CX295725
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295725 vs. ExPASy Swiss-Prot
Match: CP058_HUMAN (UPF0420 protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 8.047e-33 Identity = 70/150 (46.67%), Postives = 96/150 (64.00%), Query Frame = 3 Query: 234 LQA-FVPEGFPGSVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVLFTFYQGSNLDSNAKMWRLVAXXXXXXXXXXXXXSPLFPSAFAFVVCLGSLSRSFTGVASGATRAALTQHFALQN 680 LQA F+P+GFP SV+PDY+P+Q+WDS+Q ++ + L+TQA+L IGVG ATV AT W ++D TGMLG ++F +++GS LD NAK WRL A +P++P F V +L++ VA GATRAALT H A +N Sbjct: 73 LQAVFLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGATRAALTVHQARRN 222
BLAST of CX295725 vs. ExPASy Swiss-Prot
Match: CP058_PONAB (UPF0420 protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 70/150 (46.67%), Postives = 96/150 (64.00%), Query Frame = 3 Query: 234 LQA-FVPEGFPGSVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVLFTFYQGSNLDSNAKMWRLVAXXXXXXXXXXXXXSPLFPSAFAFVVCLGSLSRSFTGVASGATRAALTQHFALQN 680 LQA F+P+GFP SV+PDY+P+Q+WDS+Q ++ + L+TQA+L IGVG ATV AT W ++D TGMLG ++F +++GS LD NAK WRL A +P++P F V +L++ VA GATRAALT H A +N Sbjct: 73 LQAVFLPQGFPDSVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGATRAALTVHQARRN 222
BLAST of CX295725 vs. ExPASy Swiss-Prot
Match: CP058_MOUSE (UPF0420 protein C16orf58 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.812e-32 Identity = 65/152 (42.76%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 225 SRVLQAFVPEGFPGSVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVLFTFYQGSNLDSNAKMWRLVAXXXXXXXXXXXXXSPLFPSAFAFVVCLGSLSRSFTGVASGATRAALTQHFALQN 680 S + +P+GFP SV+PDY+P+Q+WDS+Q ++ + L+TQA+L +GVG A+V AT W ++D TGMLG ++ +++GS LD NAK WRL A +P++P F V +L++ GVA GATRAALT H A +N Sbjct: 69 SGLRSVLLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVKDSTGMLGRIILAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYPIFFTMTVSTSNLAKCIVGVAGGATRAALTMHQARRN 220
BLAST of CX295725 vs. ExPASy Swiss-Prot
Match: U420_DICDI (UPF0420 protein OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.162e-31 Identity = 77/207 (37.20%), Postives = 120/207 (57.97%), Query Frame = 3 Query: 75 GISEVAKSKQQLIIEEWNGSSSTKLFKTATIFAS--PSLSIHRSGSRFTHVWSRVLQAFVPEGFPGSVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVLFTFYQGSNLDSNAKMWRLVAXXXXXXXXXXXXXSPLFPS-AFAFVVCLGSLSRSFTGVASGATRAALTQHFALQNML 686 G S+ + +K IIE+ +S F+ A+ + L+ + + + ++ + + F+P G+P SVT DY +Q WDS+Q L + I L+T+A+L GVG+ SATV AT QW +RD GM+G ++F + +G++LD N+K WR A SPLF S F + C+G +++S GVA G T+A+LTQHFA ++ L Sbjct: 5 GKSQQSINKINCIIEKNQSNSIINKFQVASPYDDYDDRLNFLETIEKNSGFYNVLCELFLPNGYPDSVTTDYFGYQFWDSIQALCSTITGTLATRAILKGYGVGDSSATVASATTQWLIRDGMGMIGRIVFAWRKGTDLDCNSKKWRYTADILNNIGMAFEMISPLFSSQLFLPLSCIGLIAKSICGVAGGCTKASLTQHFAKRDNL 211
BLAST of CX295725 vs. ExPASy Swiss-Prot
Match: CP058_RAT (UPF0420 protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.162e-31 Identity = 65/152 (42.76%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 225 SRVLQAFVPEGFPGSVTPDYVPFQVWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVLFTFYQGSNLDSNAKMWRLVAXXXXXXXXXXXXXSPLFPSAFAFVVCLGSLSRSFTGVASGATRAALTQHFALQN 680 S + +P+GFP SV+PDY+ +Q+WDS+Q ++ + L+TQA+L +GVG A+V AT W ++D TGMLG ++F +++GS LD NAK WRL A +P++P F V +L++ GVA GATRAALT H A +N Sbjct: 69 SGLRSVLLPQGFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVKDSTGMLGRIIFAWWKGSKLDCNAKQWRLFADILNDTAMFLEIMAPMYPIFFTMTVSTSNLAKCIVGVAGGATRAALTMHQARRN 220 The following BLAST results are available for this feature:
BLAST of CX295725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295725 ID=CX295725; Name=CX295725; organism=Citrus clementina; type=EST; length=710bpback to top |