CX295671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295671 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14 Identity = 62/234 (26.50%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 4 LSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDN-TPLLTSSRIRIXXXXXXXXXXXXXXXXXXXXXXXXXWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSKSMHDSSL---------YLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFT 675 LS++P +L PES RY + G +A L +IA N A +P G L+ SR ++ D TP + + + W ++F N+F+YYG++L+T++L CG + SL Y+ + +L E PG+++ I+DR GRK ++ + ++ C L L + ++T LL AR F G F A ++T Sbjct: 243 LSAVPLLLFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLI---ISRQEDRGKMRDLFTPHFRWTTLLL-------------------------WFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYT 448
BLAST of CX295671 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14 Identity = 62/234 (26.50%), Postives = 102/234 (43.59%), Query Frame = 1 Query: 4 LSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDN-TPLLTSSRIRIXXXXXXXXXXXXXXXXXXXXXXXXXWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSKSMHDSSL---------YLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFT 675 LS++P +L PES RY + G +A L +IA N A +P G L+ SR ++ D TP + + + W ++F N+F+YYG++L+T++L CG + SL Y+ + +L E PG+++ I+DR GRK ++ + ++ C L L + ++T LL AR F G F A ++T Sbjct: 243 LSAVPLLLFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLI---ISRQEDRGKMRDLFTPHFRWTTLLL-------------------------WFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYT 448
BLAST of CX295671 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.983e-13 Identity = 61/234 (26.07%), Postives = 101/234 (43.16%), Query Frame = 1 Query: 4 LSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDN-TPLLTSSRIRIXXXXXXXXXXXXXXXXXXXXXXXXXWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSKSMHDSSL---------YLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFT 675 LS++P +L PES RY + G +A L +IA N A +P G L+ SR ++ D TP + + + W ++F N+F+YYG++L+T++L C + SL Y+ + +L E PG+++ I+DR GRK ++ + ++ C L L + ++T LL AR F G F A ++T Sbjct: 243 LSAVPLLLFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLI---ISRQEDRGKMRDLFTPHFRWTTLLL-------------------------WFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVVFSFCSLLLFICVGRNMLTLLLFIARAFISGGFQAAYVYT 448
BLAST of CX295671 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13 Identity = 60/234 (25.64%), Postives = 101/234 (43.16%), Query Frame = 1 Query: 4 LSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDN-TPLLTSSRIRIXXXXXXXXXXXXXXXXXXXXXXXXXWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSKSMHDSSL---------YLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFT 675 LS+ P +L PES RY + G +A L +IA N A +P G L+ SR ++ D TP + + + W ++F N+F+YYG++L+T++L C + SL Y+ + +L E PG+++ ++DR GRK ++ + ++ +C L L + ++T LL AR F G F A ++T Sbjct: 243 LSAAPLLVFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLI---ISRQEDRGKMRDLFTPHFRWTTLLL-------------------------WFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFVIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYT 448
BLAST of CX295671 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13 Identity = 61/234 (26.07%), Postives = 101/234 (43.16%), Query Frame = 1 Query: 4 LSSIPSFAVLLLYSLAPESPRYLNVKGRTTEARNILDKIALLNKAKLPNGMLVSDATSRPDEELAPPDN-TPLLTSSRIRIXXXXXXXXXXXXXXXXXXXXXXXXXWMLFFGNSFTYYGIILMTSKLSSTQSKCGTTLTVSKSMHDSSL---------YLSVFLASLGELPGLVLAGIIVDRAGRKLSLTIMLILVFICILPLAMLQSNILITGLLVGARMFAFGAFTIACIFT 675 LS+ P +L PES RY + G +A L +IA N A +P G L+ SR ++ D TP + + + W ++F N+F+YYG++L+T++L C + SL Y+ + +L E PG+++ ++DR GRK ++ + I+ +C L L + ++T LL AR F G F A ++T Sbjct: 243 LSAAPLLLFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLI---ISRQEDRGKMRDLFTPHFRWTTLLL-------------------------WFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFIIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYT 448 The following BLAST results are available for this feature:
BLAST of CX295671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295671 ID=CX295671; Name=CX295671; organism=Citrus clementina; type=EST; length=695bpback to top |