CX295643

Overview
NameCX295643
Unique NameCX295643
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14394 contig Ccv1_Contig14394:15..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295643 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.816e-56
Identity = 103/187 (55.08%), Postives = 127/187 (67.91%), Query Frame = 3
Query:  159 VTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGG--VACKSACEAFRQPQYCCNGAFSTPDTC 710
            V S  FT  NKC +TVWPG L+    P L +TGF L  G + +L   A W GR W R+ CS DS+GKF C TGDCG G++ C+G+GA+PPA+L E  L   GGQDFYDVSLVDG+NLP+ + P+GG G +C ST C  ++N  CP+EL   +D GS G  + CKSAC A  QPQYCC GA+ TPDTC
Sbjct:   20 VYSAKFTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSG-DCNSTSCAANINTVCPAEL---SDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTC 202          
BLAST of CX295643 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.436e-54
Identity = 99/188 (52.66%), Postives = 126/188 (67.02%), Query Frame = 3
Query:  150 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTC 710
            FS   +   T  NKC +TVWPG L+    P LS TGF L  G +++++AP+ W GR + RT CS D++GKFTC T DCG G++ C+G+GAAPPATL E  +   GGQDFYDVSLVDG+NLP+ V PQGG G  C ++ C  D+N  CP+ L+V    GS  +ACKSAC AF QP+YCC      P+TC
Sbjct:   19 FSGAHAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTG-KCKASTCPADINKVCPAPLQVKGSDGS-VIACKSACLAFNQPKYCCTPPNDKPETC 204          
BLAST of CX295643 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.297e-51
Identity = 98/188 (52.13%), Postives = 121/188 (64.36%), Query Frame = 3
Query:  150 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGRMWARTLCSQDSTGKFTCVTGDC-GGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTC 710
            F    + T +  N C + VWPG L++   P LSTTGF L    +  L+ P  W GR WART CS D++GKF C T DC  G++ C+G+GA PPATLAEF +   GGQDFYDVSLVDG+NLP+ V PQGG G +C +  C  ++NA CPSEL+     GS  VAC SAC  F  PQYCC    +TP+TC
Sbjct:   18 FGGAHAATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-DCKTASCPANVNAVCPSELQKKGSDGS-VVACLSACVKFGTPQYCCTPPQNTPETC 203          
BLAST of CX295643 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.489e-50
Identity = 103/184 (55.98%), Postives = 119/184 (64.67%), Query Frame = 3
Query:  159 VTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTC 710
            V +T FT+ N C  TVW G L+    P L   GF L  G ++ L APA W GR WART C+ D++G   CVTGDCGG L C+G G  PP TLAEF L G GG+DFYDVSLVDGYN+ + + P GG G +C   GCV DLNAACP  LKVM    +  VACKSACE F   QYCC GA   P+TC
Sbjct:   21 VMATDFTLRNNCPTTVWAGTLAG-QGPKLGDGGFELTPGASRQLTAPAGWSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNG-GGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSG-DCKYAGCVSDLNAACPDMLKVMDQ--NNVVACKSACERFNTDQYCCRGANDKPETC 198          
BLAST of CX295643 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.540e-50
Identity = 93/188 (49.47%), Postives = 121/188 (64.36%), Query Frame = 3
Query:  150 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTC 710
            FS   +   T  N C +TVWPG L+    P LS TGF L    +++++AP+ W GR W RT CS D+ GKFTC T DCG G++ C+G+GA PPATL E  +   GGQD+YDVSLVDG+NLP+ V PQGG G  C  + C  ++N  CP+ L+V    GS  ++CKSAC AF   +YCC    +TP+TC
Sbjct:   19 FSGAHAAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNKVCPAPLQVKAADGS-VISCKSACLAFGDSKYCCTPPNNTPETC 204          
BLAST of CX295643 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.171e-49
Identity = 96/183 (52.46%), Postives = 116/183 (63.39%), Query Frame = 3
Query:  165 STTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTC 710
            S   T  N C  T+WPG L++   P L  TGF L    + TL   A W GR WART C+ +S GKFTC T DC  G++ C+G+GA PPA+L E  +    G DFYDVSLVDGYNLPV V  +GG G +C +T C  ++NA CP+EL+V     S  +ACKSAC AF QPQYCC GAF T  TC
Sbjct:   22 SAKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKGRFWARTRCTTNS-GKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTG-DCKATSCRANVNAVCPAELQVKGSDAS-VLACKSACTAFNQPQYCCTGAFDTARTC 201          
BLAST of CX295643 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.483e-47
Identity = 87/172 (50.58%), Postives = 115/172 (66.86%), Query Frame = 3
Query:  198 HTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTC 710
            +TVWPG L+    P LS T F L    +++++AP+ W GR W RT CS D+ GKF+C T DCG G++ C+G+GA PPATL E  +   GGQD+YDVSLVDG+NLP+ V PQGG G  C  + C  ++N ACP++L+V    GS  ++CKSAC AF   +YCC     TP+TC
Sbjct:    1 NTVWPGTLTGDQKPQLSLTAFELASKASQSVDAPSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNMACPAQLQVKAADGS-VISCKSACLAFGDSKYCCTPPNDTPETC 170          
BLAST of CX295643 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.304e-46
Identity = 91/186 (48.92%), Postives = 110/186 (59.14%), Query Frame = 3
Query:  153 SCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTC 710
            S  +++T    NKC H VWPGI  +A    L+  GF L   +  +L  P  W GR W R  C+ D +G+  C TGDCGG L C+G+G  PPATLAE  L      DFYDVSLVDGYNL + ++P  G G  C+  GCV DLN  CP  L+V +  G   VACKSAC AF  PQYCC G F  P +C
Sbjct:   16 SHASASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLG--PELDFYDVSLVDGYNLAMSIMPVKGSG-QCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSC 198          
BLAST of CX295643 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.225e-46
Identity = 94/188 (50.00%), Postives = 112/188 (59.57%), Query Frame = 3
Query:  150 FSCVTSTTFTMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAPASWGGRMWARTLCSQDSTGKFTCVTGDC-GGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTC 710
            F    + T +  N C +TVWP    N   P LSTTGF L    +  L+ P  W GR WART CS D++GKF C T DC  G+L C+G    PPATLAEF +   GGQDFYDVSLVDG+NLP+ V PQGG G  C    C  ++N  CPSEL+ +   GS  VAC SAC  F +PQYCC     T + C
Sbjct:   18 FGGAHAATMSFKNNCPYTVWPASFGN---PQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-TCKMGSCAANVNLVCPSELQKIGSDGS-VVACLSACVKFGEPQYCCTPPQETKEKC 200          
BLAST of CX295643 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 87/182 (47.80%), Postives = 113/182 (62.09%), Query Frame = 3
Query:  177 TMINKCDHTVWPGILSNADSPALSTTGFPLEKGETKTLNAP-ASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDF--YDVSLVDGYNLPVLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGG-VACKSACEAFRQPQYCCNGAFSTPDTC 710
            T++N C +T+WP I  NA  P L   GF L     ++  AP A W GR+WART C+    GKF C TGDCGG++EC G G A PATLA+F L  +G  DF  Y VSLVDG+N+P+ V P  G G  C   GC  +L  +CP+ L+  + GG G  V CKSACEAF+  ++CC   +++P TC
Sbjct:   32 TLVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQH-GKFYCATGDCGGRIECDGLGGAAPATLAQFVLH-HGHADFSTYGVSLVDGFNIPLTVTPHEGKGV-CPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTC 210          
The following BLAST results are available for this feature:
BLAST of CX295643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP1_PYRPY1.816e-5655.08Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TLP1_PRUPE8.436e-5452.66Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP_PRUAV2.297e-5152.13Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
PR5_ARATH1.489e-5055.98Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TP1A_MALDO2.540e-5049.47Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP1_CASSA8.171e-4952.46Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TP1B_MALDO4.483e-4750.58Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLPH_ARATH1.304e-4648.92Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TLP2_PRUPE2.225e-4650.00Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
OLP1_SOLLC2.546e-4247.80Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC05074D04SK DroRLeaf1 Citrus clementina cDNA clone C05074D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295643 ID=CX295643; Name=CX295643; organism=Citrus clementina; type=EST; length=724bp
TCTCCCTCTTCTTCTTCATTGACCTTTTTCTCTTTTCTTTTTTTTCTTTT
TTTTTTTTTATATTTTTAACATTCAGCAGCCACCAGCCGCCAGCTCCTCC
GATGGCCGCCTCTCAACTAACACTTTTACTTTTAATCACTCATTTAATAT
TTTCCTGTGTGACATCCACCACCTTCACAATGATCAACAAATGCGACCAC
ACAGTATGGCCCGGCATTCTCTCTAACGCCGACTCTCCCGCACTCTCCAC
CACCGGCTTCCCCCTTGAAAAGGGAGAGACCAAGACCCTCAACGCACCCG
CTTCGTGGGGCGGCCGCATGTGGGCCAGAACACTCTGCTCCCAGGACTCC
ACCGGTAAGTTCACCTGCGTCACAGGTGATTGCGGCGGCAAGCTGGAATG
CTCCGGCAGTGGTGCTGCCCCACCCGCCACTCTTGCTGAGTTCAAGCTCG
ATGGCTATGGTGGCCAAGACTTCTATGATGTCAGTTTGGTCGACGGCTAC
AACCTCCCCGTGCTTGTCGTTCCTCAGGGTGGTGACGGACCCAATTGTAC
AAGCACGGGATGCGTTGTCGACTTGAACGCCGCGTGTCCTTCGGAGCTTA
AGGTTATGACCGACGGTGGCAGCGGAGGTGTTGCTTGCAAGAGCGCGTGC
GAAGCCTTTAGGCAGCCGCAGTACTGTTGTAATGGCGCGTTTAGTACTCC
CGATACATGCAGCATCTACTTATC
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