CX295729

Overview
NameCX295729
Unique NameCX295729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: CTR1_ARATH (Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.383e-26
Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = 1
Query:  292 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGA---LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            GT   A W G+ VAVK L E+ F  E +V  F+ E+A+++++RHPN+V F+GAVTQ   + IVTEYL +G L   L + GA   L     +  A D+A+GMNYLH NR   I+HRDL+  N+L D    +KV DFGLS
Sbjct:  563 GTVHRAEWHGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 698          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23
Identity = 77/208 (37.02%), Postives = 110/208 (52.88%), Query Frame = 1
Query:  100 EDRWGSTPLADAVYYKHHDVIKLLEEHGAKPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKG----TFRIASWRGTQVAVKTLGEEVFTDEDKVKAFID---ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDL-RAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSS 699
            + +   +P    V   +++ I+  ++H     T P  +    +  E+E+   E+       I +G     FR  SWRGT+VAVK L    F D   +K   D   E+ LL K+RHPN+V F+GA T+ +   IVTEYL +G L    L +   +   L ++   D ARGM YLH   P  IIHRDL+  N+L DDS  +KVADFGL++
Sbjct:  798 QQQQNGSPQQPHVNNNNNNNIQQNKDHQFPVPTIPAKIIEVEKPFEWEVPLSEIAIG--ARIGRGGYGQVFR-GSWRGTEVAVKML----FNDNVNLKLISDLRKEVDLLCKLRHPNIVLFMGACTEPSSPCIVTEYLSRGSLANILLDESIEMDWGLRLQLGFDCARGMTYLHSRNP-IIIHRDLKTDNLLVDDSWQVKVADFGLAT 997          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: DRKA_DICDI (Probable serine/threonine-protein kinase drkA OS=Dictyostelium discoideum GN=drkA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.479e-23
Identity = 64/158 (40.51%), Postives = 98/158 (62.03%), Query Frame = 1
Query:  247 DPKELDFSN---SVEITKGTFR---IASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG-ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSS 699
            D K++D       V I KG +    + +WRG+QVAVK L      +E+ +K F  E+ L++ +RHPNV+QFLG+      + I TEY+P+G L + L  +   L+ +L +K  +D A+G+ YLH + P  I+HRDL+  N+L D++  +KVADFGLS+
Sbjct:  365 DGKDIDIHQIKIGVRIGKGNYGEVYLGTWRGSQVAVKKLPAHNI-NENILKEFHREINLMKNLRHPNVIQFLGSCLIPPDICICTEYMPRGSLYSILHDQALQLQWSLLIKMMIDAAKGVIYLHNSTP-VILHRDLKSHNLLVDENWKVKVADFGLST 520          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y9853_DICDI (Probable serine/threonine-protein kinase DDB_G0271538 OS=Dictyostelium discoideum GN=DDB_G0271538 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23
Identity = 70/166 (42.17%), Postives = 96/166 (57.83%), Query Frame = 1
Query:  235 EYEIDPKELDFSN---SVEITKGTF---RIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGA--LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSG----HLKVADFGLS 696
            E E D   LD+S+    VEI +G+F   + AS+ GT VAVK L   V  D D  K  + E+ +L+ +RHPN+VQ++GA       MIVTEY+  GDL  ++K +G   +  TL +K ALDIA   +YLH  +   +I RDL+  NIL D+ G      KV DFG +
Sbjct:   20 EDENDFSSLDYSDLFMDVEIGRGSFGQVQKASYFGTDVAVKQLSTLVSIDPDYFKFMLREIKILKGMRHPNIVQYIGACCHEGRYMIVTEYIKGGDLHQFIKARGVSNISWTLRMKLALDIASAFSYLHSKK---VIFRDLKAKNILVDEIGDGLYRAKVIDFGFA 182          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y9871_DICDI (Probable serine/threonine-protein kinase DDB_G0271682 OS=Dictyostelium discoideum GN=DDB_G0271682 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.640e-23
Identity = 59/132 (44.70%), Postives = 88/132 (66.67%), Query Frame = 1
Query:  313 WRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL--KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            W+GT VAVKT+ + +   +DK + F  E+++L+ +RHPNVV F+G    +  + I+TEYL +G LR  L    K  L  ++ VK  +D+A+GMNYLH   P  IIHRDL+  N+L D++ ++KV+DFGLS +
Sbjct:  379 WKGTPVAVKTIFKSLLR-KDKKEEFEKEVSILKCLRHPNVVLFMGTCLLNGNLAIITEYLNRGSLRDVLTTMNKSELSLSVKVKMLIDVAQGMNYLHTYSP-PIIHRDLKSLNLLVDNNFNVKVSDFGLSRF 508          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: DRKB_DICDI (Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.640e-23
Identity = 65/158 (41.14%), Postives = 98/158 (62.03%), Query Frame = 1
Query:  247 DPKELDFSN---SVEITKGTFR---IASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSS 699
            D K++D       V I KG F    + +WRG+QVAVK L      +E+ +K F  E+ L++ +RHPNV+QFLG+   S  + I TEY+P+G L + L  +K  +  +L  +  +D A+G+ YLH + P  I+HRDL+  N+L D++  +KVADFGLS+
Sbjct:  382 DGKDIDTQQIKIGVRIGKGNFGEVYLGTWRGSQVAVKKLPAHNI-NENILKEFHREINLMKNLRHPNVIQFLGSCLISPDICICTEYMPRGSLYSILHNEKIKISWSLVKRMMIDAAKGIIYLHGSTP-VILHRDLKSHNLLVDENWKVKVADFGLST 537          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: 7TMK1_DICDI (Seven transmembrane domain-containing tyrosine-protein kinase 1 OS=Dictyostelium discoideum GN=7tmk1 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.702e-22
Identity = 66/142 (46.48%), Postives = 84/142 (59.15%), Query Frame = 1
Query:  292 GTFRIASWRGTQVAVKTLGEEVFTDEDKVK---AFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGAL---KPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHL-KVADFGLS 696
            G  R A W+G  VAVK L    F + D  K    F+ E+A+L  +RHPNV+QFLG  +++    IVTEY+  G L   L  +  L    P LA   A+ IARGM YLH+ +P  I+HRDL   NIL D+S  + KVADFGLS
Sbjct:  375 GEVRKAVWKGAVVAVKILHRNSFRNTDGNKEENVFLKEVAILSILRHPNVLQFLGVCSETNLNGIVTEYMGGGSLDRLLTDRYFLIKQNPILAWNMAISIARGMFYLHDWKPNPILHRDLSTKNILLDESLTIAKVADFGLS 516          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: PYK1_DICDI (Dual specificity protein kinase pyk1 OS=Dictyostelium discoideum GN=splA PE=1 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22
Identity = 73/175 (41.71%), Postives = 94/175 (53.71%), Query Frame = 1
Query:  235 EYEIDPKELDFSNSVEITKGTF---RIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQ--STPMMIVTEYLPKGDLRAYLKQKGAL---KPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRD-------------DSGHLKVADFGLS 696
            EYEID  EL+F  +  I KG F   +   WR T VA+K +  + F  +  +  F +E+ +L K+RHPNVVQFLGA T        IVTE++  G LR +L     L    P + +K ALDIA+GMNYLH   P  I+HRDL   NIL D                  K++DFGLS
Sbjct: 2107 EYEIDFNELEFGQT--IGKGFFGEVKRGYWRETDVAIKIIYRDQFKTKSSLVMFQNEVGILSKLRHPNVVQFLGACTAGGEDHHCIVTEWMGGGSLRQFLTDHFNLLEQNPHIRLKLALDIAKGMNYLHGWTP-PILHRDLSSRNILLDHNIDPKNPVVSSRQDIKCKISDFGLS 2278          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: SHKB_DICDI (Dual specificity protein kinase shkB OS=Dictyostelium discoideum GN=shkB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21
Identity = 61/170 (35.88%), Postives = 100/170 (58.82%), Query Frame = 1
Query:  214 QNAREVPEYEIDPKELDFSNSVEITKGTFRIASW---RGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIAR----GMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            ++  E+  +EID  E+ ++   ++  G F        RG +VA+K L + VF +E+ +  F  E++L+ K+R+P+++ F+GA T    + IVTE +PKG + + L+ K      +  K A+ IAR    GM +LH +    I+H DL+P+N+L D +  +KVADFGLS Y
Sbjct:  157 RDEEEIIRWEIDRNEISYNREAKLGSGAFGSVYKGIVRGKEVAIKKLTQTVF-EENTMNEFKKEVSLMAKLRNPHLLLFMGACTAPEDLSIVTELMPKGSVHSLLRAKEDTSDFITFKRAILIARDTVLGMTWLHASN---ILHLDLKPANLLVDQNWVVKVADFGLSKY 322          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: TEC_HUMAN (Tyrosine-protein kinase Tec OS=Homo sapiens GN=TEC PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21
Identity = 68/196 (34.69%), Postives = 103/196 (52.55%), Query Frame = 1
Query:  139 YYKHHD---VIKLLEEHGAKPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKGTF---RIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            Y+KH+    V +L      K   AP     + E  ++EI+P EL F    E+  G F   R+  WR   +VA+K + E    +ED    FI+E  ++ K+ HP +VQ  G  TQ  P+ IVTE++ +G L  +L+Q+ G     + +    D+  GM YL  N   + IHRDL   N L  ++G +KV+DFG++ Y
Sbjct:  329 YHKHNAAGLVTRLRYPVSVKGKNAPTTAGFSYE--KWEINPSELTFMR--ELGSGLFGVVRLGKWRAQYKVAIKAIREGAMCEED----FIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDVLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSEAGVVKVSDFGMARY 513          
The following BLAST results are available for this feature:
BLAST of CX295729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CTR1_ARATH7.383e-2647.83Serine/threonine-protein kinase CTR1 OS=Arabidopsi... [more]
DRKD_DICDI2.011e-2337.02Probable serine/threonine-protein kinase drkD OS=D... [more]
DRKA_DICDI4.479e-2340.51Probable serine/threonine-protein kinase drkA OS=D... [more]
Y9853_DICDI5.850e-2342.17Probable serine/threonine-protein kinase DDB_G0271... [more]
Y9871_DICDI7.640e-2344.70Probable serine/threonine-protein kinase DDB_G0271... [more]
DRKB_DICDI7.640e-2341.14Probable serine/threonine-protein kinase drkB OS=D... [more]
7TMK1_DICDI1.702e-2246.48Seven transmembrane domain-containing tyrosine-pro... [more]
PYK1_DICDI3.792e-2241.71Dual specificity protein kinase pyk1 OS=Dictyostel... [more]
SHKB_DICDI2.458e-2135.88Dual specificity protein kinase shkB OS=Dictyostel... [more]
TEC_HUMAN4.192e-2134.69Tyrosine-protein kinase Tec OS=Homo sapiens GN=TEC... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05075C07SK DroRLeaf1 Citrus clementina cDNA clone C05075C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295729 ID=CX295729; Name=CX295729; organism=Citrus clementina; type=EST; length=718bp
CCGTGACATCGATAACGCACCGCTTTGCATGTTGCCGCTTGTCAGGGAAG
GACTGATGTTGTACGGCTGTTGCTCAGCCGTGGAGCTGACGTGGATCCTG
AAGACCGCTGGGGCAGCACTCCTCTTGCAGATGCGGTGTATTACAAGCAC
CACGACGTGATCAAACTTTTGGAGGAACATGGTGCAAAGCCTTCAACAGC
TCCCATGCATGTTCAAAATGCTCGTGAAGTCCCAGAGTACGAAATTGATC
CTAAAGAGCTCGATTTTTCCAACAGTGTTGAGATTACAAAGGGAACTTTT
CGGATTGCATCATGGCGTGGAACACAAGTTGCTGTGAAAACACTTGGAGA
GGAAGTTTTCACTGATGAGGATAAAGTGAAGGCATTCATTGACGAGCTTG
CATTACTTCAGAAAATTCGTCATCCAAATGTTGTCCAGTTTTTGGGTGCT
GTAACCCAAAGCACTCCAATGATGATTGTCACAGAATATTTACCCAAGGG
AGATCTCCGTGCATATCTGAAGCAAAAGGGTGCATTAAAGCCCACACTAG
CTGTGAAGTTCGCTCTTGACATTGCTAGGGGAATGAATTATTTGCATGAA
AACAGACCTGAAGCAATAATTCATCGGGATCTTGAGCCTTCAAATATACT
GCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGACTCAGCAGCT
ACTGAAATTTGCAATACA
back to top