659 G++ WDSLR+ VE N G++ER ++ DS+D+EA+R A +++I+ IKERGMNNMLA RIKDFL R+V DHG +DLEWLR+ PPDKAK+YLLS RGLGLKSVECVRLLTLH+LAFPVDTNVGRIAVR+GWV VLESIQK+LWPRLCKLDQRTLYELHYQ+ITFGKVFCTKS+PNCNACPMRGEC H RLALP Sbjct: 1443 GKKPTSQWDSLRKDVEGNEGRQERNKNNMDSIDYEAIRRASISEISEAIKERGMNNMLAVRIKDFLERIVKDHGGIDLEWLRESPPDKAKDYLLSIRGLGLKSVECVRLLTLHNLAFPVDTNVGRIAVRMGWVPLQPLPESLQLHLLELYPVLESIQKFLWPRLCKLDQRTLYELHYQLITFGKVFCTKSRPNCNACPMRGECRHFASAYASARLALP 1660
BLAST of CX295639 vs. ExPASy Swiss-Prot
Match: DML2_ARATH (DEMETER-like protein 2 OS=Arabidopsis thaliana GN=DML2 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 4.959e-71 Identity = 135/217 (62.21%), Postives = 154/217 (70.97%), Query Frame = 3 Query: 9 EQNDFDWDSLRRQVEANGGKKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVSDHGSVDLEWLRDVPPDKAKEYLLSFRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVXXXXXXXXXXXXXXXXXXVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECMHXXXXXXXXRLALP 659 ++ DWDSLR++ E+ G K+ER E T D++DW+A+RC DV+KIAN I +RGMNNMLA RIK FLNRLV HGS+DLEWLRDVPPDKAKEYLLS GLGLKSVECVRLL+LH +AFPVDTNVGRIAVRLGWV L+ + L L + LYELHY MITFGKVFCTK KPNCNACPM+ EC H RLALP Sbjct: 785 QKKSVDWDSLRKEAESGGRKRERTERTMDTVDWDALRCTDVHKIANIIIKRGMNNMLAERIKAFLNRLVKKHGSIDLEWLRDVPPDKAKEYLLSINGLGLKSVECVRLLSLHQIAFPVDTNVGRIAVRLGWVP------------------LQPLPDELQMHLLE-----LYELHYHMITFGKVFCTKVKPNCNACPMKAECRHYSSARASARLALP 978
BLAST of CX295639 vs. ExPASy Swiss-Prot
Match: DML3_ARATH (DEMETER-like protein 3 OS=Arabidopsis thaliana GN=DML3 PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.073e-57 Identity = 113/204 (55.39%), Postives = 133/204 (65.20%), Query Frame = 3 Query: 9 EQNDFDWDSLRRQVEANGGKKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVSDHGSVDLEWLRDVPPDKAKEYLLSFRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVXXXXXXXXXXXXXXXXXXVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECMH 620 E DW++LRR G RPE DS++W VR + N + TIK+RG +L+ RI FLN V+ +G++DLEWLR+ P K YLL G+GLKS ECVRLL L H AFPVDTNVGRIAVRLG V ++SIQKYLWPRLCKL Q TLYELHYQMITFGKVFCTK+ PNCNACPM+ EC + Sbjct: 496 EDEIVDWNNLRRMYTKEGS---RPEMHMDSVNWSDVRLSGQNVLETTIKKRGQFRILSERILKFLNDEVNQNGNIDLEWLRNAPSHLVKRYLLEIEGIGLKSAECVRLLGLKHHAFPVDTNVGRIAVRLGLVPLEPLPNGVQMHQLFEYPSMDSIQKYLWPRLCKLPQETLYELHYQMITFGKVFCTKTIPNCNACPMKSECKY 696 The following BLAST results are available for this feature:
BLAST of CX295639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295639 ID=CX295639; Name=CX295639; organism=Citrus clementina; type=EST; length=662bpback to top |