CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1819 contig Ccv1_Contig1819:5..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.741e-63
Identity = 115/148 (77.70%), Postives = 129/148 (87.16%), Query Frame = 2
Query:  287 VRASAEVA-DLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V+++AEV  + QSK+T+KVYFD+S+GNPVGKLAGRIVIGLYGDDVP+T ENFRALCTGEKGFGYKGSTFHRVI+DFMIQ             S+YGRTFKDENFKLSH+GPGV+SMANAGPNTNGSQFFICT+KT WLD RHVVFGQV
Sbjct:   74 VQSNAEVVTEPQSKITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQV 221          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.713e-52
Identity = 99/150 (66.00%), Postives = 116/150 (77.33%), Query Frame = 2
Query:  278 RSLVRASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +S+     EV + Q+KVTNKVYFDV IG   G++AGRIV+GL+G+ VP+T ENFRALCTGEK +GYKGS+FHR+IKDFMIQ             SIYG  F+DENF L H GPG++SMANAGPNTNGSQFFICTVKT WLD +HVVFGQV
Sbjct:   77 KSMAAEEEEVIEPQAKVTNKVYFDVEIG---GEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQV 223          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.554e-49
Identity = 93/145 (64.14%), Postives = 111/145 (76.55%), Query Frame = 2
Query:  293 ASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            A  EVA+LQ+KVT+K++FD+ IG   G+ AGRIVIGL+GD VP+T ENF+ L TG KG+GY+GS FHR+I +FMIQ             SIYG  F+DE+F L H+GPGV+SMANAGPNTNGSQFFICTV TPWLD RHVVFG V
Sbjct:   69 AQGEVAELQAKVTSKIFFDIEIG---GESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHV 210          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.182e-44
Identity = 91/140 (65.00%), Postives = 101/140 (72.14%), Query Frame = 2
Query:  308 ADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            A    KVTNKVYFD+  G+   K  GRIV+GLYG+ VP+T ENFRAL TGEKG+GYK S FHRVIKDFMIQ             SIYG  F DENFKL H GPG++SMANAG +TNGSQFFI TV T WLD RHVVFG+V
Sbjct:   22 ASTNPKVTNKVYFDIKQGD---KDLGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKV 158          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.861e-44
Identity = 91/157 (57.96%), Postives = 102/157 (64.97%), Query Frame = 2
Query:  257 PTRKMGTRSLVRASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            P R    R+  + S + +   S     VY DV      GK  GR+V+ L  D VP+TAENFRALCTGEKGFGYKGSTFHRVI  FM Q             SIYG  F DENF L H+GPGV+SMANAGPNTNGSQFFICT+KT WLD +HVVFG V
Sbjct:   21 PLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDAN---GKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHV 174          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.861e-44
Identity = 89/135 (65.93%), Postives = 100/135 (74.07%), Query Frame = 2
Query:  323 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            K+TNKVYFD+  G+   +  GRIV+GLYG  VPETAENFRAL TGEKGFGY+GS FHRVIKDFMIQ             SIYG  FKDENFKL H   G++SMANAG +TNGSQFFI T  TPWLD +HVVFG+V
Sbjct:   31 KITNKVYFDIQHGD---ESLGRIVLGLYGKTVPETAENFRALATGEKGFGYEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEV 162          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.083e-43
Identity = 88/135 (65.19%), Postives = 101/135 (74.81%), Query Frame = 2
Query:  323 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            K+T+KV+FD+  G+   K  GR+V+GLYG  VP+TAENFRAL TGEKGFGY+GSTFHRVIKDFMIQ             SIYG  F DENFKL H   G++SMANAG +TNGSQFFI TV TPWLD RHVVFG+V
Sbjct:   32 KITSKVFFDIEHGD---KPLGRVVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEV 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.412e-43
Identity = 91/149 (61.07%), Postives = 104/149 (69.80%), Query Frame = 2
Query:  281 SLVRASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +LV A         K+T+KV+FD+  G+   K  GRIV+GLYG  VP+TAENFRAL TGEKGFGY+GSTFHRVIK FMIQ             SIYG  F DENFKL H   G++SMANAG +TNGSQFFI TV TPWLD RHVVFG+V
Sbjct:   19 ALVHAEETKEPRGPKITSKVFFDIEHGD---KPLGRIVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEV 164          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.151e-43
Identity = 89/140 (63.57%), Postives = 101/140 (72.14%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEK------GFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +TNKVYFD+  G   GK  GRIV+GLYG  VP+TAENFRAL TG+       G+GY+GS+FHR+IK+FMIQ             SIYG  F DENFKL H GPGV+SMANAG +TNGSQFFICTVKT WLD RHVVFG V
Sbjct:   43 ITNKVYFDIEHG---GKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGEDLGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHV 179          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.019e-43
Identity = 90/148 (60.81%), Postives = 105/148 (70.95%), Query Frame = 2
Query:  287 VRASAEVADLQ-SKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +R++ E+   Q S     VYFD+  GN   K  GR+V+GLYG  VP+TAENFRAL TGEKGFGY+GSTFHRVIK+FMIQ             SIYG  FKDENFK+ H   G++SMANAG +TNGSQFFI TV TPWLD RHVVFG+V
Sbjct:    4 LRSAEEITSQQYSSGLATVYFDIEHGN---KPLGRVVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEV 148          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CP20B_ARATH2.741e-6377.70Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
CP20C_ARATH3.713e-5266.00Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
CYPB_VICFA6.554e-4964.14Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPIB_ORPSP2.182e-4465.00Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPIF_HUMAN4.861e-4457.96Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_EMENI4.861e-4465.93Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIB_ASPNG1.083e-4365.19Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_ASPFU2.412e-4361.07Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_CRYNE3.151e-4363.57Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIB_ASPOR7.019e-4360.81Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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