CX295715

Overview
NameCX295715
Unique NameCX295715
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length666
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295715 vs. ExPASy Swiss-Prot
Match: FENR1_TOBAC (Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic OS=Nicotiana tabacum GN=PETH PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 1.480e-59
Identity = 110/129 (85.27%), Postives = 119/129 (92.25%), Query Frame = 2
Query:  278 FFQVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSL 664
            F +VP YY++VS G R+VS+RAQVTTEAPAKVEK SKK +EGVIVNKF+PK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIGVIADGVD N KPHKLRLYS ASSALGDFGDSKTVSL
Sbjct:   33 FNKVPLYYRNVSGGSRLVSIRAQVTTEAPAKVEKISKKQDEGVIVNKFRPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIADGVDANGKPHKLRLYSTASSALGDFGDSKTVSL 161          

HSP 2 Score: 22.7126 bits (47), Expect = 1.480e-59
Identity = 14/33 (42.42%), Postives = 15/33 (45.45%), Query Frame = 3
Query:   96 AVSAAVXXXXXXXXXXXXXXXIISPDRITFRKV 194
            AVSAAV               IIS D+I F KV
Sbjct:    4 AVSAAVSLPSSKSTSFSSRTSIISTDKINFNKV 36          
BLAST of CX295715 vs. ExPASy Swiss-Prot
Match: FENR1_PEA (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Pisum sativum GN=PETH PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.598e-55
Identity = 98/120 (81.67%), Postives = 110/120 (91.67%), Query Frame = 2
Query:  305 DVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSL 664
            +VS  GRV ++RAQVTTEAPAKV K SKK +E ++VNKFKPK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIG++ DG+DKN KPHKLRLYSIASSA+GDFGDSKTVSL
Sbjct:   40 NVSISGRVGTIRAQVTTEAPAKVVKHSKKQDENIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSL 159          

HSP 2 Score: 25.0238 bits (53), Expect = 4.598e-55
Identity = 12/36 (33.33%), Postives = 20/36 (55.56%), Query Frame = 3
Query:   93 AAVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVTV 200
            AAV+AAV               I++P+R+ F+KV++
Sbjct:    3 AAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSL 38          
BLAST of CX295715 vs. ExPASy Swiss-Prot
Match: FENR_SPIOL (Ferredoxin--NADP reductase, chloroplastic OS=Spinacia oleracea GN=PETH PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.444e-53
Identity = 99/133 (74.44%), Postives = 115/133 (86.47%), Query Frame = 2
Query:  284 QVPFYYKDVSTGGRVVSVRAQVTTE------APAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSL 664
            +VP YY++VS  G++  +RAQ+ ++      APAKVEK SKKMEEG+ VNKFKPKTPY+GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+GVI DG DKN KPHKLRLYSIASSALGDFGD+K+VSL
Sbjct:   36 KVPLYYRNVSATGKMGPIRAQIASDVEAPPPAPAKVEKHSKKMEEGITVNKFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSL 168          

HSP 2 Score: 21.9422 bits (45), Expect = 1.444e-53
Identity = 7/12 (58.33%), Postives = 12/12 (100.00%), Query Frame = 3
Query:  159 IISPDRITFRKV 194
            +ISPD+I+++KV
Sbjct:   26 VISPDKISYKKV 37          
BLAST of CX295715 vs. ExPASy Swiss-Prot
Match: FENR_MESCR (Ferredoxin--NADP reductase, chloroplastic OS=Mesembryanthemum crystallinum GN=PETH PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.028e-53
Identity = 101/131 (77.10%), Postives = 114/131 (87.02%), Query Frame = 2
Query:  278 FFQVPFYYKDVSTGGRVVSVRAQVT-TEAP-AKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSL 664
            F +VP YY++VS GG+V ++RA  +  EAP AKVEK SKKMEEGVIVNK+KPK PY GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+GVI +G+DKN KPHKLRLYSIAS  LGDFGDSKTVSL
Sbjct:   34 FNKVPLYYRNVSVGGKVGTIRAVASDVEAPVAKVEKHSKKMEEGVIVNKYKPKNPYTGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPEGIDKNGKPHKLRLYSIASRPLGDFGDSKTVSL 164          
BLAST of CX295715 vs. ExPASy Swiss-Prot
Match: FENR_VICFA (Ferredoxin--NADP reductase, chloroplastic OS=Vicia faba GN=PETH PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.204e-52
Identity = 96/122 (78.69%), Postives = 109/122 (89.34%), Query Frame = 2
Query:  308 VSTGGRVVSVRAQVTTEAPA---KVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSL 664
            VS  GRV ++RAQ+TTEA A   KV K SKK +EG++VNKFKPK PY+GRCLLNTKITGDDAPGETWHMVF+TEGEVPY+EGQSIG++ DG+DKN KPHKLRLYSIASSA+GDFGDSKTVSL
Sbjct:   41 VSISGRVGTIRAQITTEAEAPVTKVVKHSKKQDEGIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFTTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSL 162          

HSP 2 Score: 25.0238 bits (53), Expect = 1.204e-52
Identity = 12/36 (33.33%), Postives = 20/36 (55.56%), Query Frame = 3
Query:   93 AAVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVTV 200
            AAV+AAV               I++P+R+ F+KV++
Sbjct:    3 AAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSL 38          
BLAST of CX295715 vs. ExPASy Swiss-Prot
Match: FNRL1_ARATH (Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=LFNR1 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.282e-50
Identity = 96/118 (81.36%), Postives = 106/118 (89.83%), Query Frame = 2
Query:  323 RVVSVRAQVTTEA----PAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSL 664
            RVVSV+AQVTT+     P KV KESKK EEG++VNKFKPK PY GRCLLNTKITGDDAPGETWH+VF+TEGEVPY+EGQSIGVI +G+DKN KPHKLRLYSIASSA+GDFGDSKTVSL
Sbjct:   42 RVVSVKAQVTTDTTEAPPVKVVKESKKQEEGIVVNKFKPKNPYTGRCLLNTKITGDDAPGETWHIVFTTEGEVPYREGQSIGVIPEGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSL 159          
BLAST of CX295715 vs. ExPASy Swiss-Prot
Match: FNRL2_ARATH (Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.567e-48
Identity = 97/136 (71.32%), Postives = 114/136 (83.82%), Query Frame = 2
Query:  278 FFQVPFYYK--DVSTGGRVVSVRAQVTTEA----PAK-VEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSL 664
            F +  FYYK  +V TG RV S++AQ+TTE     PAK VEK SKK EEGVIVN+++PK PY G+CLLNTKIT DDAPGETWHMVFS +GE+PY+EGQS+GVIADG+DKN KPHK+RLYSIASSALGD G+S+TVSL
Sbjct:   33 FTKGAFYYKSNNVVTGKRVFSIKAQITTETDTPTPAKKVEKVSKKNEEGVIVNRYRPKEPYTGKCLLNTKITADDAPGETWHMVFSHQGEIPYREGQSVGVIADGIDKNGKPHKVRLYSIASSALGDLGNSETVSL 168          
BLAST of CX295715 vs. ExPASy Swiss-Prot
Match: FENR1_ORYSJ (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.732e-47
Identity = 93/121 (76.86%), Postives = 104/121 (85.95%), Query Frame = 2
Query:  323 RVVSVRAQVTTE-------APAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSL 664
            R + +RAQV+T        APAK EK SKK +EGV+ NK++PK PY+G+CLLNTKIT DDAPGETWHMVFSTEGE+PY+EGQSIGVIADGVDKN KPHKLRLYSIASSALGDFGDSKTVSL
Sbjct:   41 RGLLLRAQVSTTDAAAVAAAPAKKEKISKKHDEGVVTNKYRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGEIPYREGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSL 161          
BLAST of CX295715 vs. ExPASy Swiss-Prot
Match: FENR_CYAPA (Ferredoxin--NADP reductase, cyanelle OS=Cyanophora paradoxa GN=PETH PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.072e-28
Identity = 60/116 (51.72%), Postives = 80/116 (68.97%), Query Frame = 2
Query:  323 RVVSVRAQVTTEAPAKVEKES--KKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSL 664
            + VS +   T E    +  ++   K +  + +N F+P  PYIG+C+ N +I G+ APGET H++F+ EG+VPY EGQSIG+I  G DK+ KPHKLRLYSIAS+  GDFGD KTVSL
Sbjct:   47 QAVSAKPATTFEVDTTIRAQAVDAKKKGDIPLNLFRPANPYIGKCIYNERIVGEGAPGETKHIIFTHEGKVPYLEGQSIGIIPPGTDKDGKPHKLRLYSIASTRHGDFGDDKTVSL 162          
BLAST of CX295715 vs. ExPASy Swiss-Prot
Match: FENR_SYNP2 (Ferredoxin--NADP reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petH PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.572e-22
Identity = 56/135 (41.48%), Postives = 81/135 (60.00%), Query Frame = 2
Query:  317 GGRVVSVR-----AQVTTEAPAKVEKES-------------KKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSL 664
            GG++VS+R     AQ+ +E  +  +  +             K  +  V VN ++PKTP++G+C+ N ++  +   G   H+ F  +EG++ Y EGQSIG+I  G DKN KPHKLRLYSIAS+  GD  D+KTVSL
Sbjct:   65 GGKIVSIRPAEDAAQIVSEGQSSAQASAQSPMASSTKIVHPKTTDTSVPVNIYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSL 199          
The following BLAST results are available for this feature:
BLAST of CX295715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
FENR1_TOBAC1.480e-5985.27Ferredoxin--NADP reductase, leaf-type isozyme, chl... [more]
FENR1_PEA4.598e-5581.67Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_SPIOL1.444e-5374.44Ferredoxin--NADP reductase, chloroplastic OS=Spina... [more]
FENR_MESCR8.028e-5377.10Ferredoxin--NADP reductase, chloroplastic OS=Mesem... [more]
FENR_VICFA1.204e-5278.69Ferredoxin--NADP reductase, chloroplastic OS=Vicia... [more]
FNRL1_ARATH1.282e-5081.36Ferredoxin--NADP reductase, leaf isozyme 1, chloro... [more]
FNRL2_ARATH1.567e-4871.32Ferredoxin--NADP reductase, leaf isozyme 2, chloro... [more]
FENR1_ORYSJ1.732e-4776.86Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_CYAPA3.072e-2851.72Ferredoxin--NADP reductase, cyanelle OS=Cyanophora... [more]
FENR_SYNP29.572e-2241.48Ferredoxin--NADP reductase OS=Synechococcus sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionC05075B05SK DroRLeaf1 Citrus clementina cDNA clone C05075B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295715 ID=CX295715; Name=CX295715; organism=Citrus clementina; type=EST; length=666bp
GAGGCTCACTTCTTCACTTAAAACGTCAACACCCCTTTAAATTTTCTTCT
CTCTTCATCTAAATTCTTCTTTATCATCACTTATCAATCATGGCTGCAGT
GAGTGCTGCAGTTTCTCTTCCGACTTCCAAGTCCACTTCGCTTCCAACCA
GAACCTCTATCATCTCTCCTGACAGAATCACCTTCAGAAAGGTAACAGTT
TTGCGCCCATGCATGGTTAGACGGCTGCCTTCTTTATTGTTGAATTTCAA
GTTTTTTTTGGGTGAATGTGTTGTGGCTTTTTTCAGGTTCCATTTTACTA
CAAAGATGTTTCAACTGGAGGGAGAGTGGTTTCTGTCAGAGCTCAGGTTA
CCACTGAGGCTCCTGCTAAGGTTGAGAAAGAGTCCAAGAAAATGGAGGAA
GGTGTTATTGTTAACAAGTTCAAACCTAAGACACCTTACATTGGCAGATG
CCTTTTAAACACTAAGATCACTGGTGATGATGCTCCTGGAGAGACCTGGC
ACATGGTCTTCAGCACTGAAGGAGAGGTTCCCTACAAAGAAGGGCAATCA
ATTGGGGTGATTGCAGATGGTGTTGACAAGAATGCGAAGCCTCACAAACT
GAGATTATACTCCATTGCTAGCAGTGCCCTTGGTGACTTTGGAGACTCCA
AAACTGTTTCTTTATG
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