CX295655

Overview
NameCX295655
Unique NameCX295655
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4352 contig Ccv1_Contig4352:300..955. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM1_DIACA (S-adenosylmethionine decarboxylase proenzyme 1 OS=Dianthus caryophyllus GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.971e-50
Identity = 100/133 (75.19%), Postives = 110/133 (82.71%), Query Frame = 3
Query:  288 DTTMAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            + TMA+SAIGFEG+EKRLEISFFEP IFVDPEGKGLR L+KAQLDEILGPAECTIV SL+N+ VDSYVLSESSLFVYSYKIIIKTCG              A+ L L+V+SVRYTRGSFIFPG Q YPHR+FS
Sbjct:   22 NNTMALSAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAQLDEILGPAECTIVDSLANESVDSYVLSESSLFVYSYKIIIKTCGTTKLLHSILPILTLADGLCLDVKSVRYTRGSFIFPGAQSYPHRSFS 154          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.186e-50
Identity = 99/133 (74.44%), Postives = 108/133 (81.20%), Query Frame = 3
Query:  288 DTTMAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            D+ + VSAIGFEG+EKRLEISFFEP +F DP GKGLR L+KAQLDEILGPAECTIV SLSND+VDSYVLSESSLFVYSYKIIIKTCG              AETLSL V+ VRYTRGSFIFPG Q +PHR+FS
Sbjct:    2 DSALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFS 134          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 8.846e-50
Identity = 99/133 (74.44%), Postives = 107/133 (80.45%), Query Frame = 3
Query:  288 DTTMAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            D  + VSAIGFEG+EKRLEISFFEP +F DP GKGLR L+KAQLDEILGPAECTIV SLSND+VDSYVLSESSLFVYSYKIIIKTCG              AETLSL V+ VRYTRGSFIFPG Q +PHR+FS
Sbjct:    2 DMALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFS 134          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM2_DIACA (S-adenosylmethionine decarboxylase proenzyme 2 OS=Dianthus caryophyllus GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.574e-49
Identity = 98/133 (73.68%), Postives = 108/133 (81.20%), Query Frame = 3
Query:  288 DTTMAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            +  M +SAIGFEG+EKRLEISFFEP IFVDPEGKGLR L+KA LDEILGPAECTIV SL+N+ VDSYVLSESSLFVYSYKIIIKTCG              AETL L+V+SVRYTRGSFIFPG Q +PHR+FS
Sbjct:   13 NNNMTISAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAHLDEILGPAECTIVDSLANESVDSYVLSESSLFVYSYKIIIKTCGTTKLLNSIPPILRLAETLFLDVKSVRYTRGSFIFPGAQSFPHRSFS 145          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_SPIOL (S-adenosylmethionine decarboxylase proenzyme OS=Spinacia oleracea GN=SAMDC PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.179e-48
Identity = 97/130 (74.62%), Postives = 107/130 (82.31%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            MA+SAIGFEG+EKRLEI+FFEPSIFVDPEGKGLR L KAQLDEILGPAECTIV SL+N+ VDSYVLSESSLF+Y+YKIIIKTCG              A  LSL+V+SVRYTRGSFIFPG Q Y HR+FS
Sbjct:    1 MAISAIGFEGFEKRLEITFFEPSIFVDPEGKGLRALCKAQLDEILGPAECTIVDSLANESVDSYVLSESSLFIYAYKIIIKTCGTTKLLRAIPPILRLAGKLSLDVKSVRYTRGSFIFPGAQSYAHRSFS 130          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.854e-48
Identity = 97/130 (74.62%), Postives = 104/130 (80.00%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            + VSAIGFEG+EKRLEISF EP +F DP GKGLR LTKAQLDEILGPAECTIV +LSND VDSYVLSESSLFVYSYKIIIKTCG              AETLSL V+ VRYTRGSFIFPG Q +PHR+FS
Sbjct:    3 LPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLTKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFS 132          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.412e-47
Identity = 96/130 (73.85%), Postives = 104/130 (80.00%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            + VSAIGFEG+EKRLEISF EP +F DP GKGLR L+KAQLDEILGPAECTIV +LSND VDSYVLSESSLFVYSYKIIIKTCG              AETLSL V+ VRYTRGSFIFPG Q +PHR+FS
Sbjct:    5 LPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFS 134          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.412e-47
Identity = 93/130 (71.54%), Postives = 109/130 (83.85%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            MAVSAIGFEG+EKRLEISF +P +F DP+G+GLR LTK+QLDEIL PAECTIVSSL+N++VDSYVLSESSLFVY+YK+IIKTCG              A+++SLNVRSVRYTRGSFIFPG Q +PHR+FS
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKLIIKTCGTTKLLLSIPPILKLADSISLNVRSVRYTRGSFIFPGAQSFPHRHFS 130          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.412e-47
Identity = 96/128 (75.00%), Postives = 104/128 (81.25%), Query Frame = 3
Query:  303 VSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            VSAIGFEG+EKRLEISFFEPS F DPEGKGLR L+K QLDE LGPAECTIV+SLSN+ VDSYVLSESSLFVY+YKIIIKTCG              A++LSL VRSVRYTRG FIFPG Q YPHR+FS
Sbjct:    5 VSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLSKNQLDEFLGPAECTIVASLSNEHVDSYVLSESSLFVYAYKIIIKTCGTTKLLKSIPPILKLADSLSLTVRSVRYTRGCFIFPGAQSYPHRSFS 132          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.409e-47
Identity = 96/130 (73.85%), Postives = 104/130 (80.00%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            + VSAIGFEG+EKRLEISF EP +F DP GKGLR L+KAQLDEILGPAECTIV +LSND VDSYVLSESSLFVYSYKIIIKTCG              AETLSL V+ VRYTRGSFIFPG Q +PHR+FS
Sbjct:    5 LPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFS 134          
The following BLAST results are available for this feature:
BLAST of CX295655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
DCAM1_DIACA3.971e-5075.19S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM_TOBAC5.186e-5074.44S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_NICSY8.846e-5074.44S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM2_DIACA2.574e-4973.68S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM_SPIOL2.179e-4874.62S-adenosylmethionine decarboxylase proenzyme OS=Sp... [more]
DCAM_SOLCI4.854e-4874.62S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_SOLTU1.412e-4773.85S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_PEA1.412e-4771.54S-adenosylmethionine decarboxylase proenzyme OS=Pi... [more]
DCAM_DAUCA1.412e-4775.00S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_DATST2.409e-4773.85S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]

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Properties
Property NameValue
Genbank descriptionC05074E04SK DroRLeaf1 Citrus clementina cDNA clone C05074E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295655 ID=CX295655; Name=CX295655; organism=Citrus clementina; type=EST; length=686bp
GTTAACATTCTTGTTCTTCATTGTCTTCTGCAGTGCGCACGCAAGCCATC
CTGATATTCTCAAAGTCTGCAATCAGATCACATAGCGTGATCCATCAACT
GTTAGTTTCCTGTAGTTAGTTATATTAGGTTTACTCCCCTTTTGTAGATC
AACATCTTCCTCTCTCTTTCTCTCTCTTCGCGATTGTGGTTATTGCTTCT
GCAGTCTCTCTTCTACTGTCATCATCCCTGCTGCTTCTGGTTTCTCTGCA
ATCTTAAAGTTAGATTTCAGCTGCAATGGTTTCTGCTGATACCACCATGG
CAGTCTCTGCAATTGGTTTTGAAGGTTATGAAAAGAGGCTGGAGATATCA
TTTTTTGAACCCAGCATCTTTGTTGATCCTGAAGGAAAGGGCCTTAGGCG
CCTGACCAAGGCCCAGCTGGATGAGATTTTAGGACCAGCTGAATGCACTA
TTGTCTCTTCACTGTCAAATGATGAAGTTGACTCCTATGTCCTATCCGAG
TCTAGCCTCTTTGTTTACTCTTACAAGATCATCATCAAAACTTGTGGGAC
TACAAAGTTGCTTCTTTCAATCCCACCCATCCTGAAACTGGCTGAGACCC
TTTCTCTCAATGTACGATCAGTGAGGTATACACGTGGGAGTTTCATTTTC
CCTGGGAATCAGCTATACCCTCATCGCAACTTTTCT
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